RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 MECP2P51608 486 aaKnown RBP6.59□□□□□ -1.35
CDC42BPA-208ENST00000442054 ST3GAL3Q11203 375 aa6.59□□□□□ -1.35
CDC42BPA-208ENST00000442054 KLF9Q13886 244 aaPredicted RBP6.59□□□□□ -1.35
CDC42BPA-208ENST00000442054 ZSWIM7Q19AV6 140 aa6.59□□□□□ -1.35
CDC42BPA-208ENST00000442054 SLC25A35Q3KQZ1 300 aa6.59□□□□□ -1.35
CDC42BPA-208ENST00000442054 B3GLCTQ6Y288 498 aa6.59□□□□□ -1.35
CDC42BPA-208ENST00000442054 ESPNLQ6ZVH7 1005 aa6.59□□□□□ -1.35
CDC42BPA-208ENST00000442054 LRRC28Q86X40 367 aaPredicted RBP6.59□□□□□ -1.35
CDC42BPA-208ENST00000442054 ACOT12Q8WYK0 555 aa6.59□□□□□ -1.35
CDC42BPA-208ENST00000442054 C1GALT1C1Q96EU7 318 aa6.59□□□□□ -1.35
CDC42BPA-208ENST00000442054 CEP19Q96LK0 163 aa6.59□□□□□ -1.35
CDC42BPA-208ENST00000442054 VSTM2LQ96N03 204 aa6.59□□□□□ -1.35
CDC42BPA-208ENST00000442054 C1QTNF6Q9BXI9 259 aa6.59□□□□□ -1.35
CDC42BPA-208ENST00000442054 ANGPTL4Q9BY76 406 aa6.59□□□□□ -1.35
CDC42BPA-208ENST00000442054 FLRT3Q9NZU0 649 aa6.59□□□□□ -1.35
CDC42BPA-208ENST00000442054 NLKQ9UBE8 527 aa6.59□□□□□ -1.35
CDC42BPA-208ENST00000442054 ZNF337Q9Y3M9 751 aa6.59□□□□□ -1.35
CDC42BPA-208ENST00000442054 NAV3Q8IVL0 2385 aa6.59□□□□□ -1.35
CDC42BPA-208ENST00000442054 PRR32B1ATL7 298 aa6.59□□□□□ -1.36
CDC42BPA-208ENST00000442054 TFP02787 698 aa6.59□□□□□ -1.36
CDC42BPA-208ENST00000442054 IGKV3-11P04433 115 aa6.59□□□□□ -1.36
CDC42BPA-208ENST00000442054 HLA-DPB1P04440 258 aa6.59□□□□□ -1.36
CDC42BPA-208ENST00000442054 ERCC1P07992 297 aaPredicted RBP6.59□□□□□ -1.36
CDC42BPA-208ENST00000442054 IFNGR2P38484 337 aa6.59□□□□□ -1.36
CDC42BPA-208ENST00000442054 CD83Q01151 205 aa6.59□□□□□ -1.36
CDC42BPA-208ENST00000442054 DHODHQ02127 395 aa6.59□□□□□ -1.36
CDC42BPA-208ENST00000442054 FOXF1Q12946 379 aa6.59□□□□□ -1.36
CDC42BPA-208ENST00000442054 MRPL2Q5T653 305 aaKnown RBP6.59□□□□□ -1.36
CDC42BPA-208ENST00000442054 ABHD12BQ7Z5M8 362 aaPredicted RBP6.59□□□□□ -1.36
CDC42BPA-208ENST00000442054 DOLPP1Q86YN1 238 aa6.59□□□□□ -1.36
CDC42BPA-208ENST00000442054 CPOQ8IVL8 374 aa6.59□□□□□ -1.36
CDC42BPA-208ENST00000442054 ZNF615Q8N8J6 731 aa6.59□□□□□ -1.36
CDC42BPA-208ENST00000442054 SLC25A43Q8WUT9 341 aaPredicted RBP6.59□□□□□ -1.36
CDC42BPA-208ENST00000442054 ZBTB8AQ96BR9 441 aa6.59□□□□□ -1.36
CDC42BPA-208ENST00000442054 ARL5BQ96KC2 179 aa6.59□□□□□ -1.36
CDC42BPA-208ENST00000442054 SAMD8Q96LT4 415 aa6.59□□□□□ -1.36
CDC42BPA-208ENST00000442054 SORCS2Q96PQ0 1159 aa6.59□□□□□ -1.36
CDC42BPA-208ENST00000442054 TMED9Q9BVK6 235 aa6.59□□□□□ -1.36
CDC42BPA-208ENST00000442054 NMNAT2Q9BZQ4 307 aa6.59□□□□□ -1.36
CDC42BPA-208ENST00000442054 PLEKHA1Q9HB21 404 aa6.59□□□□□ -1.36
CDC42BPA-208ENST00000442054 MCUBQ9NWR8 336 aa6.59□□□□□ -1.36
CDC42BPA-208ENST00000442054 KLHL13Q9P2N7 655 aa6.59□□□□□ -1.36
CDC42BPA-208ENST00000442054 SLC7A7Q9UM01 511 aa6.59□□□□□ -1.36
CDC42BPA-208ENST00000442054 TMED7-TICAM2A0A0A6YYA0 188 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 IGHV3-15A0A0B4J1V0 119 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 TRAV1-2A0A0B4J238 106 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 A0A0G2JMM0 328 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 A0A1W2PPB8 328 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 A0A1W2PRS3 328 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 KIR3DP1A8MWS1 328 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 NPIPB9F8W1W9 429 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 SUSD5O60279 629 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 NKX2-2O95096 273 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 CTSSP25774 331 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 SHC1P29353 583 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 ACAA2P42765 397 aaKnown RBP6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 MMP15P51511 669 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 PSG6Q00889 435 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 FGFBP1Q14512 234 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 TMEM44Q2T9K0 475 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 PYDC2Q56P42 97 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 TMEM255AQ5JRV8 349 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 UTS2BQ765I0 119 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 FCRLAQ7L513 359 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 KLBQ86Z14 1044 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 RNF113BQ8IZP6 322 aaKnown RBP6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 KLHL36Q8N4N3 616 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 MDS2Q8NDY4 140 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 OR10D3Q8NH80 312 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 TEX47Q8TBZ9 253 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 MIB2Q96AX9 1013 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 MED20Q9H944 212 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 INPP5EQ9NRR6 644 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 COMMD3Q9UBI1 195 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 CHRNA9Q9UGM1 479 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 TMED7Q9Y3B3 224 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 USF3Q68DE3 2245 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 FAM183AA6NL82 134 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 EIF1BO60739 113 aaKnown RBP6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 TMCC2O75069 709 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 CT45A8P0DMV1 189 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 CT45A9P0DMV2 189 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 MYL12AP19105 171 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 CELP19835 753 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 CXCL3P19876 107 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 CFPP27918 469 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 SLC35A1P78382 337 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 CT45A2Q5DJT8 189 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 CLEC12AQ5QGZ9 265 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 ARSKQ6UWY0 536 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 ZNF782Q6ZMW2 699 aaPredicted RBP6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 ZAR1Q86SH2 424 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 SLC43A2Q8N370 569 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 ZNF441Q8N8Z8 693 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 OR10H5Q8NGA6 315 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 OR5H6Q8NGV6 325 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 CPNE4Q96A23 557 aaPredicted RBP6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 TMEM41AQ96HV5 264 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 TEAD3Q99594 435 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 OR52D1Q9H346 318 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms