RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 ABCA2Q9BZC7 2435 aa18.17■□□□□ 0.5
HMGB3-205ENST00000455596 HPXP02790 462 aa18.17■□□□□ 0.5
HMGB3-205ENST00000455596 TACSTD2P09758 323 aa18.17■□□□□ 0.5
HMGB3-205ENST00000455596 RPS6KA3P51812 740 aa18.17■□□□□ 0.5
HMGB3-205ENST00000455596 MOGQ16653 247 aa18.17■□□□□ 0.5
HMGB3-205ENST00000455596 FAM166AQ6J272 317 aa18.17■□□□□ 0.5
HMGB3-205ENST00000455596 THSD4Q6ZMP0 1018 aa18.17■□□□□ 0.5
HMGB3-205ENST00000455596 DPY19L2P2Q6ZN68 376 aa18.17■□□□□ 0.5
HMGB3-205ENST00000455596 RDH5Q92781 318 aa18.17■□□□□ 0.5
HMGB3-205ENST00000455596 MSI2Q96DH6 328 aaKnown RBP18.17■□□□□ 0.5
HMGB3-205ENST00000455596 CCT8L2Q96SF2 557 aa18.17■□□□□ 0.5
HMGB3-205ENST00000455596 CHODLQ9H9P2 273 aa18.17■□□□□ 0.5
HMGB3-205ENST00000455596 IL20RAQ9UHF4 553 aa18.17■□□□□ 0.5
HMGB3-205ENST00000455596 CDC42EP3Q9UKI2 254 aa18.17■□□□□ 0.5
HMGB3-205ENST00000455596 IER3IP1Q9Y5U9 82 aa18.17■□□□□ 0.5
HMGB3-205ENST00000455596 LOC100289279A0A1B0GTE1 492 aa18.16■□□□□ 0.5
HMGB3-205ENST00000455596 LRP5LA4QPB2 252 aa18.16■□□□□ 0.5
HMGB3-205ENST00000455596 C17orf100A8MU93 164 aa18.16■□□□□ 0.5
HMGB3-205ENST00000455596 SOCS2O14508 198 aa18.16■□□□□ 0.5
HMGB3-205ENST00000455596 LMX1BO60663 402 aa18.16■□□□□ 0.5
HMGB3-205ENST00000455596 SCG5P05408 212 aa18.16■□□□□ 0.5
HMGB3-205ENST00000455596 WNT5AP41221 380 aa18.16■□□□□ 0.5
HMGB3-205ENST00000455596 FXYD6P3P58550 94 aa18.16■□□□□ 0.5
HMGB3-205ENST00000455596 ZNF718Q3SXZ3 478 aa18.16■□□□□ 0.5
HMGB3-205ENST00000455596 ZNF774Q6NX45 483 aa18.16■□□□□ 0.5
HMGB3-205ENST00000455596 TMEM154Q6P9G4 183 aa18.16■□□□□ 0.5
HMGB3-205ENST00000455596 SMARCD3Q6STE5 483 aa18.16■□□□□ 0.5
HMGB3-205ENST00000455596 ADCK1Q86TW2 530 aa18.16■□□□□ 0.5
HMGB3-205ENST00000455596 C1orf174Q8IYL3 243 aa18.16■□□□□ 0.5
HMGB3-205ENST00000455596 ZNF101Q8IZC7 436 aa18.16■□□□□ 0.5
HMGB3-205ENST00000455596 FITM2Q8N6M3 262 aa18.16■□□□□ 0.5
HMGB3-205ENST00000455596 SYT4Q9H2B2 425 aa18.16■□□□□ 0.5
HMGB3-205ENST00000455596 EMC7Q9NPA0 242 aa18.16■□□□□ 0.5
HMGB3-205ENST00000455596 IL1RAPQ9NPH3 570 aa18.16■□□□□ 0.5
HMGB3-205ENST00000455596 HINT3Q9NQE9 182 aaKnown RBP18.16■□□□□ 0.5
HMGB3-205ENST00000455596 KCNS2Q9ULS6 477 aa18.16■□□□□ 0.5
HMGB3-205ENST00000455596 SLC16A7O60669 478 aa18.15■□□□□ 0.5
HMGB3-205ENST00000455596 LILRA1O75019 489 aa18.15■□□□□ 0.5
HMGB3-205ENST00000455596 KHDRBS3O75525 346 aaKnown RBP18.15■□□□□ 0.5
HMGB3-205ENST00000455596 MT-ND5P03915 603 aa18.15■□□□□ 0.5
HMGB3-205ENST00000455596 CTLA4P16410 223 aa18.15■□□□□ 0.5
HMGB3-205ENST00000455596 ACHEP22303 614 aa18.15■□□□□ 0.5
HMGB3-205ENST00000455596 COL8A2P25067 703 aa18.15■□□□□ 0.5
HMGB3-205ENST00000455596 GCH1P30793 250 aa18.15■□□□□ 0.5
HMGB3-205ENST00000455596 RRM2P31350 389 aa18.15■□□□□ 0.5
HMGB3-205ENST00000455596 SCRN3Q0VDG4 424 aa18.15■□□□□ 0.5
HMGB3-205ENST00000455596 UGT2A3Q6UWM9 527 aa18.15■□□□□ 0.5
HMGB3-205ENST00000455596 ZER1Q7Z7L7 766 aa18.15■□□□□ 0.5
HMGB3-205ENST00000455596 ZDHHC21Q8IVQ6 265 aa18.15■□□□□ 0.5
HMGB3-205ENST00000455596 GPA33Q99795 319 aa18.15■□□□□ 0.5
HMGB3-205ENST00000455596 RERGLQ9H628 205 aa18.15■□□□□ 0.5
HMGB3-205ENST00000455596 VSX1Q9NZR4 365 aaPredicted RBP18.15■□□□□ 0.5
HMGB3-205ENST00000455596 LPAR3Q9UBY5 353 aa18.15■□□□□ 0.5
HMGB3-205ENST00000455596 NDRG4Q9ULP0 352 aaKnown RBP18.15■□□□□ 0.5
HMGB3-205ENST00000455596 TMCC3Q9ULS5 477 aa18.15■□□□□ 0.5
HMGB3-205ENST00000455596 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.14■□□□□ 0.493e-8■■■■■ 32.7
HMGB3-205ENST00000455596 B2RBV5 119 aa18.14■□□□□ 0.49
HMGB3-205ENST00000455596 OR10H3O60404 316 aa18.14■□□□□ 0.49
HMGB3-205ENST00000455596 NCR1O76036 304 aa18.14■□□□□ 0.49
HMGB3-205ENST00000455596 TXNDC12O95881 172 aa18.14■□□□□ 0.49
HMGB3-205ENST00000455596 FAM107AO95990 144 aa18.14■□□□□ 0.49
HMGB3-205ENST00000455596 IFNA2P01563 188 aa18.14■□□□□ 0.49
HMGB3-205ENST00000455596 IGHV3-13P01766 116 aa18.14■□□□□ 0.49
HMGB3-205ENST00000455596 COX5BP10606 129 aa18.14■□□□□ 0.49
HMGB3-205ENST00000455596 IFNGR2P38484 337 aa18.14■□□□□ 0.49
HMGB3-205ENST00000455596 MAGEB1P43366 347 aa18.14■□□□□ 0.49
HMGB3-205ENST00000455596 MRPS11P82912 194 aaKnown RBP18.14■□□□□ 0.49
HMGB3-205ENST00000455596 TRIP10Q15642 601 aa18.14■□□□□ 0.49
HMGB3-205ENST00000455596 PCGF3Q3KNV8 242 aa18.14■□□□□ 0.49
HMGB3-205ENST00000455596 ABHD4Q8TB40 342 aa18.14■□□□□ 0.49
HMGB3-205ENST00000455596 SLC25A40Q8TBP6 338 aa18.14■□□□□ 0.49
HMGB3-205ENST00000455596 FANK1Q8TC84 345 aa18.14■□□□□ 0.49
HMGB3-205ENST00000455596 HPS1Q92902 700 aa18.14■□□□□ 0.49
HMGB3-205ENST00000455596 MARS2Q96GW9 593 aaKnown RBP18.14■□□□□ 0.49
HMGB3-205ENST00000455596 NSL1Q96IY1 281 aa18.14■□□□□ 0.49
HMGB3-205ENST00000455596 SNX18Q96RF0 628 aa18.14■□□□□ 0.49
HMGB3-205ENST00000455596 BEX2Q9BXY8 128 aa18.14■□□□□ 0.49
HMGB3-205ENST00000455596 SHARPINQ9H0F6 387 aa18.14■□□□□ 0.49
HMGB3-205ENST00000455596 ELOVL3Q9HB03 270 aa18.14■□□□□ 0.49
HMGB3-205ENST00000455596 ACTR3BQ9P1U1 418 aa18.14■□□□□ 0.49
HMGB3-205ENST00000455596 COA3Q9Y2R0 106 aaPredicted RBP18.14■□□□□ 0.49
HMGB3-205ENST00000455596 TANC2Q9HCD6 1990 aa18.13■□□□□ 0.49
HMGB3-205ENST00000455596 DYNC1I1O14576 645 aa18.13■□□□□ 0.49
HMGB3-205ENST00000455596 DOK2O60496 412 aa18.13■□□□□ 0.49
HMGB3-205ENST00000455596 ICMTO60725 284 aa18.13■□□□□ 0.49
HMGB3-205ENST00000455596 PPP1R3DO95685 299 aa18.13■□□□□ 0.49
HMGB3-205ENST00000455596 TGFAP01135 160 aa18.13■□□□□ 0.49
HMGB3-205ENST00000455596 FPR3P25089 353 aa18.13■□□□□ 0.49
HMGB3-205ENST00000455596 SLC6A6P31641 620 aa18.13■□□□□ 0.49
HMGB3-205ENST00000455596 GPR6P46095 362 aaPredicted RBP18.13■□□□□ 0.49
HMGB3-205ENST00000455596 ARHGDIAP52565 204 aa18.13■□□□□ 0.49
HMGB3-205ENST00000455596 PPP1CBP62140 327 aa18.13■□□□□ 0.49
HMGB3-205ENST00000455596 GLO1Q04760 184 aa18.13■□□□□ 0.49
HMGB3-205ENST00000455596 AQP6Q13520 282 aa18.13■□□□□ 0.49
HMGB3-205ENST00000455596 RFX4Q33E94 735 aa18.13■□□□□ 0.49
HMGB3-205ENST00000455596 SPATA46Q5T0L3 261 aa18.13■□□□□ 0.49
HMGB3-205ENST00000455596 MBNL2Q5VZF2 373 aaKnown RBP18.13■□□□□ 0.49
HMGB3-205ENST00000455596 ARL9Q6T311 187 aa18.13■□□□□ 0.49
HMGB3-205ENST00000455596 CYP2R1Q6VVX0 501 aa18.13■□□□□ 0.49
HMGB3-205ENST00000455596 PTCHD4Q6ZW05 846 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms