RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 DTD2Q96FN9 168 aa6.93□□□□□ -1.3
SYNPO2-202ENST00000429713 MS4A10Q96PG2 267 aa6.93□□□□□ -1.3
SYNPO2-202ENST00000429713 TESQ9UGI8 421 aaKnown RBP6.93□□□□□ -1.3
SYNPO2-202ENST00000429713 COL6A6A6NMZ7 2263 aa6.93□□□□□ -1.3
SYNPO2-202ENST00000429713 CXorf51AA0A1B0GTR3 108 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 ASGR2P07307 311 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 NOVA1P51513 510 aaKnown RBP6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 HMGA2P52926 109 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 TAS2R38P59533 333 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 SRSF4Q08170 494 aaKnown RBP6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 LRRTM4Q86VH4 590 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 JAGN1Q8N5M9 183 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 MRPL24Q96A35 216 aaKnown RBP6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 ADAD1Q96M93 576 aaKnown RBP6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 TEPSINQ96N21 525 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 HHIPQ96QV1 700 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 ATOH8Q96SQ7 321 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 COA4Q9NYJ1 87 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 RAB22AQ9UL26 194 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 FRMPD3Q5JV73 1810 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 ERI3O43414 337 aaKnown RBP6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 ARSAP15289 507 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 TUBG1P23258 451 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 HOXA9P31269 272 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 IL10RAQ13651 578 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 ALKBH1Q13686 389 aaKnown RBP6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 MIDNQ504T8 468 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 TMEM128Q5BJH2 165 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 NADSYN1Q6IA69 706 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 KIAA0907Q7Z7F0 614 aaPredicted RBP6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 GLRX5Q86SX6 157 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 BAGE3Q86Y29 109 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 BAGE2Q86Y30 109 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 SDSLQ96GA7 329 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 SLC5A7Q9GZV3 580 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 RCC2Q9P258 522 aaKnown RBP6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 TBC1D3DA0A087WVF3 549 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 TBC1D3IA0A087WXS9 549 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 TBC1D3EA0A087X179 549 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 TBC1D3KA0A087X1G2 549 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 TBC1D3FA6NER0 549 aaPredicted RBP6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 TMEM235A6NFC5 223 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 TBC1D3LB9A6J9 549 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 FOXE1O00358 373 aaPredicted RBP6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 CLEC3BP05452 202 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 TBC1D3HP0C7X1 549 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 PNMTP11086 282 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 ERVFC1-1P60608 527 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 SLC35A1P78382 337 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 RPS26P11Q5JNZ5 115 aaPredicted RBP6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 FFAR4Q5NUL3 377 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 TPGS2Q68CL5 300 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 TBC1D3GQ6DHY5 549 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 TBC1D3CQ6IPX1 549 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 MRPL54Q6P161 138 aaKnown RBP6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 TBC1D3Q8IZP1 549 aaPredicted RBP6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 LRRC18Q8N456 261 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 ARHGEF39Q8N4T4 335 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 ZFP41Q8N8Y5 198 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 SYNPRQ8TBG9 265 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 ASB5Q8WWX0 329 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 OVCA2Q8WZ82 227 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 MYADMQ96S97 322 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 CMSS1Q9BQ75 279 aaKnown RBP6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 TMEM204Q9BSN7 226 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 G6PC3Q9BUM1 346 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 PUS1Q9Y606 427 aaKnown RBP eCLIP6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 MTMR11A4FU01 709 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 SYNGR4O95473 234 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 SEC11BP0C7V7 166 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 FPGSQ05932 587 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 RTL8BQ17RB0 113 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 VASNQ6EMK4 673 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 RGS7BPQ6MZT1 257 aaPredicted RBP6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 C19orf48Q6RUI8 117 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 TMPPEQ6ZT21 453 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 CALHM3Q86XJ0 350 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 TMEM183AQ8IXX5 376 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 CBARPQ8N350 705 aaPredicted RBP6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 NHLRC2Q8NBF2 726 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 TP53I13Q8NBR0 393 aaPredicted RBP6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 ADAMTS18Q8TE60 1221 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 ZNF845Q96IR2 970 aaPredicted RBP6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 UHRF2Q96PU4 802 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 ATF6BQ99941 703 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 PMCHL2Q9BQD1 86 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 PLXNB3Q9ULL4 1909 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 A0A1W2PPK0 400 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 CD3GP09693 182 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 RPS26P62854 115 aaKnown RBP6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 ENTPD8Q5MY95 495 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 ABHD12BQ7Z5M8 362 aaPredicted RBP6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 TEX37Q96LM6 180 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 GPR78Q96P69 363 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 OR51B4Q9Y5P0 310 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 NLRC5Q86WI3 1866 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 MDFIC2A0A1B0GVS7 189 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 FIGNL2A6NMB9 653 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 IFITM5A6NNB3 132 aa6.92□□□□□ -1.3
SYNPO2-202ENST00000429713 CD8AP01732 235 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms