RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 OR1J4Q8NGS1 313 aa12.23□□□□□ -0.45
PCNX3-202ENST00000439247 ZNF417Q8TAU3 575 aa12.23□□□□□ -0.45
PCNX3-202ENST00000439247 MRGPRFQ96AM1 343 aa12.23□□□□□ -0.45
PCNX3-202ENST00000439247 MRPL48Q96GC5 212 aaKnown RBP12.23□□□□□ -0.45
PCNX3-202ENST00000439247 MRI1Q9BV20 369 aa12.23□□□□□ -0.45
PCNX3-202ENST00000439247 RAB11FIP5Q9BXF6 653 aa12.23□□□□□ -0.45
PCNX3-202ENST00000439247 PILRAQ9UKJ1 303 aa12.23□□□□□ -0.45
PCNX3-202ENST00000439247 TMEM265A0A087WTH1 108 aa12.22□□□□□ -0.45
PCNX3-202ENST00000439247 MBTPS2O43462 519 aa12.22□□□□□ -0.45
PCNX3-202ENST00000439247 HCRTR1O43613 425 aa12.22□□□□□ -0.45
PCNX3-202ENST00000439247 APOC1P02654 83 aa12.22□□□□□ -0.45
PCNX3-202ENST00000439247 VAMP1P23763 118 aa12.22□□□□□ -0.45
PCNX3-202ENST00000439247 PTGFRP43088 359 aa12.22□□□□□ -0.45
PCNX3-202ENST00000439247 CENPAP49450 140 aa12.22□□□□□ -0.45
PCNX3-202ENST00000439247 CCR4P51679 360 aa12.22□□□□□ -0.45
PCNX3-202ENST00000439247 TAS2R19P59542 299 aa12.22□□□□□ -0.45
PCNX3-202ENST00000439247 RPS15AP62244 130 aaKnown RBP12.22□□□□□ -0.45
PCNX3-202ENST00000439247 GLYATL3Q5SZD4 288 aa12.22□□□□□ -0.45
PCNX3-202ENST00000439247 DHRS7BQ6IAN0 325 aaPredicted RBP12.22□□□□□ -0.45
PCNX3-202ENST00000439247 CDC20BQ86Y33 519 aa12.22□□□□□ -0.45
PCNX3-202ENST00000439247 LINC00469Q8N7U9 141 aa12.22□□□□□ -0.45
PCNX3-202ENST00000439247 ADAD2Q8NCV1 583 aaKnown RBP12.22□□□□□ -0.45
PCNX3-202ENST00000439247 WFIKKN2Q8TEU8 576 aa12.22□□□□□ -0.45
PCNX3-202ENST00000439247 MCHR2Q969V1 340 aa12.22□□□□□ -0.45
PCNX3-202ENST00000439247 COMMD4Q9H0A8 199 aa12.22□□□□□ -0.45
PCNX3-202ENST00000439247 RSPH9Q9H1X1 276 aaPredicted RBP12.22□□□□□ -0.45
PCNX3-202ENST00000439247 SYT4Q9H2B2 425 aa12.22□□□□□ -0.45
PCNX3-202ENST00000439247 FGF22Q9HCT0 170 aa12.22□□□□□ -0.45
PCNX3-202ENST00000439247 MRPS18BQ9Y676 258 aaKnown RBP12.22□□□□□ -0.45
PCNX3-202ENST00000439247 FANCMQ8IYD8 2048 aa12.22□□□□□ -0.45
PCNX3-202ENST00000439247 ARHGEF17Q96PE2 2063 aaPredicted RBP12.22□□□□□ -0.45
PCNX3-202ENST00000439247 MUC22E2RYF6 1773 aaPredicted RBP12.22□□□□□ -0.45
PCNX3-202ENST00000439247 A0A087WUJ7 227 aa12.22□□□□□ -0.45
PCNX3-202ENST00000439247 ARPC4-TTLL3A0A0A6YYG9 625 aa12.22□□□□□ -0.45
PCNX3-202ENST00000439247 GPR75O95800 540 aa12.22□□□□□ -0.45
PCNX3-202ENST00000439247 SMIM10L1P0DMW3 83 aa12.22□□□□□ -0.45
PCNX3-202ENST00000439247 EXD3Q8N9H8 876 aa12.22□□□□□ -0.45
PCNX3-202ENST00000439247 ACBD4Q8NC06 268 aa12.22□□□□□ -0.45
PCNX3-202ENST00000439247 RCBTB1Q8NDN9 531 aa12.22□□□□□ -0.45
PCNX3-202ENST00000439247 OR1M1Q8NGA1 313 aa12.22□□□□□ -0.45
PCNX3-202ENST00000439247 ELP5Q8TE02 316 aa12.22□□□□□ -0.45
PCNX3-202ENST00000439247 SMIM10Q96HG1 83 aa12.22□□□□□ -0.45
PCNX3-202ENST00000439247 GUCD1Q96NT3 240 aa12.22□□□□□ -0.45
PCNX3-202ENST00000439247 ALX4Q9H161 411 aaPredicted RBP12.22□□□□□ -0.45
PCNX3-202ENST00000439247 LOC100289279A0A1B0GTE1 492 aa12.22□□□□□ -0.45
PCNX3-202ENST00000439247 C17orf51A8MQB3 221 aa12.22□□□□□ -0.45
PCNX3-202ENST00000439247 ZNF736B4DX44 427 aaPredicted RBP12.22□□□□□ -0.45
PCNX3-202ENST00000439247 CYR61O00622 381 aa12.22□□□□□ -0.45
PCNX3-202ENST00000439247 ARPC3O15145 178 aa12.22□□□□□ -0.45
PCNX3-202ENST00000439247 OIP5O43482 229 aa12.22□□□□□ -0.45
PCNX3-202ENST00000439247 CDC40O60508 579 aaKnown RBP eCLIP12.22□□□□□ -0.45
PCNX3-202ENST00000439247 PRKXP51817 358 aa12.22□□□□□ -0.45
PCNX3-202ENST00000439247 TFF2Q03403 129 aa12.22□□□□□ -0.45
PCNX3-202ENST00000439247 EIF2B1Q14232 305 aaKnown RBP12.22□□□□□ -0.45
PCNX3-202ENST00000439247 TGIF1Q15583 401 aa12.22□□□□□ -0.45
PCNX3-202ENST00000439247 POMZP3Q6PJE2 187 aa12.22□□□□□ -0.45
PCNX3-202ENST00000439247 FAM122BQ7Z309 247 aa12.22□□□□□ -0.45
PCNX3-202ENST00000439247 SFTPA2Q8IWL1 248 aa12.22□□□□□ -0.45
PCNX3-202ENST00000439247 CCDC36Q8IYA8 594 aa12.22□□□□□ -0.45
PCNX3-202ENST00000439247 RRNAD1Q96FB5 475 aaKnown RBP12.22□□□□□ -0.45
PCNX3-202ENST00000439247 POTEKPQ9BYX7 375 aa12.22□□□□□ -0.45
PCNX3-202ENST00000439247 SRMSQ9H3Y6 488 aa12.22□□□□□ -0.45
PCNX3-202ENST00000439247 PHPT1Q9NRX4 125 aaPredicted RBP12.22□□□□□ -0.45
PCNX3-202ENST00000439247 SLC31A1O15431 190 aa12.21□□□□□ -0.45
PCNX3-202ENST00000439247 SGCEO43556 437 aa12.21□□□□□ -0.45
PCNX3-202ENST00000439247 ICOSLGO75144 302 aa12.21□□□□□ -0.45
PCNX3-202ENST00000439247 NKX2-2O95096 273 aa12.21□□□□□ -0.45
PCNX3-202ENST00000439247 CSTAP01040 98 aa12.21□□□□□ -0.45
PCNX3-202ENST00000439247 AKR1C4P17516 323 aa12.21□□□□□ -0.45
PCNX3-202ENST00000439247 POLR2GP62487 172 aaKnown RBP eCLIP12.21□□□□□ -0.45
PCNX3-202ENST00000439247 ERV3-1Q14264 604 aa12.21□□□□□ -0.45
PCNX3-202ENST00000439247 ZNF345Q14585 488 aa12.21□□□□□ -0.45
PCNX3-202ENST00000439247 MESTQ5EB52 335 aa12.21□□□□□ -0.45
PCNX3-202ENST00000439247 SLC29A4Q7RTT9 530 aa12.21□□□□□ -0.45
PCNX3-202ENST00000439247 SPAG16Q8N0X2 631 aa12.21□□□□□ -0.45
PCNX3-202ENST00000439247 ARMC10Q8N2F6 343 aa12.21□□□□□ -0.45
PCNX3-202ENST00000439247 NUBPLQ8TB37 319 aa12.21□□□□□ -0.45
PCNX3-202ENST00000439247 CMKLR1Q99788 373 aa12.21□□□□□ -0.45
PCNX3-202ENST00000439247 HRH4Q9H3N8 390 aa12.21□□□□□ -0.45
PCNX3-202ENST00000439247 SEMA6CQ9H3T2 930 aa12.21□□□□□ -0.45
PCNX3-202ENST00000439247 ELOVL3Q9HB03 270 aa12.21□□□□□ -0.45
PCNX3-202ENST00000439247 TAS2R4Q9NYW5 299 aa12.21□□□□□ -0.45
PCNX3-202ENST00000439247 TRBV23-1A0A0A0MS06 115 aa12.21□□□□□ -0.46
PCNX3-202ENST00000439247 A0A0A6YYC8 382 aaPredicted RBP12.21□□□□□ -0.46
PCNX3-202ENST00000439247 I3L1I5 382 aaPredicted RBP12.21□□□□□ -0.46
PCNX3-202ENST00000439247 AGPAT2O15120 278 aa12.21□□□□□ -0.46
PCNX3-202ENST00000439247 OR10H2O60403 315 aa12.21□□□□□ -0.46
PCNX3-202ENST00000439247 LMX1BO60663 402 aa12.21□□□□□ -0.46
PCNX3-202ENST00000439247 CYB5AP00167 134 aa12.21□□□□□ -0.46
PCNX3-202ENST00000439247 ALOX5APP20292 161 aa12.21□□□□□ -0.46
PCNX3-202ENST00000439247 CXADRP78310 365 aa12.21□□□□□ -0.46
PCNX3-202ENST00000439247 DCDP81605 110 aaKnown RBP12.21□□□□□ -0.46
PCNX3-202ENST00000439247 MICBQ29980 383 aa12.21□□□□□ -0.46
PCNX3-202ENST00000439247 CDNFQ49AH0 187 aa12.21□□□□□ -0.46
PCNX3-202ENST00000439247 ALG10Q5BKT4 473 aa12.21□□□□□ -0.46
PCNX3-202ENST00000439247 NPSR1Q6W5P4 371 aa12.21□□□□□ -0.46
PCNX3-202ENST00000439247 INO80EQ8NBZ0 244 aaPredicted RBP12.21□□□□□ -0.46
PCNX3-202ENST00000439247 ANKRD9Q96BM1 317 aaPredicted RBP12.21□□□□□ -0.46
PCNX3-202ENST00000439247 C4orf45Q96LM5 186 aa12.21□□□□□ -0.46
PCNX3-202ENST00000439247 HDAC8Q9BY41 377 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms