RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 OR5L1Q8NGL2 311 aa6.65□□□□□ -1.34
CD44-211ENST00000442151 CLDND2Q8NHS1 167 aa6.65□□□□□ -1.34
CD44-211ENST00000442151 ST7LQ8TDW4 575 aa6.65□□□□□ -1.34
CD44-211ENST00000442151 TMEM255BQ8WV15 326 aa6.65□□□□□ -1.34
CD44-211ENST00000442151 ACOT11Q8WXI4 607 aaPredicted RBP6.65□□□□□ -1.34
CD44-211ENST00000442151 LRRC37BQ96QE4 947 aa6.65□□□□□ -1.34
CD44-211ENST00000442151 DCLRE1CQ96SD1 692 aaKnown RBP6.65□□□□□ -1.34
CD44-211ENST00000442151 WFDC6Q9BQY6 131 aa6.65□□□□□ -1.34
CD44-211ENST00000442151 RSPO3Q9BXY4 272 aaPredicted RBP6.65□□□□□ -1.34
CD44-211ENST00000442151 SAP30LQ9HAJ7 183 aa6.65□□□□□ -1.34
CD44-211ENST00000442151 MAN2C1Q9NTJ4 1040 aa6.65□□□□□ -1.34
CD44-211ENST00000442151 HIF1ANQ9NWT6 349 aa6.65□□□□□ -1.34
CD44-211ENST00000442151 A0A0G2JMP0 313 aa6.64□□□□□ -1.35
CD44-211ENST00000442151 A0A0X1KG70 313 aa6.64□□□□□ -1.35
CD44-211ENST00000442151 C5orf49A4QMS7 147 aa6.64□□□□□ -1.35
CD44-211ENST00000442151 ADH4P08319 380 aa6.64□□□□□ -1.35
CD44-211ENST00000442151 MMP7P09237 267 aaPredicted RBP6.64□□□□□ -1.35
CD44-211ENST00000442151 PATE4P0C8F1 98 aa6.64□□□□□ -1.35
CD44-211ENST00000442151 GAAP10253 952 aa6.64□□□□□ -1.35
CD44-211ENST00000442151 H2AFXP16104 143 aaPredicted RBP6.64□□□□□ -1.35
CD44-211ENST00000442151 ITGA2P17301 1181 aa6.64□□□□□ -1.35
CD44-211ENST00000442151 TNFRSF1AP19438 455 aa6.64□□□□□ -1.35
CD44-211ENST00000442151 MSR1P21757 451 aa6.64□□□□□ -1.35
CD44-211ENST00000442151 RPL4P36578 427 aaKnown RBP6.64□□□□□ -1.35
CD44-211ENST00000442151 IFNGR2P38484 337 aa6.64□□□□□ -1.35
CD44-211ENST00000442151 LIMS1P48059 325 aa6.64□□□□□ -1.35
CD44-211ENST00000442151 RGS6P49758 472 aa6.64□□□□□ -1.35
CD44-211ENST00000442151 RABL3Q5HYI8 236 aa6.64□□□□□ -1.35
CD44-211ENST00000442151 LRP11Q86VZ4 500 aa6.64□□□□□ -1.35
CD44-211ENST00000442151 ZNF584Q8IVC4 421 aa6.64□□□□□ -1.35
CD44-211ENST00000442151 OR4M2Q8NGB6 313 aa6.64□□□□□ -1.35
CD44-211ENST00000442151 CMTM5Q96DZ9 223 aa6.64□□□□□ -1.35
CD44-211ENST00000442151 RBM4Q9BWF3 364 aaKnown RBP6.64□□□□□ -1.35
CD44-211ENST00000442151 SUCNR1Q9BXA5 334 aa6.64□□□□□ -1.35
CD44-211ENST00000442151 RACGAP1Q9H0H5 632 aa6.64□□□□□ -1.35
CD44-211ENST00000442151 ZNF665Q9H7R5 613 aa6.64□□□□□ -1.35
CD44-211ENST00000442151 TBCCD1Q9NVR7 557 aa6.64□□□□□ -1.35
CD44-211ENST00000442151 LYNX1G3V0Z9 82 aa6.64□□□□□ -1.35
CD44-211ENST00000442151 J3QW42 95 aa6.64□□□□□ -1.35
CD44-211ENST00000442151 CXCR6O00574 342 aa6.64□□□□□ -1.35
CD44-211ENST00000442151 KHDRBS3O75525 346 aaKnown RBP6.64□□□□□ -1.35
CD44-211ENST00000442151 FOXH1O75593 365 aa6.64□□□□□ -1.35
CD44-211ENST00000442151 PNPP00491 289 aa6.64□□□□□ -1.35
CD44-211ENST00000442151 CD14P08571 375 aa6.64□□□□□ -1.35
CD44-211ENST00000442151 LYNX1P0DP58 116 aa6.64□□□□□ -1.35
CD44-211ENST00000442151 ZNF32P17041 273 aa6.64□□□□□ -1.35
CD44-211ENST00000442151 OR1E2P47887 323 aa6.64□□□□□ -1.35
CD44-211ENST00000442151 PPP1CBP62140 327 aa6.64□□□□□ -1.35
CD44-211ENST00000442151 CCL8P80075 99 aa6.64□□□□□ -1.35
CD44-211ENST00000442151 CCNIQ14094 377 aa6.64□□□□□ -1.35
CD44-211ENST00000442151 MAD2L1BPQ15013 274 aaPredicted RBP6.64□□□□□ -1.35
CD44-211ENST00000442151 ZBED5Q49AG3 693 aa6.64□□□□□ -1.35
CD44-211ENST00000442151 FAHD2BQ6P2I3 314 aaPredicted RBP6.64□□□□□ -1.35
CD44-211ENST00000442151 C12orf54Q6X4T0 127 aa6.64□□□□□ -1.35
CD44-211ENST00000442151 HACD2Q6Y1H2 254 aa6.64□□□□□ -1.35
CD44-211ENST00000442151 TMPRSS11FQ6ZWK6 438 aa6.64□□□□□ -1.35
CD44-211ENST00000442151 MBOAT2Q6ZWT7 520 aa6.64□□□□□ -1.35
CD44-211ENST00000442151 USP43Q70EL4 1123 aa6.64□□□□□ -1.35
CD44-211ENST00000442151 CBLL1Q75N03 491 aa6.64□□□□□ -1.35
CD44-211ENST00000442151 MOSPD2Q8NHP6 518 aa6.64□□□□□ -1.35
CD44-211ENST00000442151 PFN4Q8NHR9 129 aa6.64□□□□□ -1.35
CD44-211ENST00000442151 NANPQ8TBE9 248 aa6.64□□□□□ -1.35
CD44-211ENST00000442151 NSMAFQ92636 917 aa6.64□□□□□ -1.35
CD44-211ENST00000442151 HDAC2Q92769 488 aaKnown RBP6.64□□□□□ -1.35
CD44-211ENST00000442151 PTP4A1Q93096 173 aa6.64□□□□□ -1.35
CD44-211ENST00000442151 FAHD2AQ96GK7 314 aa6.64□□□□□ -1.35
CD44-211ENST00000442151 POM121L2Q96KW2 1035 aa6.64□□□□□ -1.35
CD44-211ENST00000442151 C4orf45Q96LM5 186 aa6.64□□□□□ -1.35
CD44-211ENST00000442151 TPSG1Q9NRR2 321 aa6.64□□□□□ -1.35
CD44-211ENST00000442151 TREM2Q9NZC2 230 aa6.64□□□□□ -1.35
CD44-211ENST00000442151 FZR1Q9UM11 496 aa6.64□□□□□ -1.35
CD44-211ENST00000442151 PCDHB10Q9UN67 800 aa6.64□□□□□ -1.35
CD44-211ENST00000442151 AURKCQ9UQB9 309 aa6.64□□□□□ -1.35
CD44-211ENST00000442151 A0A1W2PPL8 197 aa6.63□□□□□ -1.35
CD44-211ENST00000442151 TIMM8AO60220 97 aaPredicted RBP6.63□□□□□ -1.35
CD44-211ENST00000442151 ICMTO60725 284 aa6.63□□□□□ -1.35
CD44-211ENST00000442151 NDUFB2O95178 105 aa6.63□□□□□ -1.35
CD44-211ENST00000442151 MPZL1O95297 269 aa6.63□□□□□ -1.35
CD44-211ENST00000442151 ZNF682O95780 498 aa6.63□□□□□ -1.35
CD44-211ENST00000442151 ABHD16AO95870 558 aa6.63□□□□□ -1.35
CD44-211ENST00000442151 CLPTM1O96005 669 aa6.63□□□□□ -1.35
CD44-211ENST00000442151 CD55P08174 381 aa6.63□□□□□ -1.35
CD44-211ENST00000442151 LAP3P28838 519 aa6.63□□□□□ -1.35
CD44-211ENST00000442151 CRABP1P29762 137 aa6.63□□□□□ -1.35
CD44-211ENST00000442151 RPS6KA3P51812 740 aa6.63□□□□□ -1.35
CD44-211ENST00000442151 SLC7A2P52569 658 aa6.63□□□□□ -1.35
CD44-211ENST00000442151 LSM6P62312 80 aaKnown RBP6.63□□□□□ -1.35
CD44-211ENST00000442151 PSG4Q00888 419 aa6.63□□□□□ -1.35
CD44-211ENST00000442151 LIPEQ05469 1076 aa6.63□□□□□ -1.35
CD44-211ENST00000442151 TOP3AQ13472 1001 aaPredicted RBP6.63□□□□□ -1.35
CD44-211ENST00000442151 TRIP10Q15642 601 aa6.63□□□□□ -1.35
CD44-211ENST00000442151 TSTQ16762 297 aaKnown RBP6.63□□□□□ -1.35
CD44-211ENST00000442151 KRTAP24-1Q3LI83 254 aa6.63□□□□□ -1.35
CD44-211ENST00000442151 SLC36A3Q495N2 470 aa6.63□□□□□ -1.35
CD44-211ENST00000442151 MTX3Q5HYI7 312 aa6.63□□□□□ -1.35
CD44-211ENST00000442151 RBMS3Q6XE24 437 aaKnown RBP6.63□□□□□ -1.35
CD44-211ENST00000442151 RINLQ6ZS11 566 aa6.63□□□□□ -1.35
CD44-211ENST00000442151 FOXL2NBQ6ZUU3 175 aa6.63□□□□□ -1.35
CD44-211ENST00000442151 USP51Q70EK9 711 aa6.63□□□□□ -1.35
CD44-211ENST00000442151 SPICQ8N5J4 248 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms