RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 ITGB7P26010 798 aa10.63□□□□□ -0.71
PTCH1-209ENST00000437951 HTR5AP47898 357 aa10.63□□□□□ -0.71
PTCH1-209ENST00000437951 SLC10A2Q12908 348 aaPredicted RBP10.63□□□□□ -0.71
PTCH1-209ENST00000437951 GDPD3Q7L5L3 318 aa10.63□□□□□ -0.71
PTCH1-209ENST00000437951 ZNF547Q8IVP9 402 aa10.63□□□□□ -0.71
PTCH1-209ENST00000437951 STPG2Q8N412 459 aa10.63□□□□□ -0.71
PTCH1-209ENST00000437951 CA14Q9ULX7 337 aa10.63□□□□□ -0.71
PTCH1-209ENST00000437951 CPMP14384 443 aa10.63□□□□□ -0.71
PTCH1-209ENST00000437951 EMP3P54852 163 aa10.63□□□□□ -0.71
PTCH1-209ENST00000437951 NHLH1Q02575 133 aa10.63□□□□□ -0.71
PTCH1-209ENST00000437951 NHLH2Q02577 135 aa10.63□□□□□ -0.71
PTCH1-209ENST00000437951 FXNQ16595 210 aa10.63□□□□□ -0.71
PTCH1-209ENST00000437951 PRR27Q6MZM9 219 aa10.63□□□□□ -0.71
PTCH1-209ENST00000437951 KLRG1Q96E93 195 aa10.63□□□□□ -0.71
PTCH1-209ENST00000437951 SAT2Q96F10 170 aaPredicted RBP10.63□□□□□ -0.71
PTCH1-209ENST00000437951 SLC35A4Q96G79 324 aa10.63□□□□□ -0.71
PTCH1-209ENST00000437951 SCN1AP35498 2009 aa10.62□□□□□ -0.71
PTCH1-209ENST00000437951 LRRC30A6NM36 301 aa10.62□□□□□ -0.71
PTCH1-209ENST00000437951 OTX2P32243 289 aa10.62□□□□□ -0.71
PTCH1-209ENST00000437951 GPM6AP51674 278 aa10.62□□□□□ -0.71
PTCH1-209ENST00000437951 PCBP4P57723 403 aaKnown RBP10.62□□□□□ -0.71
PTCH1-209ENST00000437951 SMN1Q16637 294 aaKnown RBP10.62□□□□□ -0.71
PTCH1-209ENST00000437951 OR14A16Q8NHC5 309 aa10.62□□□□□ -0.71
PTCH1-209ENST00000437951 RPUSD4Q96CM3 377 aaKnown RBP10.62□□□□□ -0.71
PTCH1-209ENST00000437951 EMC9Q9Y3B6 208 aa10.62□□□□□ -0.71
PTCH1-209ENST00000437951 TRAV36DV7A0A075B6V5 113 aa10.62□□□□□ -0.71
PTCH1-209ENST00000437951 TMX2-CTNND1H3BSU7 103 aa10.62□□□□□ -0.71
PTCH1-209ENST00000437951 OR10J1P30954 320 aa10.62□□□□□ -0.71
PTCH1-209ENST00000437951 CSF2RBP32927 897 aa10.62□□□□□ -0.71
PTCH1-209ENST00000437951 CGB2Q6NT52 195 aa10.62□□□□□ -0.71
PTCH1-209ENST00000437951 ZNF343Q6P1L6 599 aa10.62□□□□□ -0.71
PTCH1-209ENST00000437951 DOK3Q7L591 496 aa10.62□□□□□ -0.71
PTCH1-209ENST00000437951 SLC16A14Q7RTX9 510 aa10.62□□□□□ -0.71
PTCH1-209ENST00000437951 BRWD1Q9NSI6 2320 aa10.62□□□□□ -0.71
PTCH1-209ENST00000437951 H3BML4 177 aa10.62□□□□□ -0.71
PTCH1-209ENST00000437951 YIF1AO95070 293 aa10.62□□□□□ -0.71
PTCH1-209ENST00000437951 PPOXP50336 477 aa10.62□□□□□ -0.71
PTCH1-209ENST00000437951 ZXDBP98169 803 aa10.62□□□□□ -0.71
PTCH1-209ENST00000437951 SQSTM1Q13501 440 aa10.62□□□□□ -0.71
PTCH1-209ENST00000437951 PLAC9Q5JTB6 97 aa10.62□□□□□ -0.71
PTCH1-209ENST00000437951 MRPL2Q5T653 305 aaKnown RBP10.62□□□□□ -0.71
PTCH1-209ENST00000437951 TMEM123Q8N131 208 aa10.62□□□□□ -0.71
PTCH1-209ENST00000437951 GABARAPL3Q9BY60 117 aa10.62□□□□□ -0.71
PTCH1-209ENST00000437951 FLVCR1Q9Y5Y0 555 aa10.62□□□□□ -0.71
PTCH1-209ENST00000437951 EIF1BO60739 113 aaKnown RBP10.62□□□□□ -0.71
PTCH1-209ENST00000437951 RNGTTO60942 597 aaKnown RBP10.62□□□□□ -0.71
PTCH1-209ENST00000437951 GSTP1P09211 210 aaKnown RBP10.62□□□□□ -0.71
PTCH1-209ENST00000437951 ARG2P78540 354 aa10.62□□□□□ -0.71
PTCH1-209ENST00000437951 RPEL1Q2QD12 228 aa10.62□□□□□ -0.71
PTCH1-209ENST00000437951 POMT2Q9UKY4 750 aa10.62□□□□□ -0.71
PTCH1-209ENST00000437951 GABRQQ9UN88 632 aa10.62□□□□□ -0.71
PTCH1-209ENST00000437951 TRAPPC4Q9Y296 219 aa10.62□□□□□ -0.71
PTCH1-209ENST00000437951 LNP1A1A4G5 178 aa10.62□□□□□ -0.71
PTCH1-209ENST00000437951 TSPAN12O95859 305 aa10.62□□□□□ -0.71
PTCH1-209ENST00000437951 OR4E1P0C645 316 aa10.62□□□□□ -0.71
PTCH1-209ENST00000437951 STAG3L3P0CL85 134 aa10.62□□□□□ -0.71
PTCH1-209ENST00000437951 EGR3Q06889 387 aa10.62□□□□□ -0.71
PTCH1-209ENST00000437951 LMAN2Q12907 356 aa10.62□□□□□ -0.71
PTCH1-209ENST00000437951 TSEN54Q7Z6J9 526 aaKnown RBP10.62□□□□□ -0.71
PTCH1-209ENST00000437951 ZNF595Q8IYB9 648 aa10.62□□□□□ -0.71
PTCH1-209ENST00000437951 OR2M3Q8NG83 312 aa10.62□□□□□ -0.71
PTCH1-209ENST00000437951 NEURL3Q96EH8 262 aa10.62□□□□□ -0.71
PTCH1-209ENST00000437951 SCMH1Q96GD3 660 aa10.62□□□□□ -0.71
PTCH1-209ENST00000437951 TOX3O15405 576 aaPredicted RBP10.62□□□□□ -0.71
PTCH1-209ENST00000437951 CD99P14209 185 aa10.62□□□□□ -0.71
PTCH1-209ENST00000437951 RPL17P18621 184 aaKnown RBP10.62□□□□□ -0.71
PTCH1-209ENST00000437951 PNLIPRP3Q17RR3 467 aa10.62□□□□□ -0.71
PTCH1-209ENST00000437951 MARCH8Q5T0T0 291 aa10.62□□□□□ -0.71
PTCH1-209ENST00000437951 RANBP10Q6VN20 620 aa10.62□□□□□ -0.71
PTCH1-209ENST00000437951 OR2AK2Q8NG84 335 aa10.62□□□□□ -0.71
PTCH1-209ENST00000437951 UBTD2Q8WUN7 234 aa10.62□□□□□ -0.71
PTCH1-209ENST00000437951 PRAMEF4O60810 478 aa10.61□□□□□ -0.71
PTCH1-209ENST00000437951 OR8G3PP0DMU2 310 aa10.61□□□□□ -0.71
PTCH1-209ENST00000437951 LIPAP38571 399 aa10.61□□□□□ -0.71
PTCH1-209ENST00000437951 EVX1P49640 407 aa10.61□□□□□ -0.71
PTCH1-209ENST00000437951 ERHP84090 104 aaKnown RBP10.61□□□□□ -0.71
PTCH1-209ENST00000437951 FOXK2Q01167 660 aa10.61□□□□□ -0.71
PTCH1-209ENST00000437951 SRYQ05066 204 aa10.61□□□□□ -0.71
PTCH1-209ENST00000437951 MFAP5Q13361 173 aa10.61□□□□□ -0.71
PTCH1-209ENST00000437951 PHLDA2Q53GA4 152 aa10.61□□□□□ -0.71
PTCH1-209ENST00000437951 C6orf132Q5T0Z8 1188 aa10.61□□□□□ -0.71
PTCH1-209ENST00000437951 ADPRHL1Q8NDY3 354 aa10.61□□□□□ -0.71
PTCH1-209ENST00000437951 THAP3Q8WTV1 239 aaPredicted RBP10.61□□□□□ -0.71
PTCH1-209ENST00000437951 TAAR6Q96RI8 345 aa10.61□□□□□ -0.71
PTCH1-209ENST00000437951 MBOAT4Q96T53 435 aa10.61□□□□□ -0.71
PTCH1-209ENST00000437951 SLC45A1Q9Y2W3 748 aa10.61□□□□□ -0.71
PTCH1-209ENST00000437951 PLRG1O43660 514 aaKnown RBP10.61□□□□□ -0.71
PTCH1-209ENST00000437951 POU3F1Q03052 451 aaPredicted RBP10.61□□□□□ -0.71
PTCH1-209ENST00000437951 ISG20Q96AZ6 181 aaKnown RBP10.61□□□□□ -0.71
PTCH1-209ENST00000437951 AKIP1Q9NQ31 210 aa10.61□□□□□ -0.71
PTCH1-209ENST00000437951 COCHO43405 550 aa10.61□□□□□ -0.71
PTCH1-209ENST00000437951 RPL24P83731 157 aaKnown RBP10.61□□□□□ -0.71
PTCH1-209ENST00000437951 SPRED3Q2MJR0 410 aa10.61□□□□□ -0.71
PTCH1-209ENST00000437951 DND1Q8IYX4 353 aaKnown RBP10.61□□□□□ -0.71
PTCH1-209ENST00000437951 LMO3Q8TAP4 145 aa10.61□□□□□ -0.71
PTCH1-209ENST00000437951 RXFP4Q8TDU9 374 aa10.61□□□□□ -0.71
PTCH1-209ENST00000437951 NECTIN4Q96NY8 510 aa10.61□□□□□ -0.71
PTCH1-209ENST00000437951 SPHK2Q9NRA0 654 aa10.61□□□□□ -0.71
PTCH1-209ENST00000437951 EIF1P41567 113 aaKnown RBP10.61□□□□□ -0.71
PTCH1-209ENST00000437951 GABREP78334 506 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms