RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 A0A1B0GW64 132 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 DAPL1A0PJW8 107 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 ARL5CA6NH57 179 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 IQCF5A8MTL0 148 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 CYB5BO43169 146 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 SMPD2O60906 423 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 OR2J2O76002 312 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 UMODP07911 640 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 OR4A8P0C604 315 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 PGA3P0DJD8 388 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 FOLR1P15328 257 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 ST6GAL1P15907 406 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 PNLIPP16233 465 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 PPICP45877 212 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 H3F3AP84243 136 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 CYCSP99999 105 aaKnown RBP8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 PSG6Q00889 435 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 UPP1Q16831 310 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 TANGO2Q6ICL3 276 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 MTSS1LQ765P7 747 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 TMED4Q7Z7H5 227 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 KMT5CQ86Y97 462 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 APCDD1Q8J025 514 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 TEX26Q8N6G2 289 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 PLPP5Q8NEB5 264 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 C17orf47Q8NEP4 570 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 OR5AK2Q8NH90 309 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 OR14L1PQ8NHC6 308 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 ARRDC2Q8TBH0 407 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 CD300LFQ8TDQ1 290 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 DCUN1D4Q92564 292 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 RAB39BQ96DA2 213 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 SGCZQ96LD1 299 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 CLUHP3Q96NS8 147 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 AQP10Q96PS8 301 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 SLC22A12Q96S37 553 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 MED10Q9BTT4 135 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 EBPLQ9BY08 206 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 OR2J1Q9GZK6 312 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 EGLN3Q9H6Z9 239 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 PADI1Q9ULC6 663 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 SCML2Q9UQR0 700 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 GAPDHSO14556 408 aaPredicted RBP8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 EIF1AYO14602 144 aaKnown RBP8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 IGHEP01854 428 aa8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 IFNA6P05013 189 aa8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 PCCBP05166 539 aa8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 CD1AP06126 327 aa8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 NBEAP1P0C6P0 100 aa8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 LYL1P12980 280 aa8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 EPORP19235 508 aa8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 CHATP28329 748 aa8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 CCKARP32238 428 aa8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 PTGER3P43115 390 aa8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 EIF1AXP47813 144 aaKnown RBP8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 DUSP5Q16690 384 aa8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 TRIM61Q5EBN2 209 aa8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 Q6ZRG5 221 aa8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 SYT9Q86SS6 491 aa8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 MRPL41Q8IXM3 137 aaKnown RBP8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 LYG1Q8N1E2 194 aa8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 TMEM86AQ8N2M4 240 aa8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 OR13C5Q8NGS8 318 aa8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 OR13C2Q8NGS9 318 aa8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 ADAD1Q96M93 576 aaKnown RBP8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 TCEAL2Q9H3H9 227 aaPredicted RBP8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 SLC32A1Q9H598 525 aa8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 AURKAIP1Q9NWT8 199 aaPredicted RBP8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 PCDHB8Q9UN66 801 aa8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 ICKQ9UPZ9 632 aa8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 YBX2Q9Y2T7 364 aaKnown RBP8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 PRG3Q9Y2Y8 225 aaPredicted RBP8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 CSAG2Q9Y5P2 127 aa8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 CASTOR2A6NHX0 329 aa8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 PPP5D1E7EU14 171 aa8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 GPANK1O95872 356 aa8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 IGLV3-25P01717 112 aa8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 RPN2P04844 631 aa8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 ERCC1P07992 297 aaPredicted RBP8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 GTF2F2P13984 249 aa8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 RAB6AP20340 208 aa8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 TM4SF4P48230 202 aa8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 PGFP49763 221 aa8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 RAB7AP51149 207 aa8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 HBA1P69905 142 aa8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 UBE2V1Q13404 147 aa8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 RNF151Q2KHN1 245 aa8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 FRG2Q64ET8 278 aa8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 ZNF705AQ6ZN79 300 aaPredicted RBP8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 C7orf61Q8IZ16 206 aa8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 C1orf87Q8N0U7 546 aa8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 C12orf76Q8N812 135 aaPredicted RBP8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 MITD1Q8WV92 249 aa8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 ZNF845Q96IR2 970 aaPredicted RBP8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 FRG2BQ96QU4 278 aa8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 TP53RKQ96S44 253 aa8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 RNF2Q99496 336 aa8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 SEPT5Q99719 369 aaPredicted RBP8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 VPS25Q9BRG1 176 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms