RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 ZER1Q7Z7L7 766 aa9.22□□□□□ -0.93
USP1-204ENST00000452143 NKAIN4Q8IVV8 208 aa9.22□□□□□ -0.93
USP1-204ENST00000452143 ZDHHC22Q8N966 263 aa9.22□□□□□ -0.93
USP1-204ENST00000452143 ABHD4Q8TB40 342 aa9.22□□□□□ -0.93
USP1-204ENST00000452143 HDAC2Q92769 488 aaKnown RBP9.22□□□□□ -0.93
USP1-204ENST00000452143 POP5Q969H6 163 aaKnown RBP9.22□□□□□ -0.93
USP1-204ENST00000452143 ATP6V1G3Q96LB4 118 aa9.22□□□□□ -0.93
USP1-204ENST00000452143 WACQ9BTA9 647 aa9.22□□□□□ -0.93
USP1-204ENST00000452143 KRTAP4-6Q9BYQ5 205 aa9.22□□□□□ -0.93
USP1-204ENST00000452143 OR2H1Q9GZK4 316 aa9.22□□□□□ -0.93
USP1-204ENST00000452143 OR2J1Q9GZK6 312 aa9.22□□□□□ -0.93
USP1-204ENST00000452143 ELOVL3Q9HB03 270 aa9.22□□□□□ -0.93
USP1-204ENST00000452143 ESM1Q9NQ30 184 aa9.22□□□□□ -0.93
USP1-204ENST00000452143 MRGBPQ9NV56 204 aa9.22□□□□□ -0.93
USP1-204ENST00000452143 OPN4Q9UHM6 478 aa9.22□□□□□ -0.93
USP1-204ENST00000452143 RIMS3Q9UJD0 308 aa9.22□□□□□ -0.93
USP1-204ENST00000452143 NDRG4Q9ULP0 352 aaKnown RBP9.22□□□□□ -0.93
USP1-204ENST00000452143 TGP01266 2768 aa9.22□□□□□ -0.93
USP1-204ENST00000452143 IGKV1D-43A0A0B4J1Z2 117 aa9.21□□□□□ -0.94
USP1-204ENST00000452143 IFNA14P01570 189 aa9.21□□□□□ -0.94
USP1-204ENST00000452143 TUBG1P23258 451 aa9.21□□□□□ -0.94
USP1-204ENST00000452143 GUCA1AP43080 201 aaPredicted RBP9.21□□□□□ -0.94
USP1-204ENST00000452143 RPL27P61353 136 aaKnown RBP9.21□□□□□ -0.94
USP1-204ENST00000452143 PPP1CBP62140 327 aa9.21□□□□□ -0.94
USP1-204ENST00000452143 LCN2P80188 198 aa9.21□□□□□ -0.94
USP1-204ENST00000452143 FOXL1Q12952 345 aa9.21□□□□□ -0.94
USP1-204ENST00000452143 CYLC2Q14093 348 aaPredicted RBP9.21□□□□□ -0.94
USP1-204ENST00000452143 SGCAQ16586 387 aa9.21□□□□□ -0.94
USP1-204ENST00000452143 TUSC1Q2TAM9 212 aa9.21□□□□□ -0.94
USP1-204ENST00000452143 ARMCX4Q5H9R4 360 aa9.21□□□□□ -0.94
USP1-204ENST00000452143 MTX3Q5HYI7 312 aa9.21□□□□□ -0.94
USP1-204ENST00000452143 COQ5Q5HYK3 327 aa9.21□□□□□ -0.94
USP1-204ENST00000452143 PRR31Q5SQ13 230 aa9.21□□□□□ -0.94
USP1-204ENST00000452143 METTL21CQ5VZV1 264 aa9.21□□□□□ -0.94
USP1-204ENST00000452143 ERICH5Q6P6B1 374 aa9.21□□□□□ -0.94
USP1-204ENST00000452143 SLC25A47Q6Q0C1 308 aa9.21□□□□□ -0.94
USP1-204ENST00000452143 RBMS3Q6XE24 437 aaKnown RBP9.21□□□□□ -0.94
USP1-204ENST00000452143 FOXL2NBQ6ZUU3 175 aa9.21□□□□□ -0.94
USP1-204ENST00000452143 SYT9Q86SS6 491 aa9.21□□□□□ -0.94
USP1-204ENST00000452143 SPICQ8N5J4 248 aa9.21□□□□□ -0.94
USP1-204ENST00000452143 NPEPL1Q8NDH3 523 aa9.21□□□□□ -0.94
USP1-204ENST00000452143 OR8J3Q8NGG0 315 aa9.21□□□□□ -0.94
USP1-204ENST00000452143 AKR7LQ8NHP1 331 aa9.21□□□□□ -0.94
USP1-204ENST00000452143 MOSPD2Q8NHP6 518 aa9.21□□□□□ -0.94
USP1-204ENST00000452143 GEMIN6Q8WXD5 167 aaKnown RBP9.21□□□□□ -0.94
USP1-204ENST00000452143 NSMAFQ92636 917 aa9.21□□□□□ -0.94
USP1-204ENST00000452143 DVL3Q92997 716 aaPredicted RBP9.21□□□□□ -0.94
USP1-204ENST00000452143 RBP7Q96R05 134 aa9.21□□□□□ -0.94
USP1-204ENST00000452143 WNT5BQ9H1J7 359 aa9.21□□□□□ -0.94
USP1-204ENST00000452143 TUBG2Q9NRH3 451 aa9.21□□□□□ -0.94
USP1-204ENST00000452143 UBAP1Q9NZ09 502 aa9.21□□□□□ -0.94
USP1-204ENST00000452143 KLHL21Q9UJP4 597 aa9.21□□□□□ -0.94
USP1-204ENST00000452143 PURGQ9UJV8 347 aaKnown RBP9.21□□□□□ -0.94
USP1-204ENST00000452143 POLR3KQ9Y2Y1 108 aaPredicted RBP9.21□□□□□ -0.94
USP1-204ENST00000452143 TIMM10BQ9Y5J6 103 aa9.21□□□□□ -0.94
USP1-204ENST00000452143 NPTNQ9Y639 398 aa9.21□□□□□ -0.94
USP1-204ENST00000452143 C12orf71A8MTZ7 269 aa9.2□□□□□ -0.94
USP1-204ENST00000452143 A8MXK9 166 aa9.2□□□□□ -0.94
USP1-204ENST00000452143 TIMM8AO60220 97 aaPredicted RBP9.2□□□□□ -0.94
USP1-204ENST00000452143 NPPAP01160 153 aa9.2□□□□□ -0.94
USP1-204ENST00000452143 IGHV2-70P01814 119 aa9.2□□□□□ -0.94
USP1-204ENST00000452143 HKR1P10072 659 aa9.2□□□□□ -0.94
USP1-204ENST00000452143 COX5BP10606 129 aa9.2□□□□□ -0.94
USP1-204ENST00000452143 TNFRSF1AP19438 455 aa9.2□□□□□ -0.94
USP1-204ENST00000452143 GSTM3P21266 225 aa9.2□□□□□ -0.94
USP1-204ENST00000452143 MSR1P21757 451 aa9.2□□□□□ -0.94
USP1-204ENST00000452143 TNFSF4P23510 183 aa9.2□□□□□ -0.94
USP1-204ENST00000452143 LAP3P28838 519 aa9.2□□□□□ -0.94
USP1-204ENST00000452143 IFNA8P32881 189 aa9.2□□□□□ -0.94
USP1-204ENST00000452143 TNFAIP6P98066 277 aaPredicted RBP9.2□□□□□ -0.94
USP1-204ENST00000452143 ST3GAL3Q11203 375 aa9.2□□□□□ -0.94
USP1-204ENST00000452143 TOP3AQ13472 1001 aaPredicted RBP9.2□□□□□ -0.94
USP1-204ENST00000452143 PIN1Q13526 163 aaPredicted RBP9.2□□□□□ -0.94
USP1-204ENST00000452143 ANKDD1AQ495B1 522 aa9.2□□□□□ -0.94
USP1-204ENST00000452143 TMEM155Q4W5P6 130 aa9.2□□□□□ -0.94
USP1-204ENST00000452143 NANOGP8Q6NSW7 305 aa9.2□□□□□ -0.94
USP1-204ENST00000452143 SHISA2Q6UWI4 295 aa9.2□□□□□ -0.94
USP1-204ENST00000452143 LIAT1Q6ZQX7 453 aa9.2□□□□□ -0.94
USP1-204ENST00000452143 DOK3Q7L591 496 aa9.2□□□□□ -0.94
USP1-204ENST00000452143 CALHM3Q86XJ0 350 aa9.2□□□□□ -0.94
USP1-204ENST00000452143 KLHL36Q8N4N3 616 aa9.2□□□□□ -0.94
USP1-204ENST00000452143 DEFB108BQ8NET1 73 aa9.2□□□□□ -0.94
USP1-204ENST00000452143 BPIFA2Q96DR5 249 aa9.2□□□□□ -0.94
USP1-204ENST00000452143 C4orf45Q96LM5 186 aa9.2□□□□□ -0.94
USP1-204ENST00000452143 PRRC1Q96M27 445 aa9.2□□□□□ -0.94
USP1-204ENST00000452143 MAGEB18Q96M61 343 aa9.2□□□□□ -0.94
USP1-204ENST00000452143 GPA33Q99795 319 aa9.2□□□□□ -0.94
USP1-204ENST00000452143 ECSITQ9BQ95 431 aa9.2□□□□□ -0.94
USP1-204ENST00000452143 ZNF747Q9BV97 191 aa9.2□□□□□ -0.94
USP1-204ENST00000452143 MSL2Q9HCI7 577 aa9.2□□□□□ -0.94
USP1-204ENST00000452143 TMEM106BQ9NUM4 274 aa9.2□□□□□ -0.94
USP1-204ENST00000452143 INTS9Q9NV88 658 aaKnown RBP9.2□□□□□ -0.94
USP1-204ENST00000452143 TBCCD1Q9NVR7 557 aa9.2□□□□□ -0.94
USP1-204ENST00000452143 A6NIZ1 184 aa9.19□□□□□ -0.94
USP1-204ENST00000452143 FXYD1O00168 92 aa9.19□□□□□ -0.94
USP1-204ENST00000452143 SURF4O15260 269 aa9.19□□□□□ -0.94
USP1-204ENST00000452143 ABHD16AO95870 558 aa9.19□□□□□ -0.94
USP1-204ENST00000452143 NGFP01138 241 aa9.19□□□□□ -0.94
USP1-204ENST00000452143 TNFRSF1BP20333 461 aa9.19□□□□□ -0.94
USP1-204ENST00000452143 PRTN3P24158 256 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms