RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 MAT1AQ00266 395 aaKnown RBP7.21□□□□□ -1.25
SMG1-202ENST00000446231 VITQ6UXI7 678 aa7.21□□□□□ -1.25
SMG1-202ENST00000446231 ERN2Q76MJ5 926 aaKnown RBP7.21□□□□□ -1.25
SMG1-202ENST00000446231 OR51D1Q8NGF3 324 aa7.21□□□□□ -1.25
SMG1-202ENST00000446231 METTL1Q9UBP6 276 aaKnown RBP7.21□□□□□ -1.25
SMG1-202ENST00000446231 VSIG10L2P0DP72 767 aa7.21□□□□□ -1.25
SMG1-202ENST00000446231 SFTPDP35247 375 aa7.21□□□□□ -1.25
SMG1-202ENST00000446231 REEP5Q00765 189 aa7.21□□□□□ -1.25
SMG1-202ENST00000446231 RAB30Q15771 203 aa7.21□□□□□ -1.25
SMG1-202ENST00000446231 ZNF385BQ569K4 471 aa7.21□□□□□ -1.25
SMG1-202ENST00000446231 MARCH8Q5T0T0 291 aa7.21□□□□□ -1.25
SMG1-202ENST00000446231 LILRB2Q8N423 598 aa7.21□□□□□ -1.25
SMG1-202ENST00000446231 ZFP62Q8NB50 900 aaPredicted RBP7.21□□□□□ -1.25
SMG1-202ENST00000446231 RSC1A1Q92681 617 aa7.21□□□□□ -1.25
SMG1-202ENST00000446231 TOMM40LQ969M1 308 aa7.21□□□□□ -1.25
SMG1-202ENST00000446231 UBL7Q96S82 380 aaPredicted RBP7.21□□□□□ -1.25
SMG1-202ENST00000446231 GGACTQ9BVM4 153 aa7.21□□□□□ -1.25
SMG1-202ENST00000446231 CST2P09228 141 aa7.21□□□□□ -1.25
SMG1-202ENST00000446231 RNH1P13489 461 aaKnown RBP7.21□□□□□ -1.25
SMG1-202ENST00000446231 ZNF266Q14584 549 aa7.21□□□□□ -1.25
SMG1-202ENST00000446231 TOMM20Q15388 145 aa7.21□□□□□ -1.25
SMG1-202ENST00000446231 ZNF681Q96N22 645 aa7.21□□□□□ -1.25
SMG1-202ENST00000446231 DNMT3BQ9UBC3 853 aaKnown RBP7.21□□□□□ -1.25
SMG1-202ENST00000446231 MBLAC1A4D2B0 266 aaPredicted RBP7.21□□□□□ -1.25
SMG1-202ENST00000446231 SEMG1P04279 462 aa7.21□□□□□ -1.25
SMG1-202ENST00000446231 TVP23CQ96ET8 276 aa7.21□□□□□ -1.25
SMG1-202ENST00000446231 RCC2Q9P258 522 aaKnown RBP7.21□□□□□ -1.25
SMG1-202ENST00000446231 CGGBP1Q9UFW8 167 aaPredicted RBP7.21□□□□□ -1.25
SMG1-202ENST00000446231 HIVEP2P31629 2446 aa7.21□□□□□ -1.25
SMG1-202ENST00000446231 RIMBP3CA6NJZ7 1639 aa7.21□□□□□ -1.26
SMG1-202ENST00000446231 RIMBP3BA6NNM3 1639 aa7.21□□□□□ -1.26
SMG1-202ENST00000446231 RIMBP3Q9UFD9 1639 aa7.21□□□□□ -1.26
SMG1-202ENST00000446231 ETHE1O95571 254 aa7.21□□□□□ -1.26
SMG1-202ENST00000446231 HBG1P69891 147 aa7.21□□□□□ -1.26
SMG1-202ENST00000446231 HBG2P69892 147 aa7.21□□□□□ -1.26
SMG1-202ENST00000446231 NCMAPQ5T1S8 102 aa7.21□□□□□ -1.26
SMG1-202ENST00000446231 C17orf47Q8NEP4 570 aa7.21□□□□□ -1.26
SMG1-202ENST00000446231 OR5AR1Q8NGP9 310 aa7.21□□□□□ -1.26
SMG1-202ENST00000446231 SIRT7Q9NRC8 400 aa7.21□□□□□ -1.26
SMG1-202ENST00000446231 CST4P01036 141 aa7.21□□□□□ -1.26
SMG1-202ENST00000446231 MEX3BQ6ZN04 569 aaKnown RBP7.21□□□□□ -1.26
SMG1-202ENST00000446231 STT3BQ8TCJ2 826 aa7.21□□□□□ -1.26
SMG1-202ENST00000446231 GPR119Q8TDV5 335 aa7.21□□□□□ -1.26
SMG1-202ENST00000446231 C11orf49Q9H6J7 331 aa7.21□□□□□ -1.26
SMG1-202ENST00000446231 CA10Q9NS85 328 aa7.21□□□□□ -1.26
SMG1-202ENST00000446231 PHRF1Q9P1Y6 1649 aaKnown RBP7.21□□□□□ -1.26
SMG1-202ENST00000446231 IGHA2P01877 340 aa7.21□□□□□ -1.26
SMG1-202ENST00000446231 MAKP20794 623 aa7.21□□□□□ -1.26
SMG1-202ENST00000446231 ELAVL1Q15717 326 aaKnown RBP7.21□□□□□ -1.26
SMG1-202ENST00000446231 GPX8Q8TED1 209 aa7.21□□□□□ -1.26
SMG1-202ENST00000446231 TMEM106AQ96A25 262 aa7.21□□□□□ -1.26
SMG1-202ENST00000446231 MAP3K3Q99759 626 aa7.21□□□□□ -1.26
SMG1-202ENST00000446231 PATZ1Q9HBE1 687 aaKnown RBP7.21□□□□□ -1.26
SMG1-202ENST00000446231 Q9Y3F1 56 aa7.21□□□□□ -1.26
SMG1-202ENST00000446231 GLIPR1L1Q6UWM5 242 aa7.21□□□□□ -1.26
SMG1-202ENST00000446231 STAC2Q6ZMT1 411 aa7.21□□□□□ -1.26
SMG1-202ENST00000446231 PACRGQ96M98 296 aaPredicted RBP7.21□□□□□ -1.26
SMG1-202ENST00000446231 KCND3Q9UK17 655 aa7.21□□□□□ -1.26
SMG1-202ENST00000446231 LMO7Q8WWI1 1683 aa7.21□□□□□ -1.26
SMG1-202ENST00000446231 CICQ96RK0 1608 aaPredicted RBP7.21□□□□□ -1.26
SMG1-202ENST00000446231 PPP5D1E7EU14 171 aa7.21□□□□□ -1.26
SMG1-202ENST00000446231 KIAA0040Q15053 153 aa7.21□□□□□ -1.26
SMG1-202ENST00000446231 C2orf76Q3KRA6 126 aa7.21□□□□□ -1.26
SMG1-202ENST00000446231 TTC9BQ8N6N2 239 aa7.21□□□□□ -1.26
SMG1-202ENST00000446231 CORO2AQ92828 525 aa7.21□□□□□ -1.26
SMG1-202ENST00000446231 EMG1Q92979 244 aaKnown RBP7.21□□□□□ -1.26
SMG1-202ENST00000446231 KCNJ15Q99712 375 aa7.21□□□□□ -1.26
SMG1-202ENST00000446231 EMC9Q9Y3B6 208 aa7.21□□□□□ -1.26
SMG1-202ENST00000446231 DDAH2O95865 285 aa7.21□□□□□ -1.26
SMG1-202ENST00000446231 HNF1AP20823 631 aa7.21□□□□□ -1.26
SMG1-202ENST00000446231 SLC25A1P53007 311 aa7.21□□□□□ -1.26
SMG1-202ENST00000446231 EXOSC7Q15024 291 aaKnown RBP7.21□□□□□ -1.26
SMG1-202ENST00000446231 AWAT1Q58HT5 328 aa7.21□□□□□ -1.26
SMG1-202ENST00000446231 MAMSTRQ6ZN01 415 aa7.21□□□□□ -1.26
SMG1-202ENST00000446231 OR14L1PQ8NHC6 308 aa7.21□□□□□ -1.26
SMG1-202ENST00000446231 CPEB1Q9BZB8 566 aaKnown RBP7.21□□□□□ -1.26
SMG1-202ENST00000446231 AK3Q9UIJ7 227 aa7.21□□□□□ -1.26
SMG1-202ENST00000446231 PADI1Q9ULC6 663 aa7.21□□□□□ -1.26
SMG1-202ENST00000446231 GFYI3L273 518 aa7.21□□□□□ -1.26
SMG1-202ENST00000446231 SIGLEC5O15389 551 aa7.21□□□□□ -1.26
SMG1-202ENST00000446231 SIGLEC14Q08ET2 396 aa7.21□□□□□ -1.26
SMG1-202ENST00000446231 EXOSC6Q5RKV6 272 aaKnown RBP7.21□□□□□ -1.26
SMG1-202ENST00000446231 TMEM182Q6ZP80 229 aaPredicted RBP7.21□□□□□ -1.26
SMG1-202ENST00000446231 TMEM217Q8N7C4 229 aa7.21□□□□□ -1.26
SMG1-202ENST00000446231 TMEM229BQ8NBD8 167 aa7.21□□□□□ -1.26
SMG1-202ENST00000446231 MED1Q15648 1581 aaPredicted RBP7.21□□□□□ -1.26
SMG1-202ENST00000446231 NWD2Q9ULI1 1742 aa7.21□□□□□ -1.26
SMG1-202ENST00000446231 PXNP49023 591 aaPredicted RBP7.21□□□□□ -1.26
SMG1-202ENST00000446231 DCAF12L2Q5VW00 463 aa7.21□□□□□ -1.26
SMG1-202ENST00000446231 PUSL1Q8N0Z8 303 aaKnown RBP7.21□□□□□ -1.26
SMG1-202ENST00000446231 CLDND1Q9NY35 253 aa7.21□□□□□ -1.26
SMG1-202ENST00000446231 GABRQQ9UN88 632 aa7.21□□□□□ -1.26
SMG1-202ENST00000446231 E5RGE8 158 aa7.2□□□□□ -1.26
SMG1-202ENST00000446231 H7C1C5 153 aa7.2□□□□□ -1.26
SMG1-202ENST00000446231 ZNF728P0DKX0 622 aa7.2□□□□□ -1.26
SMG1-202ENST00000446231 ABOP16442 354 aa7.2□□□□□ -1.26
SMG1-202ENST00000446231 LCN6P62502 163 aa7.2□□□□□ -1.26
SMG1-202ENST00000446231 C9orf131Q5VYM1 1079 aa7.2□□□□□ -1.26
SMG1-202ENST00000446231 LAIR1Q6GTX8 287 aa7.2□□□□□ -1.26
SMG1-202ENST00000446231 KLF16Q9BXK1 252 aaPredicted RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms