RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 SSTR2P30874 369 aa12.46□□□□□ -0.41
HMGXB4-204ENST00000455359 HSPA13P48723 471 aa12.46□□□□□ -0.41
HMGXB4-204ENST00000455359 OCLNQ16625 522 aa12.46□□□□□ -0.41
HMGXB4-204ENST00000455359 PCK2Q16822 640 aa12.46□□□□□ -0.41
HMGXB4-204ENST00000455359 NCMAPQ5T1S8 102 aa12.46□□□□□ -0.41
HMGXB4-204ENST00000455359 MEPCEQ7L2J0 689 aaKnown RBP12.46□□□□□ -0.41
HMGXB4-204ENST00000455359 LRRC18Q8N456 261 aa12.46□□□□□ -0.41
HMGXB4-204ENST00000455359 SETD9Q8NE22 299 aa12.46□□□□□ -0.41
HMGXB4-204ENST00000455359 GJC3Q8NFK1 279 aa12.46□□□□□ -0.41
HMGXB4-204ENST00000455359 OR6K6Q8NGW6 343 aa12.46□□□□□ -0.41
HMGXB4-204ENST00000455359 IPCEF1Q8WWN9 437 aaPredicted RBP12.46□□□□□ -0.41
HMGXB4-204ENST00000455359 Q96MT0 163 aa12.46□□□□□ -0.41
HMGXB4-204ENST00000455359 ZNF75AQ96N20 296 aa12.46□□□□□ -0.41
HMGXB4-204ENST00000455359 IL4I1Q96RQ9 567 aa12.46□□□□□ -0.41
HMGXB4-204ENST00000455359 TEAD3Q99594 435 aa12.46□□□□□ -0.41
HMGXB4-204ENST00000455359 ADI1Q9BV57 179 aa12.46□□□□□ -0.41
HMGXB4-204ENST00000455359 CDADC1Q9BWV3 514 aa12.46□□□□□ -0.41
HMGXB4-204ENST00000455359 RNF121Q9H920 327 aa12.46□□□□□ -0.41
HMGXB4-204ENST00000455359 EMC7Q9NPA0 242 aa12.46□□□□□ -0.41
HMGXB4-204ENST00000455359 MRPL22Q9NWU5 206 aaKnown RBP12.46□□□□□ -0.41
HMGXB4-204ENST00000455359 HAO2Q9NYQ3 351 aa12.46□□□□□ -0.41
HMGXB4-204ENST00000455359 NPAP1Q9NZP6 1156 aa12.46□□□□□ -0.41
HMGXB4-204ENST00000455359 WARS2Q9UGM6 360 aaKnown RBP12.46□□□□□ -0.41
HMGXB4-204ENST00000455359 CYB5R1Q9UHQ9 305 aa12.46□□□□□ -0.41
HMGXB4-204ENST00000455359 ATPIF1Q9UII2 106 aa12.46□□□□□ -0.41
HMGXB4-204ENST00000455359 POLR1DQ9Y2S0 133 aa12.46□□□□□ -0.41
HMGXB4-204ENST00000455359 HSPE1-MOB4S4R3N1 261 aa12.46□□□□□ -0.41
HMGXB4-204ENST00000455359 UTP20O75691 2785 aaKnown RBP12.45□□□□□ -0.42
HMGXB4-204ENST00000455359 IQCMA0A1B0GVH7 501 aa12.45□□□□□ -0.42
HMGXB4-204ENST00000455359 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.45□□□□□ -0.42
HMGXB4-204ENST00000455359 A0A1W2PR80 420 aa12.45□□□□□ -0.42
HMGXB4-204ENST00000455359 ZNF503-AS2A6NEH8 195 aa12.45□□□□□ -0.42
HMGXB4-204ENST00000455359 FAM171A2A8MVW0 826 aa12.45□□□□□ -0.42
HMGXB4-204ENST00000455359 SCG5P05408 212 aa12.45□□□□□ -0.42
HMGXB4-204ENST00000455359 COX5BP10606 129 aa12.45□□□□□ -0.42
HMGXB4-204ENST00000455359 CLUP10909 449 aa12.45□□□□□ -0.42
HMGXB4-204ENST00000455359 ZNF32P17041 273 aa12.45□□□□□ -0.42
HMGXB4-204ENST00000455359 CD40P25942 277 aa12.45□□□□□ -0.42
HMGXB4-204ENST00000455359 CAPGP40121 348 aa12.45□□□□□ -0.42
HMGXB4-204ENST00000455359 ENTPD1P49961 510 aa12.45□□□□□ -0.42
HMGXB4-204ENST00000455359 ZNF83P51522 516 aa12.45□□□□□ -0.42
HMGXB4-204ENST00000455359 TUBA1BP68363 451 aa12.45□□□□□ -0.42
HMGXB4-204ENST00000455359 TUBA4AP68366 448 aa12.45□□□□□ -0.42
HMGXB4-204ENST00000455359 ADARB1P78563 741 aaKnown RBP12.45□□□□□ -0.42
HMGXB4-204ENST00000455359 PIGFQ07326 219 aa12.45□□□□□ -0.42
HMGXB4-204ENST00000455359 GGTLC2Q14390 218 aa12.45□□□□□ -0.42
HMGXB4-204ENST00000455359 KLHL12Q53G59 568 aa12.45□□□□□ -0.42
HMGXB4-204ENST00000455359 UGT2A3Q6UWM9 527 aa12.45□□□□□ -0.42
HMGXB4-204ENST00000455359 TUBA1AQ71U36 451 aa12.45□□□□□ -0.42
HMGXB4-204ENST00000455359 ZNF454Q8N9F8 522 aa12.45□□□□□ -0.42
HMGXB4-204ENST00000455359 OR51L1Q8NGJ5 315 aa12.45□□□□□ -0.42
HMGXB4-204ENST00000455359 OR1J2Q8NGS2 313 aa12.45□□□□□ -0.42
HMGXB4-204ENST00000455359 OR2AJ1Q8NGZ0 328 aa12.45□□□□□ -0.42
HMGXB4-204ENST00000455359 RHOXF1Q8NHV9 184 aa12.45□□□□□ -0.42
HMGXB4-204ENST00000455359 ZNRF4Q8WWF5 429 aa12.45□□□□□ -0.42
HMGXB4-204ENST00000455359 FBXO17Q96EF6 278 aa12.45□□□□□ -0.42
HMGXB4-204ENST00000455359 INTS14Q96SY0 518 aa12.45□□□□□ -0.42
HMGXB4-204ENST00000455359 OR2H1Q9GZK4 316 aa12.45□□□□□ -0.42
HMGXB4-204ENST00000455359 MED20Q9H944 212 aa12.45□□□□□ -0.42
HMGXB4-204ENST00000455359 ASH2LQ9UBL3 628 aa12.45□□□□□ -0.42
HMGXB4-204ENST00000455359 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.45□□□□□ -0.42
HMGXB4-204ENST00000455359 COMMD3-BMI1R4GMX3 469 aa12.45□□□□□ -0.42
HMGXB4-204ENST00000455359 HCFC1P51610 2035 aa12.44□□□□□ -0.42
HMGXB4-204ENST00000455359 IGHV1-18A0A0C4DH31 117 aa12.44□□□□□ -0.42
HMGXB4-204ENST00000455359 DPRXA6NFQ7 191 aa12.44□□□□□ -0.42
HMGXB4-204ENST00000455359 CTAG2O75638 210 aa12.44□□□□□ -0.42
HMGXB4-204ENST00000455359 MPZL1O95297 269 aa12.44□□□□□ -0.42
HMGXB4-204ENST00000455359 CRYAAP02489 173 aa12.44□□□□□ -0.42
HMGXB4-204ENST00000455359 GYPBP06028 91 aa12.44□□□□□ -0.42
HMGXB4-204ENST00000455359 CD3EP07766 207 aa12.44□□□□□ -0.42
HMGXB4-204ENST00000455359 ZNF14P17017 642 aaPredicted RBP12.44□□□□□ -0.42
HMGXB4-204ENST00000455359 GABRB1P18505 474 aa12.44□□□□□ -0.42
HMGXB4-204ENST00000455359 COL8A1P27658 744 aa12.44□□□□□ -0.42
HMGXB4-204ENST00000455359 HTR1FP30939 366 aa12.44□□□□□ -0.42
HMGXB4-204ENST00000455359 VHLP40337 213 aa12.44□□□□□ -0.42
HMGXB4-204ENST00000455359 RPS7P62081 194 aaKnown RBP12.44□□□□□ -0.42
HMGXB4-204ENST00000455359 HIST1H3AP68431 136 aa12.44□□□□□ -0.42
HMGXB4-204ENST00000455359 ADAM8P78325 824 aa12.44□□□□□ -0.42
HMGXB4-204ENST00000455359 PSG4Q00888 419 aa12.44□□□□□ -0.42
HMGXB4-204ENST00000455359 ECH1Q13011 328 aa12.44□□□□□ -0.42
HMGXB4-204ENST00000455359 APOFQ13790 326 aa12.44□□□□□ -0.42
HMGXB4-204ENST00000455359 PABPC1L2AQ5JQF8 200 aa12.44□□□□□ -0.42
HMGXB4-204ENST00000455359 HIST2H3PS2Q5TEC6 136 aa12.44□□□□□ -0.42
HMGXB4-204ENST00000455359 ALKBH2Q6NS38 261 aa12.44□□□□□ -0.42
HMGXB4-204ENST00000455359 HIST2H3AQ71DI3 136 aa12.44□□□□□ -0.42
HMGXB4-204ENST00000455359 SHFQ7M4L6 423 aa12.44□□□□□ -0.42
HMGXB4-204ENST00000455359 TIGD4Q8IY51 512 aa12.44□□□□□ -0.42
HMGXB4-204ENST00000455359 ZNF511Q8NB15 262 aa12.44□□□□□ -0.42
HMGXB4-204ENST00000455359 BBS1Q8NFJ9 593 aa12.44□□□□□ -0.42
HMGXB4-204ENST00000455359 FGFBP3Q8TAT2 258 aa12.44□□□□□ -0.42
HMGXB4-204ENST00000455359 CYGBQ8WWM9 190 aa12.44□□□□□ -0.42
HMGXB4-204ENST00000455359 TFAP2CQ92754 450 aa12.44□□□□□ -0.42
HMGXB4-204ENST00000455359 MARVELD3Q96A59 401 aa12.44□□□□□ -0.42
HMGXB4-204ENST00000455359 PLPPR2Q96GM1 343 aa12.44□□□□□ -0.42
HMGXB4-204ENST00000455359 MNTQ99583 582 aa12.44□□□□□ -0.42
HMGXB4-204ENST00000455359 TMEM204Q9BSN7 226 aa12.44□□□□□ -0.42
HMGXB4-204ENST00000455359 YIPF3Q9GZM5 350 aa12.44□□□□□ -0.42
HMGXB4-204ENST00000455359 RASSF1Q9NS23 344 aa12.44□□□□□ -0.42
HMGXB4-204ENST00000455359 LHFPL6Q9Y693 200 aa12.44□□□□□ -0.42
HMGXB4-204ENST00000455359 CCDC182A6NF36 153 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms