RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 RAD52P43351 418 aa12.48□□□□□ -0.41
HSPG2-207ENST00000453796 ALDH3B1P43353 468 aa12.48□□□□□ -0.41
HSPG2-207ENST00000453796 RPS6KA3P51812 740 aa12.48□□□□□ -0.41
HSPG2-207ENST00000453796 PCBD1P61457 104 aa12.48□□□□□ -0.41
HSPG2-207ENST00000453796 PPP2R2BQ00005 443 aa12.48□□□□□ -0.41
HSPG2-207ENST00000453796 MAD2L1BPQ15013 274 aaPredicted RBP12.48□□□□□ -0.41
HSPG2-207ENST00000453796 RFX4Q33E94 735 aa12.48□□□□□ -0.41
HSPG2-207ENST00000453796 PGBD2Q6P3X8 592 aa12.48□□□□□ -0.41
HSPG2-207ENST00000453796 ADCK1Q86TW2 530 aa12.48□□□□□ -0.41
HSPG2-207ENST00000453796 ZNF101Q8IZC7 436 aa12.48□□□□□ -0.41
HSPG2-207ENST00000453796 ZNF786Q8N393 782 aa12.48□□□□□ -0.41
HSPG2-207ENST00000453796 OR4C15Q8NGM1 316 aa12.48□□□□□ -0.41
HSPG2-207ENST00000453796 FANK1Q8TC84 345 aa12.48□□□□□ -0.41
HSPG2-207ENST00000453796 BPESC1Q9GZL8 116 aa12.48□□□□□ -0.41
HSPG2-207ENST00000453796 LRMDAQ9H2I8 198 aa12.48□□□□□ -0.41
HSPG2-207ENST00000453796 OR51B6Q9H340 312 aa12.48□□□□□ -0.41
HSPG2-207ENST00000453796 MAGIXQ9H6Y5 334 aa12.48□□□□□ -0.41
HSPG2-207ENST00000453796 EMC7Q9NPA0 242 aa12.48□□□□□ -0.41
HSPG2-207ENST00000453796 DUSP13Q9UII6 198 aa12.48□□□□□ -0.41
HSPG2-207ENST00000453796 TIMM10BQ9Y5J6 103 aa12.48□□□□□ -0.41
HSPG2-207ENST00000453796 C5orf49A4QMS7 147 aa12.47□□□□□ -0.41
HSPG2-207ENST00000453796 DCTN6O00399 190 aa12.47□□□□□ -0.41
HSPG2-207ENST00000453796 ARPC3O15145 178 aa12.47□□□□□ -0.41
HSPG2-207ENST00000453796 SLC16A7O60669 478 aa12.47□□□□□ -0.41
HSPG2-207ENST00000453796 KRT36O76013 467 aa12.47□□□□□ -0.41
HSPG2-207ENST00000453796 PPP1R3DO95685 299 aa12.47□□□□□ -0.41
HSPG2-207ENST00000453796 LCKP06239 509 aa12.47□□□□□ -0.41
HSPG2-207ENST00000453796 ERCC1P07992 297 aaPredicted RBP12.47□□□□□ -0.41
HSPG2-207ENST00000453796 IGHV4-31P0DP07 118 aa12.47□□□□□ -0.41
HSPG2-207ENST00000453796 TSPAN31Q12999 210 aa12.47□□□□□ -0.41
HSPG2-207ENST00000453796 RIN1Q13671 783 aa12.47□□□□□ -0.41
HSPG2-207ENST00000453796 TMEM255AQ5JRV8 349 aa12.47□□□□□ -0.41
HSPG2-207ENST00000453796 ELFN2Q5R3F8 820 aa12.47□□□□□ -0.41
HSPG2-207ENST00000453796 C6orf52Q5T4I8 152 aa12.47□□□□□ -0.41
HSPG2-207ENST00000453796 ZNF770Q6IQ21 691 aaPredicted RBP12.47□□□□□ -0.41
HSPG2-207ENST00000453796 ZNF774Q6NX45 483 aa12.47□□□□□ -0.41
HSPG2-207ENST00000453796 ZNF620Q6ZNG0 422 aa12.47□□□□□ -0.41
HSPG2-207ENST00000453796 DHFR2Q86XF0 187 aa12.47□□□□□ -0.41
HSPG2-207ENST00000453796 OR1J1Q8NGS3 322 aa12.47□□□□□ -0.41
HSPG2-207ENST00000453796 SYNPRQ8TBG9 265 aa12.47□□□□□ -0.41
HSPG2-207ENST00000453796 GNPDA2Q8TDQ7 276 aa12.47□□□□□ -0.41
HSPG2-207ENST00000453796 UBASH3BQ8TF42 649 aa12.47□□□□□ -0.41
HSPG2-207ENST00000453796 ERMAPQ96PL5 475 aaPredicted RBP12.47□□□□□ -0.41
HSPG2-207ENST00000453796 SNX18Q96RF0 628 aa12.47□□□□□ -0.41
HSPG2-207ENST00000453796 BTBD10Q9BSF8 475 aa12.47□□□□□ -0.41
HSPG2-207ENST00000453796 TRIM15Q9C019 465 aa12.47□□□□□ -0.41
HSPG2-207ENST00000453796 NUAK2Q9H093 628 aa12.47□□□□□ -0.41
HSPG2-207ENST00000453796 TMCC3Q9ULS5 477 aa12.47□□□□□ -0.41
HSPG2-207ENST00000453796 COA3Q9Y2R0 106 aaPredicted RBP12.47□□□□□ -0.41
HSPG2-207ENST00000453796 TANC2Q9HCD6 1990 aa12.47□□□□□ -0.41
HSPG2-207ENST00000453796 IGHV4-61A0A0C4DH41 118 aa12.46□□□□□ -0.41
HSPG2-207ENST00000453796 C12orf71A8MTZ7 269 aa12.46□□□□□ -0.41
HSPG2-207ENST00000453796 ACOT8O14734 319 aa12.46□□□□□ -0.41
HSPG2-207ENST00000453796 CRLF1O75462 422 aa12.46□□□□□ -0.41
HSPG2-207ENST00000453796 KHDRBS3O75525 346 aaKnown RBP12.46□□□□□ -0.41
HSPG2-207ENST00000453796 NCR1O76036 304 aa12.46□□□□□ -0.41
HSPG2-207ENST00000453796 MPZL1O95297 269 aa12.46□□□□□ -0.41
HSPG2-207ENST00000453796 IGHV3-13P01766 116 aa12.46□□□□□ -0.41
HSPG2-207ENST00000453796 HPXP02790 462 aa12.46□□□□□ -0.41
HSPG2-207ENST00000453796 COX5BP10606 129 aa12.46□□□□□ -0.41
HSPG2-207ENST00000453796 CCNOP22674 350 aa12.46□□□□□ -0.41
HSPG2-207ENST00000453796 SLC6A6P31641 620 aa12.46□□□□□ -0.41
HSPG2-207ENST00000453796 IFNGR2P38484 337 aa12.46□□□□□ -0.41
HSPG2-207ENST00000453796 GDI2P50395 445 aaKnown RBP12.46□□□□□ -0.41
HSPG2-207ENST00000453796 KLF3P57682 345 aaPredicted RBP12.46□□□□□ -0.41
HSPG2-207ENST00000453796 LSM6P62312 80 aaKnown RBP12.46□□□□□ -0.41
HSPG2-207ENST00000453796 KCNMB1Q16558 191 aa12.46□□□□□ -0.41
HSPG2-207ENST00000453796 CARTPTQ16568 116 aa12.46□□□□□ -0.41
HSPG2-207ENST00000453796 RFPL4BQ6ZWI9 263 aa12.46□□□□□ -0.41
HSPG2-207ENST00000453796 TRPM8Q7Z2W7 1104 aa12.46□□□□□ -0.41
HSPG2-207ENST00000453796 PRIMA1Q86XR5 153 aa12.46□□□□□ -0.41
HSPG2-207ENST00000453796 GLB1L2Q8IW92 636 aa12.46□□□□□ -0.41
HSPG2-207ENST00000453796 ALDH16A1Q8IZ83 802 aa12.46□□□□□ -0.41
HSPG2-207ENST00000453796 OR9Q2Q8NGE9 314 aa12.46□□□□□ -0.41
HSPG2-207ENST00000453796 BCAS4Q8TDM0 211 aa12.46□□□□□ -0.41
HSPG2-207ENST00000453796 C11orf40Q8WZ69 217 aa12.46□□□□□ -0.41
HSPG2-207ENST00000453796 ASB9Q96DX5 294 aa12.46□□□□□ -0.41
HSPG2-207ENST00000453796 MARS2Q96GW9 593 aaKnown RBP12.46□□□□□ -0.41
HSPG2-207ENST00000453796 CLPTM1LQ96KA5 538 aa12.46□□□□□ -0.41
HSPG2-207ENST00000453796 SAMD8Q96LT4 415 aa12.46□□□□□ -0.41
HSPG2-207ENST00000453796 TSSK2Q96PF2 358 aa12.46□□□□□ -0.41
HSPG2-207ENST00000453796 VNN3Q9NY84 501 aa12.46□□□□□ -0.41
HSPG2-207ENST00000453796 TAAR3PQ9P1P4 343 aa12.46□□□□□ -0.41
HSPG2-207ENST00000453796 CUBNO60494 3623 aa12.46□□□□□ -0.42
HSPG2-207ENST00000453796 IGLV1-36A0A0B4J1U3 117 aa12.45□□□□□ -0.42
HSPG2-207ENST00000453796 A0A1W2PPW3 197 aa12.45□□□□□ -0.42
HSPG2-207ENST00000453796 LYNX1G3V0Z9 82 aa12.45□□□□□ -0.42
HSPG2-207ENST00000453796 TNFRSF11BO00300 401 aa12.45□□□□□ -0.42
HSPG2-207ENST00000453796 NGFP01138 241 aa12.45□□□□□ -0.42
HSPG2-207ENST00000453796 TACSTD2P09758 323 aa12.45□□□□□ -0.42
HSPG2-207ENST00000453796 LYNX1P0DP58 116 aa12.45□□□□□ -0.42
HSPG2-207ENST00000453796 GAAP10253 952 aa12.45□□□□□ -0.42
HSPG2-207ENST00000453796 NAT2P11245 290 aa12.45□□□□□ -0.42
HSPG2-207ENST00000453796 HIST1H1CP16403 213 aaKnown RBP12.45□□□□□ -0.42
HSPG2-207ENST00000453796 ZNF23P17027 643 aa12.45□□□□□ -0.42
HSPG2-207ENST00000453796 SCRN3Q0VDG4 424 aa12.45□□□□□ -0.42
HSPG2-207ENST00000453796 AQP6Q13520 282 aa12.45□□□□□ -0.42
HSPG2-207ENST00000453796 GGTLC2Q14390 218 aa12.45□□□□□ -0.42
HSPG2-207ENST00000453796 ALKBH6Q3KRA9 238 aa12.45□□□□□ -0.42
HSPG2-207ENST00000453796 OTPQ5XKR4 325 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms