RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 SCOCQ9UIL1 159 aa17.15■□□□□ 0.34
SGCE-207ENST00000447873 COPS3Q9UNS2 423 aa17.15■□□□□ 0.34
SGCE-207ENST00000447873 PCNX1Q96RV3 2341 aa17.15■□□□□ 0.34
SGCE-207ENST00000447873 MYL12BO14950 172 aa17.15■□□□□ 0.34
SGCE-207ENST00000447873 LIMS3P0CW19 117 aa17.15■□□□□ 0.34
SGCE-207ENST00000447873 LIMS4P0CW20 117 aa17.15■□□□□ 0.34
SGCE-207ENST00000447873 SMIM18P0DKX4 95 aa17.15■□□□□ 0.34
SGCE-207ENST00000447873 PSKH1P11801 424 aa17.15■□□□□ 0.34
SGCE-207ENST00000447873 GNLYP22749 145 aa17.15■□□□□ 0.34
SGCE-207ENST00000447873 IGHV1-2P23083 117 aa17.15■□□□□ 0.34
SGCE-207ENST00000447873 SLC18B1Q6NT16 456 aa17.15■□□□□ 0.34
SGCE-207ENST00000447873 KLHL24Q6TFL4 600 aa17.15■□□□□ 0.34
SGCE-207ENST00000447873 FJX1Q86VR8 437 aa17.15■□□□□ 0.34
SGCE-207ENST00000447873 LINC00346Q8IVM7 164 aa17.15■□□□□ 0.34
SGCE-207ENST00000447873 GABRG1Q8N1C3 465 aa17.15■□□□□ 0.34
SGCE-207ENST00000447873 OR2AJ1Q8NGZ0 328 aa17.15■□□□□ 0.34
SGCE-207ENST00000447873 THEM6Q8WUY1 208 aa17.15■□□□□ 0.34
SGCE-207ENST00000447873 SH3GL3Q99963 347 aa17.15■□□□□ 0.34
SGCE-207ENST00000447873 ALG8Q9BVK2 526 aa17.15■□□□□ 0.34
SGCE-207ENST00000447873 MRPS26Q9BYN8 205 aaKnown RBP17.15■□□□□ 0.34
SGCE-207ENST00000447873 ASH2LQ9UBL3 628 aa17.15■□□□□ 0.34
SGCE-207ENST00000447873 NCOA6Q14686 2063 aaPredicted RBP17.14■□□□□ 0.33
SGCE-207ENST00000447873 CACNA1CQ13936 2221 aa17.14■□□□□ 0.33
SGCE-207ENST00000447873 A0A096LPE4 126 aa17.14■□□□□ 0.33
SGCE-207ENST00000447873 A0A1B0GUH1 482 aa17.14■□□□□ 0.33
SGCE-207ENST00000447873 A0A1W2PPZ6 126 aa17.14■□□□□ 0.33
SGCE-207ENST00000447873 EEF1E1-BLOC1S5C9J1V9 151 aa17.14■□□□□ 0.33
SGCE-207ENST00000447873 MSTNO14793 375 aa17.14■□□□□ 0.33
SGCE-207ENST00000447873 PHYHO14832 338 aa17.14■□□□□ 0.33
SGCE-207ENST00000447873 EEF1E1O43324 174 aaKnown RBP17.14■□□□□ 0.33
SGCE-207ENST00000447873 ALOX5APP20292 161 aa17.14■□□□□ 0.33
SGCE-207ENST00000447873 MAP2K4P45985 399 aa17.14■□□□□ 0.33
SGCE-207ENST00000447873 TUBA4AP68366 448 aa17.14■□□□□ 0.33
SGCE-207ENST00000447873 ZNF85Q03923 595 aa17.14■□□□□ 0.33
SGCE-207ENST00000447873 EMX1Q04741 257 aaPredicted RBP17.14■□□□□ 0.33
SGCE-207ENST00000447873 EIF2B1Q14232 305 aaKnown RBP17.14■□□□□ 0.33
SGCE-207ENST00000447873 GALEQ14376 348 aa17.14■□□□□ 0.33
SGCE-207ENST00000447873 IRF3Q14653 427 aa17.14■□□□□ 0.33
SGCE-207ENST00000447873 P2RY6Q15077 328 aa17.14■□□□□ 0.33
SGCE-207ENST00000447873 TMEM154Q6P9G4 183 aa17.14■□□□□ 0.33
SGCE-207ENST00000447873 CORO6Q6QEF8 472 aa17.14■□□□□ 0.33
SGCE-207ENST00000447873 KCTD8Q6ZWB6 473 aa17.14■□□□□ 0.33
SGCE-207ENST00000447873 ZNF627Q7L945 461 aa17.14■□□□□ 0.33
SGCE-207ENST00000447873 LUZP2Q86TE4 346 aa17.14■□□□□ 0.33
SGCE-207ENST00000447873 RFLNBQ8N5W9 214 aa17.14■□□□□ 0.33
SGCE-207ENST00000447873 OR1K1Q8NGR3 316 aa17.14■□□□□ 0.33
SGCE-207ENST00000447873 TTTY10Q9BZA0 68 aa17.14■□□□□ 0.33
SGCE-207ENST00000447873 KCNN2Q9H2S1 579 aa17.14■□□□□ 0.33
SGCE-207ENST00000447873 VCX3AQ9NNX9 186 aa17.14■□□□□ 0.33
SGCE-207ENST00000447873 KLHDC2Q9Y2U9 406 aa17.14■□□□□ 0.33
SGCE-207ENST00000447873 LHFPL6Q9Y693 200 aa17.14■□□□□ 0.33
SGCE-207ENST00000447873 CIB4A0PJX0 185 aa17.13■□□□□ 0.33
SGCE-207ENST00000447873 LYZL6O75951 148 aa17.13■□□□□ 0.33
SGCE-207ENST00000447873 CLPTM1O96005 669 aa17.13■□□□□ 0.33
SGCE-207ENST00000447873 CST2P09228 141 aa17.13■□□□□ 0.33
SGCE-207ENST00000447873 UQCRFS1P47985 274 aa17.13■□□□□ 0.33
SGCE-207ENST00000447873 AQP6Q13520 282 aa17.13■□□□□ 0.33
SGCE-207ENST00000447873 ENDOGQ14249 297 aaKnown RBP17.13■□□□□ 0.33
SGCE-207ENST00000447873 SOWAHCQ53LP3 525 aaPredicted RBP17.13■□□□□ 0.33
SGCE-207ENST00000447873 ANKRD16Q6P6B7 361 aa17.13■□□□□ 0.33
SGCE-207ENST00000447873 ZNF322Q6U7Q0 402 aaPredicted RBP17.13■□□□□ 0.33
SGCE-207ENST00000447873 SSX6Q7RTT6 188 aa17.13■□□□□ 0.33
SGCE-207ENST00000447873 SLC16A14Q7RTX9 510 aa17.13■□□□□ 0.33
SGCE-207ENST00000447873 DCXRQ7Z4W1 244 aa17.13■□□□□ 0.33
SGCE-207ENST00000447873 MRGPRGQ86SM5 289 aa17.13■□□□□ 0.33
SGCE-207ENST00000447873 SKA3Q8IX90 412 aa17.13■□□□□ 0.33
SGCE-207ENST00000447873 KLHL36Q8N4N3 616 aa17.13■□□□□ 0.33
SGCE-207ENST00000447873 SNX33Q8WV41 574 aa17.13■□□□□ 0.33
SGCE-207ENST00000447873 MYCBPQ99417 103 aaPredicted RBP17.13■□□□□ 0.33
SGCE-207ENST00000447873 ZNF649Q9BS31 505 aa17.13■□□□□ 0.33
SGCE-207ENST00000447873 MND1Q9BWT6 205 aa17.13■□□□□ 0.33
SGCE-207ENST00000447873 ACOT13Q9NPJ3 140 aa17.13■□□□□ 0.33
SGCE-207ENST00000447873 TMEM129A0AVI4 362 aa17.12■□□□□ 0.33
SGCE-207ENST00000447873 LRRTM2O43300 516 aa17.12■□□□□ 0.33
SGCE-207ENST00000447873 C1QL1O75973 258 aa17.12■□□□□ 0.33
SGCE-207ENST00000447873 COX5AP20674 150 aa17.12■□□□□ 0.33
SGCE-207ENST00000447873 TBCEQ15813 527 aaPredicted RBP17.12■□□□□ 0.33
SGCE-207ENST00000447873 NEDD8Q15843 81 aa17.12■□□□□ 0.33
SGCE-207ENST00000447873 ZNF474Q6S9Z5 364 aaPredicted RBP17.12■□□□□ 0.33
SGCE-207ENST00000447873 TMPRSS11AQ6ZMR5 421 aa17.12■□□□□ 0.33
SGCE-207ENST00000447873 CXorf67Q86X51 503 aaPredicted RBP17.12■□□□□ 0.33
SGCE-207ENST00000447873 LIX1LQ8IVB5 337 aa17.12■□□□□ 0.33
SGCE-207ENST00000447873 ZNF433Q8N7K0 673 aaPredicted RBP17.12■□□□□ 0.33
SGCE-207ENST00000447873 NANOGP1Q8N7R0 232 aa17.12■□□□□ 0.33
SGCE-207ENST00000447873 ASB17Q8WXJ9 295 aa17.12■□□□□ 0.33
SGCE-207ENST00000447873 MRPL48Q96GC5 212 aaKnown RBP17.12■□□□□ 0.33
SGCE-207ENST00000447873 ABHD6Q9BV23 337 aa17.12■□□□□ 0.33
SGCE-207ENST00000447873 C1orf198Q9H425 327 aa17.12■□□□□ 0.33
SGCE-207ENST00000447873 GDF2Q9UK05 429 aaPredicted RBP17.12■□□□□ 0.33
SGCE-207ENST00000447873 TRIM64CA6NLI5 447 aa17.11■□□□□ 0.33
SGCE-207ENST00000447873 A8MXE2 369 aa17.11■□□□□ 0.33
SGCE-207ENST00000447873 RAD51DO75771 328 aa17.11■□□□□ 0.33
SGCE-207ENST00000447873 PTHP01270 115 aa17.11■□□□□ 0.33
SGCE-207ENST00000447873 PCMT1P22061 227 aa17.11■□□□□ 0.33
SGCE-207ENST00000447873 PCBD1P61457 104 aa17.11■□□□□ 0.33
SGCE-207ENST00000447873 ACTA2P62736 377 aa17.11■□□□□ 0.33
SGCE-207ENST00000447873 ACTG2P63267 376 aa17.11■□□□□ 0.33
SGCE-207ENST00000447873 KCTD18Q6PI47 426 aaPredicted RBP17.11■□□□□ 0.33
SGCE-207ENST00000447873 GJC3Q8NFK1 279 aa17.11■□□□□ 0.33
SGCE-207ENST00000447873 ST7LQ8TDW4 575 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms