RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 RHCEP18577 417 aa11.01□□□□□ -0.65
CHD3-206ENST00000452447 LCN6P62502 163 aa11.01□□□□□ -0.65
CHD3-206ENST00000452447 TEKQ02763 1124 aa11.01□□□□□ -0.65
CHD3-206ENST00000452447 GLO1Q04760 184 aa11.01□□□□□ -0.65
CHD3-206ENST00000452447 FHL1Q13642 323 aa11.01□□□□□ -0.65
CHD3-206ENST00000452447 FGD3Q5JSP0 725 aa11.01□□□□□ -0.65
CHD3-206ENST00000452447 SPATA46Q5T0L3 261 aa11.01□□□□□ -0.65
CHD3-206ENST00000452447 ARL9Q6T311 187 aa11.01□□□□□ -0.65
CHD3-206ENST00000452447 PHC2Q8IXK0 858 aa11.01□□□□□ -0.65
CHD3-206ENST00000452447 CLDND2Q8NHS1 167 aa11.01□□□□□ -0.65
CHD3-206ENST00000452447 SLC7A13Q8TCU3 470 aa11.01□□□□□ -0.65
CHD3-206ENST00000452447 FAM46AQ96IP4 442 aaKnown RBP11.01□□□□□ -0.65
CHD3-206ENST00000452447 ZNF570Q96NI8 536 aa11.01□□□□□ -0.65
CHD3-206ENST00000452447 MYLK2Q9H1R3 596 aa11.01□□□□□ -0.65
CHD3-206ENST00000452447 KRCC1Q9NPI7 259 aaPredicted RBP11.01□□□□□ -0.65
CHD3-206ENST00000452447 NKIRAS2Q9NYR9 191 aa11.01□□□□□ -0.65
CHD3-206ENST00000452447 SAMD4AQ9UPU9 718 aaKnown RBP11.01□□□□□ -0.65
CHD3-206ENST00000452447 A0A1W2PRQ8 180 aa11□□□□□ -0.65
CHD3-206ENST00000452447 AHCYL1O43865 530 aa11□□□□□ -0.65
CHD3-206ENST00000452447 PRDX6P30041 224 aa11□□□□□ -0.65
CHD3-206ENST00000452447 SRP14P37108 136 aaKnown RBP11□□□□□ -0.65
CHD3-206ENST00000452447 WNT5AP41221 380 aa11□□□□□ -0.65
CHD3-206ENST00000452447 ZNF81P51508 661 aa11□□□□□ -0.65
CHD3-206ENST00000452447 GABPB1Q06547 395 aaPredicted RBP11□□□□□ -0.65
CHD3-206ENST00000452447 DGCR6Q14129 220 aa11□□□□□ -0.65
CHD3-206ENST00000452447 KRT72Q14CN4 511 aa11□□□□□ -0.65
CHD3-206ENST00000452447 ZNF774Q6NX45 483 aa11□□□□□ -0.65
CHD3-206ENST00000452447 SYT9Q86SS6 491 aa11□□□□□ -0.65
CHD3-206ENST00000452447 FAM156AQ8NDB6 213 aa11□□□□□ -0.65
CHD3-206ENST00000452447 ABHD4Q8TB40 342 aa11□□□□□ -0.65
CHD3-206ENST00000452447 SLC25A40Q8TBP6 338 aa11□□□□□ -0.65
CHD3-206ENST00000452447 MARS2Q96GW9 593 aaKnown RBP11□□□□□ -0.65
CHD3-206ENST00000452447 C1orf159Q96HA4 380 aa11□□□□□ -0.65
CHD3-206ENST00000452447 Q96M85 177 aa11□□□□□ -0.65
CHD3-206ENST00000452447 REPIN1Q9BWE0 567 aaKnown RBP11□□□□□ -0.65
CHD3-206ENST00000452447 OR2J1Q9GZK6 312 aa11□□□□□ -0.65
CHD3-206ENST00000452447 WNT5BQ9H1J7 359 aa11□□□□□ -0.65
CHD3-206ENST00000452447 SAP30LQ9HAJ7 183 aa11□□□□□ -0.65
CHD3-206ENST00000452447 ELOVL3Q9HB03 270 aa11□□□□□ -0.65
CHD3-206ENST00000452447 NDRG4Q9ULP0 352 aaKnown RBP11□□□□□ -0.65
CHD3-206ENST00000452447 AURKCQ9UQB9 309 aa11□□□□□ -0.65
CHD3-206ENST00000452447 PRSS37A4D1T9 235 aa10.99□□□□□ -0.65
CHD3-206ENST00000452447 RP2O75695 350 aa10.99□□□□□ -0.65
CHD3-206ENST00000452447 NDUFB2O95178 105 aa10.99□□□□□ -0.65
CHD3-206ENST00000452447 FAM107AO95990 144 aa10.99□□□□□ -0.65
CHD3-206ENST00000452447 TFP02787 698 aa10.99□□□□□ -0.65
CHD3-206ENST00000452447 CRYBB2P43320 205 aa10.99□□□□□ -0.65
CHD3-206ENST00000452447 ARHGDIAP52565 204 aa10.99□□□□□ -0.65
CHD3-206ENST00000452447 DVL1P1P54792 670 aaPredicted RBP10.99□□□□□ -0.65
CHD3-206ENST00000452447 PPP1CBP62140 327 aa10.99□□□□□ -0.65
CHD3-206ENST00000452447 ENDOGQ14249 297 aaKnown RBP10.99□□□□□ -0.65
CHD3-206ENST00000452447 TSTQ16762 297 aaKnown RBP10.99□□□□□ -0.65
CHD3-206ENST00000452447 HFEQ30201 348 aa10.99□□□□□ -0.65
CHD3-206ENST00000452447 FOXL2NBQ6ZUU3 175 aa10.99□□□□□ -0.65
CHD3-206ENST00000452447 USP51Q70EK9 711 aa10.99□□□□□ -0.65
CHD3-206ENST00000452447 GLCCI1Q86VQ1 547 aa10.99□□□□□ -0.65
CHD3-206ENST00000452447 RNF148Q8N7C7 305 aa10.99□□□□□ -0.65
CHD3-206ENST00000452447 KLF14Q8TD94 323 aaPredicted RBP10.99□□□□□ -0.65
CHD3-206ENST00000452447 C4orf45Q96LM5 186 aa10.99□□□□□ -0.65
CHD3-206ENST00000452447 WACQ9BTA9 647 aa10.99□□□□□ -0.65
CHD3-206ENST00000452447 RACGAP1Q9H0H5 632 aa10.99□□□□□ -0.65
CHD3-206ENST00000452447 RERGLQ9H628 205 aa10.99□□□□□ -0.65
CHD3-206ENST00000452447 POLE4Q9NR33 117 aa10.99□□□□□ -0.65
CHD3-206ENST00000452447 DCAF13Q9NV06 445 aaKnown RBP10.99□□□□□ -0.65
CHD3-206ENST00000452447 TREM2Q9NZC2 230 aa10.99□□□□□ -0.65
CHD3-206ENST00000452447 NDUFAF4Q9P032 175 aa10.99□□□□□ -0.65
CHD3-206ENST00000452447 IGHV1-69-2A0A0G2JMI3 117 aa10.99□□□□□ -0.65
CHD3-206ENST00000452447 WNT9BO14905 357 aa10.99□□□□□ -0.65
CHD3-206ENST00000452447 SPRY3O43610 288 aa10.99□□□□□ -0.65
CHD3-206ENST00000452447 SNX3O60493 162 aa10.99□□□□□ -0.65
CHD3-206ENST00000452447 ITGA2P17301 1181 aa10.99□□□□□ -0.65
CHD3-206ENST00000452447 LIPAP38571 399 aa10.99□□□□□ -0.65
CHD3-206ENST00000452447 MPV17P39210 176 aa10.99□□□□□ -0.65
CHD3-206ENST00000452447 SCRN3Q0VDG4 424 aa10.99□□□□□ -0.65
CHD3-206ENST00000452447 MESTQ5EB52 335 aa10.99□□□□□ -0.65
CHD3-206ENST00000452447 FAM209AQ5JX71 171 aa10.99□□□□□ -0.65
CHD3-206ENST00000452447 MBNL2Q5VZF2 373 aaKnown RBP10.99□□□□□ -0.65
CHD3-206ENST00000452447 GPR139Q6DWJ6 353 aa10.99□□□□□ -0.65
CHD3-206ENST00000452447 RFPL4BQ6ZWI9 263 aa10.99□□□□□ -0.65
CHD3-206ENST00000452447 FAM122BQ7Z309 247 aa10.99□□□□□ -0.65
CHD3-206ENST00000452447 TSEN54Q7Z6J9 526 aaKnown RBP10.99□□□□□ -0.65
CHD3-206ENST00000452447 OR52J3Q8NH60 311 aa10.99□□□□□ -0.65
CHD3-206ENST00000452447 IPCEF1Q8WWN9 437 aaPredicted RBP10.99□□□□□ -0.65
CHD3-206ENST00000452447 LPAR2Q9HBW0 351 aa10.99□□□□□ -0.65
CHD3-206ENST00000452447 EMC7Q9NPA0 242 aa10.99□□□□□ -0.65
CHD3-206ENST00000452447 CYSLTR2Q9NS75 346 aa10.99□□□□□ -0.65
CHD3-206ENST00000452447 SIGLEC7Q9Y286 467 aa10.99□□□□□ -0.65
CHD3-206ENST00000452447 TEX13CA0A0J9YWL9 993 aa10.98□□□□□ -0.65
CHD3-206ENST00000452447 CLDN25C9JDP6 229 aa10.98□□□□□ -0.65
CHD3-206ENST00000452447 H3BSA7 217 aa10.98□□□□□ -0.65
CHD3-206ENST00000452447 SGCEO43556 437 aa10.98□□□□□ -0.65
CHD3-206ENST00000452447 ICMTO60725 284 aa10.98□□□□□ -0.65
CHD3-206ENST00000452447 PTP4A3O75365 173 aa10.98□□□□□ -0.65
CHD3-206ENST00000452447 DIRAS1O95057 198 aa10.98□□□□□ -0.65
CHD3-206ENST00000452447 ABHD16AO95870 558 aa10.98□□□□□ -0.65
CHD3-206ENST00000452447 NGFP01138 241 aa10.98□□□□□ -0.65
CHD3-206ENST00000452447 MSMBP08118 114 aa10.98□□□□□ -0.65
CHD3-206ENST00000452447 GAAP10253 952 aa10.98□□□□□ -0.65
CHD3-206ENST00000452447 ANPEPP15144 967 aa10.98□□□□□ -0.65
CHD3-206ENST00000452447 ZNF26P17031 533 aaPredicted RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms