RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 SMAP2Q8WU79 429 aaPredicted RBP16.94■□□□□ 0.3
RPS28-202ENST00000449223 MRPL48Q96GC5 212 aaKnown RBP16.94■□□□□ 0.3
RPS28-202ENST00000449223 ZNF629Q9UEG4 869 aaPredicted RBP16.94■□□□□ 0.3
RPS28-202ENST00000449223 LAMP5Q9UJQ1 280 aa16.94■□□□□ 0.3
RPS28-202ENST00000449223 LHFPL6Q9Y693 200 aa16.94■□□□□ 0.3
RPS28-202ENST00000449223 HSPB2A8KAH6 182 aa16.93■□□□□ 0.3
RPS28-202ENST00000449223 CST2P09228 141 aa16.93■□□□□ 0.3
RPS28-202ENST00000449223 COX5AP20674 150 aa16.93■□□□□ 0.3
RPS28-202ENST00000449223 HCCSP53701 268 aa16.93■□□□□ 0.3
RPS28-202ENST00000449223 CASP6P55212 293 aa16.93■□□□□ 0.3
RPS28-202ENST00000449223 ROM1Q03395 351 aa16.93■□□□□ 0.3
RPS28-202ENST00000449223 ACSM1Q08AH1 577 aa16.93■□□□□ 0.3
RPS28-202ENST00000449223 FAPQ12884 760 aa16.93■□□□□ 0.3
RPS28-202ENST00000449223 ENDOGQ14249 297 aaKnown RBP16.93■□□□□ 0.3
RPS28-202ENST00000449223 HSPB2Q16082 182 aa16.93■□□□□ 0.3
RPS28-202ENST00000449223 TMEM211Q6ICI0 200 aa16.93■□□□□ 0.3
RPS28-202ENST00000449223 SLC18B1Q6NT16 456 aa16.93■□□□□ 0.3
RPS28-202ENST00000449223 ZNF322Q6U7Q0 402 aaPredicted RBP16.93■□□□□ 0.3
RPS28-202ENST00000449223 ATCAYQ86WG3 371 aa16.93■□□□□ 0.3
RPS28-202ENST00000449223 UBE2J2Q8N2K1 259 aa16.93■□□□□ 0.3
RPS28-202ENST00000449223 SLC22A24Q8N4F4 322 aa16.93■□□□□ 0.3
RPS28-202ENST00000449223 RORBQ92753 470 aa16.93■□□□□ 0.3
RPS28-202ENST00000449223 TBX5Q99593 518 aa16.93■□□□□ 0.3
RPS28-202ENST00000449223 ZNF416Q9BWM5 594 aa16.93■□□□□ 0.3
RPS28-202ENST00000449223 KLHDC2Q9Y2U9 406 aa16.93■□□□□ 0.3
RPS28-202ENST00000449223 KMT2BQ9UMN6 2715 aaPredicted RBP16.92■□□□□ 0.3
RPS28-202ENST00000449223 SULT1C4O75897 302 aa16.92■□□□□ 0.3
RPS28-202ENST00000449223 ITGA5P08648 1049 aa16.92■□□□□ 0.3
RPS28-202ENST00000449223 SPARCP09486 303 aa16.92■□□□□ 0.3
RPS28-202ENST00000449223 OPRM1P35372 400 aa16.92■□□□□ 0.3
RPS28-202ENST00000449223 RPS27P42677 84 aaKnown RBP16.92■□□□□ 0.3
RPS28-202ENST00000449223 HIST1H3AP68431 136 aa16.92■□□□□ 0.3
RPS28-202ENST00000449223 PMPCAQ10713 525 aa16.92■□□□□ 0.3
RPS28-202ENST00000449223 AQP6Q13520 282 aa16.92■□□□□ 0.3
RPS28-202ENST00000449223 SPHARQ15513 63 aa16.92■□□□□ 0.3
RPS28-202ENST00000449223 HIST2H3PS2Q5TEC6 136 aa16.92■□□□□ 0.3
RPS28-202ENST00000449223 TMPRSS11AQ6ZMR5 421 aa16.92■□□□□ 0.3
RPS28-202ENST00000449223 HIST2H3AQ71DI3 136 aa16.92■□□□□ 0.3
RPS28-202ENST00000449223 KCTD20Q7Z5Y7 419 aa16.92■□□□□ 0.3
RPS28-202ENST00000449223 SYT9Q86SS6 491 aa16.92■□□□□ 0.3
RPS28-202ENST00000449223 GABRG1Q8N1C3 465 aa16.92■□□□□ 0.3
RPS28-202ENST00000449223 OR5M11Q96RB7 305 aa16.92■□□□□ 0.3
RPS28-202ENST00000449223 ABHD6Q9BV23 337 aa16.92■□□□□ 0.3
RPS28-202ENST00000449223 EMC7Q9NPA0 242 aa16.92■□□□□ 0.3
RPS28-202ENST00000449223 ISYNA1Q9NPH2 558 aa16.92■□□□□ 0.3
RPS28-202ENST00000449223 PROCRQ9UNN8 238 aa16.92■□□□□ 0.3
RPS28-202ENST00000449223 MEMO1Q9Y316 297 aa16.92■□□□□ 0.3
RPS28-202ENST00000449223 ZFYVE26Q68DK2 2539 aa16.92■□□□□ 0.3
RPS28-202ENST00000449223 PRR32B1ATL7 298 aa16.91■□□□□ 0.3
RPS28-202ENST00000449223 LCKP06239 509 aa16.91■□□□□ 0.3
RPS28-202ENST00000449223 OR8G3PP0DMU2 310 aa16.91■□□□□ 0.3
RPS28-202ENST00000449223 FOXG1P55316 489 aaPredicted RBP16.91■□□□□ 0.3
RPS28-202ENST00000449223 BDH1Q02338 343 aa16.91■□□□□ 0.3
RPS28-202ENST00000449223 NEDD8Q15843 81 aa16.91■□□□□ 0.3
RPS28-202ENST00000449223 SGCAQ16586 387 aa16.91■□□□□ 0.3
RPS28-202ENST00000449223 KCTD18Q6PI47 426 aaPredicted RBP16.91■□□□□ 0.3
RPS28-202ENST00000449223 OR52N5Q8NH56 324 aa16.91■□□□□ 0.3
RPS28-202ENST00000449223 RNF133Q8WVZ7 376 aa16.91■□□□□ 0.3
RPS28-202ENST00000449223 COG8Q96MW5 612 aa16.91■□□□□ 0.3
RPS28-202ENST00000449223 CDADC1Q9BWV3 514 aa16.91■□□□□ 0.3
RPS28-202ENST00000449223 ASH2LQ9UBL3 628 aa16.91■□□□□ 0.3
RPS28-202ENST00000449223 A0A0G2JNJ9 132 aa16.91■□□□□ 0.3
RPS28-202ENST00000449223 ABHD16AO95870 558 aa16.91■□□□□ 0.3
RPS28-202ENST00000449223 B4GALT1P15291 398 aa16.91■□□□□ 0.3
RPS28-202ENST00000449223 ARF1P84077 181 aaKnown RBP16.91■□□□□ 0.3
RPS28-202ENST00000449223 DOC2BQ14184 412 aa16.91■□□□□ 0.3
RPS28-202ENST00000449223 EIF2B1Q14232 305 aaKnown RBP16.91■□□□□ 0.3
RPS28-202ENST00000449223 OR2G6Q5TZ20 316 aa16.91■□□□□ 0.3
RPS28-202ENST00000449223 OTPQ5XKR4 325 aa16.91■□□□□ 0.3
RPS28-202ENST00000449223 DEGS2Q6QHC5 323 aa16.91■□□□□ 0.3
RPS28-202ENST00000449223 ZNF813Q6ZN06 617 aa16.91■□□□□ 0.3
RPS28-202ENST00000449223 PLEKHG7Q6ZR37 379 aa16.91■□□□□ 0.3
RPS28-202ENST00000449223 DCXRQ7Z4W1 244 aa16.91■□□□□ 0.3
RPS28-202ENST00000449223 HAVCR2Q8TDQ0 301 aa16.91■□□□□ 0.3
RPS28-202ENST00000449223 OR8B4Q96RC9 309 aa16.91■□□□□ 0.3
RPS28-202ENST00000449223 AMELYQ99218 206 aa16.91■□□□□ 0.3
RPS28-202ENST00000449223 PIGMQ9H3S5 423 aa16.91■□□□□ 0.3
RPS28-202ENST00000449223 C1orf198Q9H425 327 aa16.91■□□□□ 0.3
RPS28-202ENST00000449223 Q9UFV3 132 aa16.91■□□□□ 0.3
RPS28-202ENST00000449223 GDF2Q9UK05 429 aaPredicted RBP16.91■□□□□ 0.3
RPS28-202ENST00000449223 CACNA1CQ13936 2221 aa16.9■□□□□ 0.3
RPS28-202ENST00000449223 INMTO95050 263 aa16.9■□□□□ 0.3
RPS28-202ENST00000449223 FARS2O95363 451 aaKnown RBP16.9■□□□□ 0.3
RPS28-202ENST00000449223 MT-ND5P03915 603 aa16.9■□□□□ 0.3
RPS28-202ENST00000449223 CD79BP40259 229 aa16.9■□□□□ 0.3
RPS28-202ENST00000449223 GP2P55259 537 aaKnown RBP16.9■□□□□ 0.3
RPS28-202ENST00000449223 TGFBR3Q03167 851 aa16.9■□□□□ 0.3
RPS28-202ENST00000449223 P2RY6Q15077 328 aa16.9■□□□□ 0.3
RPS28-202ENST00000449223 ANKRD16Q6P6B7 361 aa16.9■□□□□ 0.3
RPS28-202ENST00000449223 BEND4Q6ZU67 534 aa16.9■□□□□ 0.3
RPS28-202ENST00000449223 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.9■□□□□ 0.3
RPS28-202ENST00000449223 ZNF679Q8IYX0 411 aa16.9■□□□□ 0.3
RPS28-202ENST00000449223 C1orf162Q8NEQ5 155 aaPredicted RBP16.9■□□□□ 0.3
RPS28-202ENST00000449223 OR1K1Q8NGR3 316 aa16.9■□□□□ 0.3
RPS28-202ENST00000449223 THEM6Q8WUY1 208 aa16.9■□□□□ 0.3
RPS28-202ENST00000449223 SNX33Q8WV41 574 aa16.9■□□□□ 0.3
RPS28-202ENST00000449223 HTRA1Q92743 480 aa16.9■□□□□ 0.3
RPS28-202ENST00000449223 MAP6Q96JE9 813 aa16.9■□□□□ 0.3
RPS28-202ENST00000449223 C4orf36Q96KX1 117 aa16.9■□□□□ 0.3
RPS28-202ENST00000449223 POLR1DQ9Y2S0 133 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms