RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 EDARQ9UNE0 448 aa12.7□□□□□ -0.38
NCKIPSD-207ENST00000453349 TVP23AA6NH52 213 aa12.69□□□□□ -0.38
NCKIPSD-207ENST00000453349 CASQ2O14958 399 aaPredicted RBP12.69□□□□□ -0.38
NCKIPSD-207ENST00000453349 PRODHO43272 600 aa12.69□□□□□ -0.38
NCKIPSD-207ENST00000453349 PRKYO43930 277 aa12.69□□□□□ -0.38
NCKIPSD-207ENST00000453349 SNAP29O95721 258 aa12.69□□□□□ -0.38
NCKIPSD-207ENST00000453349 TFP02787 698 aa12.69□□□□□ -0.38
NCKIPSD-207ENST00000453349 CELA3BP08861 270 aa12.69□□□□□ -0.38
NCKIPSD-207ENST00000453349 GAAP10253 952 aa12.69□□□□□ -0.38
NCKIPSD-207ENST00000453349 APLNRP35414 380 aa12.69□□□□□ -0.38
NCKIPSD-207ENST00000453349 RPS7P62081 194 aaKnown RBP12.69□□□□□ -0.38
NCKIPSD-207ENST00000453349 ADAM8P78325 824 aa12.69□□□□□ -0.38
NCKIPSD-207ENST00000453349 DBPQ10586 325 aaPredicted RBP12.69□□□□□ -0.38
NCKIPSD-207ENST00000453349 MEP1BQ16820 701 aa12.69□□□□□ -0.38
NCKIPSD-207ENST00000453349 TBC1D28Q2M2D7 210 aa12.69□□□□□ -0.38
NCKIPSD-207ENST00000453349 SLC35D3Q5M8T2 416 aa12.69□□□□□ -0.38
NCKIPSD-207ENST00000453349 ADAM5Q6NVV9 412 aa12.69□□□□□ -0.38
NCKIPSD-207ENST00000453349 ZNF555Q8NEP9 628 aa12.69□□□□□ -0.38
NCKIPSD-207ENST00000453349 GJC3Q8NFK1 279 aa12.69□□□□□ -0.38
NCKIPSD-207ENST00000453349 AKR7LQ8NHP1 331 aa12.69□□□□□ -0.38
NCKIPSD-207ENST00000453349 TMEM163Q8TC26 289 aa12.69□□□□□ -0.38
NCKIPSD-207ENST00000453349 ZNRF4Q8WWF5 429 aa12.69□□□□□ -0.38
NCKIPSD-207ENST00000453349 AKAP1Q92667 903 aaKnown RBP eCLIP12.69□□□□□ -0.38
NCKIPSD-207ENST00000453349 MS4A3Q96HJ5 214 aa12.69□□□□□ -0.38
NCKIPSD-207ENST00000453349 HRASLS5Q96KN8 279 aa12.69□□□□□ -0.38
NCKIPSD-207ENST00000453349 HCAR1Q9BXC0 346 aa12.69□□□□□ -0.38
NCKIPSD-207ENST00000453349 OR2H1Q9GZK4 316 aa12.69□□□□□ -0.38
NCKIPSD-207ENST00000453349 VCXQ9H320 206 aa12.69□□□□□ -0.38
NCKIPSD-207ENST00000453349 RNPEPL1Q9HAU8 725 aa12.69□□□□□ -0.38
NCKIPSD-207ENST00000453349 HINT3Q9NQE9 182 aaKnown RBP12.69□□□□□ -0.38
NCKIPSD-207ENST00000453349 SMPD3Q9NY59 655 aaPredicted RBP12.69□□□□□ -0.38
NCKIPSD-207ENST00000453349 NKX1-2Q9UD57 310 aaPredicted RBP12.69□□□□□ -0.38
NCKIPSD-207ENST00000453349 KCNG2Q9UJ96 466 aa12.69□□□□□ -0.38
NCKIPSD-207ENST00000453349 SPEF1Q9Y4P9 236 aa12.69□□□□□ -0.38
NCKIPSD-207ENST00000453349 ATP23Q9Y6H3 246 aa12.69□□□□□ -0.38
NCKIPSD-207ENST00000453349 FASNP49327 2511 aaKnown RBP12.69□□□□□ -0.38
NCKIPSD-207ENST00000453349 DOPEY2Q9Y3R5 2298 aa12.69□□□□□ -0.38
NCKIPSD-207ENST00000453349 ICE1Q9Y2F5 2266 aa12.68□□□□□ -0.38
NCKIPSD-207ENST00000453349 SHISA9B4DS77 424 aa12.68□□□□□ -0.38
NCKIPSD-207ENST00000453349 ZNF593O00488 134 aaPredicted RBP12.68□□□□□ -0.38
NCKIPSD-207ENST00000453349 SGCEO43556 437 aa12.68□□□□□ -0.38
NCKIPSD-207ENST00000453349 STOMP27105 288 aa12.68□□□□□ -0.38
NCKIPSD-207ENST00000453349 PEX2P28328 305 aa12.68□□□□□ -0.38
NCKIPSD-207ENST00000453349 GSTT1P30711 240 aa12.68□□□□□ -0.38
NCKIPSD-207ENST00000453349 GGT2P36268 569 aa12.68□□□□□ -0.38
NCKIPSD-207ENST00000453349 EFNB1P98172 346 aa12.68□□□□□ -0.38
NCKIPSD-207ENST00000453349 GALK2Q01415 458 aa12.68□□□□□ -0.38
NCKIPSD-207ENST00000453349 ZNF672Q499Z4 452 aaPredicted RBP12.68□□□□□ -0.38
NCKIPSD-207ENST00000453349 OGFRL1Q5TC84 451 aaPredicted RBP12.68□□□□□ -0.38
NCKIPSD-207ENST00000453349 OTPQ5XKR4 325 aa12.68□□□□□ -0.38
NCKIPSD-207ENST00000453349 ZNF511Q8NB15 262 aa12.68□□□□□ -0.38
NCKIPSD-207ENST00000453349 SLC30A7Q8NEW0 376 aa12.68□□□□□ -0.38
NCKIPSD-207ENST00000453349 KBTBD8Q8NFY9 601 aa12.68□□□□□ -0.38
NCKIPSD-207ENST00000453349 OR4F15Q8NGB8 312 aa12.68□□□□□ -0.38
NCKIPSD-207ENST00000453349 TRUB1Q8WWH5 349 aaKnown RBP12.68□□□□□ -0.38
NCKIPSD-207ENST00000453349 IL4I1Q96RQ9 567 aa12.68□□□□□ -0.38
NCKIPSD-207ENST00000453349 MBOAT4Q96T53 435 aa12.68□□□□□ -0.38
NCKIPSD-207ENST00000453349 WNT5BQ9H1J7 359 aa12.68□□□□□ -0.38
NCKIPSD-207ENST00000453349 PLEKHF2Q9H8W4 249 aa12.68□□□□□ -0.38
NCKIPSD-207ENST00000453349 UBTD1Q9HAC8 227 aa12.68□□□□□ -0.38
NCKIPSD-207ENST00000453349 CDH20Q9HBT6 801 aa12.68□□□□□ -0.38
NCKIPSD-207ENST00000453349 FAM118AQ9NWS6 357 aa12.68□□□□□ -0.38
NCKIPSD-207ENST00000453349 MRPL22Q9NWU5 206 aaKnown RBP12.68□□□□□ -0.38
NCKIPSD-207ENST00000453349 IMPAD1Q9NX62 359 aa12.68□□□□□ -0.38
NCKIPSD-207ENST00000453349 PLEK2Q9NYT0 353 aa12.68□□□□□ -0.38
NCKIPSD-207ENST00000453349 CISD1Q9NZ45 108 aaKnown RBP12.68□□□□□ -0.38
NCKIPSD-207ENST00000453349 ASH2LQ9UBL3 628 aa12.68□□□□□ -0.38
NCKIPSD-207ENST00000453349 GMPPBQ9Y5P6 360 aa12.68□□□□□ -0.38
NCKIPSD-207ENST00000453349 COL12A1Q99715 3063 aa12.67□□□□□ -0.38
NCKIPSD-207ENST00000453349 IGHV2OR16-5A0A0B4J2B6 119 aa12.67□□□□□ -0.38
NCKIPSD-207ENST00000453349 LOC100130705A0A1B0GUX0 176 aa12.67□□□□□ -0.38
NCKIPSD-207ENST00000453349 VSTM5A8MXK1 200 aa12.67□□□□□ -0.38
NCKIPSD-207ENST00000453349 HS3ST1O14792 307 aa12.67□□□□□ -0.38
NCKIPSD-207ENST00000453349 COX5BP10606 129 aa12.67□□□□□ -0.38
NCKIPSD-207ENST00000453349 ZNF35P13682 527 aa12.67□□□□□ -0.38
NCKIPSD-207ENST00000453349 CCNOP22674 350 aa12.67□□□□□ -0.38
NCKIPSD-207ENST00000453349 APEX1P27695 318 aaKnown RBP12.67□□□□□ -0.38
NCKIPSD-207ENST00000453349 CALCRP30988 508 aa12.67□□□□□ -0.38
NCKIPSD-207ENST00000453349 ENTPD1P49961 510 aa12.67□□□□□ -0.38
NCKIPSD-207ENST00000453349 GDI2P50395 445 aaKnown RBP12.67□□□□□ -0.38
NCKIPSD-207ENST00000453349 SPOCK1Q08629 439 aa12.67□□□□□ -0.38
NCKIPSD-207ENST00000453349 APOFQ13790 326 aa12.67□□□□□ -0.38
NCKIPSD-207ENST00000453349 LCN1P1Q5VSP4 162 aa12.67□□□□□ -0.38
NCKIPSD-207ENST00000453349 NXNL2Q5VZ03 156 aa12.67□□□□□ -0.38
NCKIPSD-207ENST00000453349 ZNF774Q6NX45 483 aa12.67□□□□□ -0.38
NCKIPSD-207ENST00000453349 MYPOPQ86VE0 399 aaPredicted RBP12.67□□□□□ -0.38
NCKIPSD-207ENST00000453349 ZNF584Q8IVC4 421 aa12.67□□□□□ -0.38
NCKIPSD-207ENST00000453349 CPEB3Q8NE35 698 aaKnown RBP12.67□□□□□ -0.38
NCKIPSD-207ENST00000453349 OR8J1Q8NGP2 316 aa12.67□□□□□ -0.38
NCKIPSD-207ENST00000453349 LILRB1Q8NHL6 650 aaPredicted RBP12.67□□□□□ -0.38
NCKIPSD-207ENST00000453349 FAM81AQ8TBF8 368 aa12.67□□□□□ -0.38
NCKIPSD-207ENST00000453349 FBXW5Q969U6 566 aa12.67□□□□□ -0.38
NCKIPSD-207ENST00000453349 INTS14Q96SY0 518 aa12.67□□□□□ -0.38
NCKIPSD-207ENST00000453349 TEAD3Q99594 435 aa12.67□□□□□ -0.38
NCKIPSD-207ENST00000453349 WDR76Q9H967 626 aa12.67□□□□□ -0.38
NCKIPSD-207ENST00000453349 EIF3KQ9UBQ5 218 aaKnown RBP12.67□□□□□ -0.38
NCKIPSD-207ENST00000453349 NDRG4Q9ULP0 352 aaKnown RBP12.67□□□□□ -0.38
NCKIPSD-207ENST00000453349 A0A1W2PPR1 153 aa12.66□□□□□ -0.38
NCKIPSD-207ENST00000453349 ATP6V1G2-DDX39BF2Z307 99 aa12.66□□□□□ -0.38
NCKIPSD-207ENST00000453349 RER1O15258 196 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms