RNA–Protein interactions for RNA: ENST00000429294.3

HLA-F-219, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-219ENST00000429294 BAG5Q9UL15 447 aa11.09□□□□□ -0.63
HLA-F-219ENST00000429294 NDRG4Q9ULP0 352 aaKnown RBP11.09□□□□□ -0.63
HLA-F-219ENST00000429294 SH3GLB1Q9Y371 365 aa11.09□□□□□ -0.63
HLA-F-219ENST00000429294 MED31Q9Y3C7 131 aa11.09□□□□□ -0.63
HLA-F-219ENST00000429294 SURF4O15260 269 aa11.08□□□□□ -0.64
HLA-F-219ENST00000429294 OR5F1O95221 314 aa11.08□□□□□ -0.64
HLA-F-219ENST00000429294 CST2P09228 141 aa11.08□□□□□ -0.64
HLA-F-219ENST00000429294 TUBG1P23258 451 aa11.08□□□□□ -0.64
HLA-F-219ENST00000429294 ZFP36P26651 326 aaKnown RBP11.08□□□□□ -0.64
HLA-F-219ENST00000429294 IFNA8P32881 189 aa11.08□□□□□ -0.64
HLA-F-219ENST00000429294 IL13RA1P78552 427 aa11.08□□□□□ -0.64
HLA-F-219ENST00000429294 ZNF154Q13106 437 aa11.08□□□□□ -0.64
HLA-F-219ENST00000429294 TMEM155Q4W5P6 130 aa11.08□□□□□ -0.64
HLA-F-219ENST00000429294 ALG10Q5BKT4 473 aa11.08□□□□□ -0.64
HLA-F-219ENST00000429294 BEND6Q5SZJ8 279 aaPredicted RBP11.08□□□□□ -0.64
HLA-F-219ENST00000429294 ARMC4Q5T2S8 1044 aa11.08□□□□□ -0.64
HLA-F-219ENST00000429294 RFPL4BQ6ZWI9 263 aa11.08□□□□□ -0.64
HLA-F-219ENST00000429294 DEFB108BQ8NET1 73 aa11.08□□□□□ -0.64
HLA-F-219ENST00000429294 OR10A6Q8NH74 314 aa11.08□□□□□ -0.64
HLA-F-219ENST00000429294 HDAC2Q92769 488 aaKnown RBP11.08□□□□□ -0.64
HLA-F-219ENST00000429294 NABP1Q96AH0 204 aa11.08□□□□□ -0.64
HLA-F-219ENST00000429294 C4orf45Q96LM5 186 aa11.08□□□□□ -0.64
HLA-F-219ENST00000429294 DUX5Q96PT3 197 aa11.08□□□□□ -0.64
HLA-F-219ENST00000429294 PRSS27Q9BQR3 290 aa11.08□□□□□ -0.64
HLA-F-219ENST00000429294 MS4A7Q9GZW8 240 aaPredicted RBP11.08□□□□□ -0.64
HLA-F-219ENST00000429294 TXNIPQ9H3M7 391 aa11.08□□□□□ -0.64
HLA-F-219ENST00000429294 PATZ1Q9HBE1 687 aaKnown RBP11.08□□□□□ -0.64
HLA-F-219ENST00000429294 TUBG2Q9NRH3 451 aa11.08□□□□□ -0.64
HLA-F-219ENST00000429294 MAN2C1Q9NTJ4 1040 aa11.08□□□□□ -0.64
HLA-F-219ENST00000429294 TMEM106BQ9NUM4 274 aa11.08□□□□□ -0.64
HLA-F-219ENST00000429294 FAM53CQ9NYF3 392 aa11.08□□□□□ -0.64
HLA-F-219ENST00000429294 OR5V1Q9UGF6 321 aa11.08□□□□□ -0.64
HLA-F-219ENST00000429294 EGFL7Q9UHF1 273 aa11.08□□□□□ -0.64
HLA-F-219ENST00000429294 KLHL21Q9UJP4 597 aa11.08□□□□□ -0.64
HLA-F-219ENST00000429294 HTR3EA5X5Y0 456 aa11.07□□□□□ -0.64
HLA-F-219ENST00000429294 DNAJC9-AS1A6NH13 148 aa11.07□□□□□ -0.64
HLA-F-219ENST00000429294 POM121CA8CG34 1229 aa11.07□□□□□ -0.64
HLA-F-219ENST00000429294 C12orf71A8MTZ7 269 aa11.07□□□□□ -0.64
HLA-F-219ENST00000429294 ABHD16AO95870 558 aa11.07□□□□□ -0.64
HLA-F-219ENST00000429294 IFNA14P01570 189 aa11.07□□□□□ -0.64
HLA-F-219ENST00000429294 IGHV2-70P01814 119 aa11.07□□□□□ -0.64
HLA-F-219ENST00000429294 LAP3P28838 519 aa11.07□□□□□ -0.64
HLA-F-219ENST00000429294 MTNR1AP48039 350 aa11.07□□□□□ -0.64
HLA-F-219ENST00000429294 FMODQ06828 376 aa11.07□□□□□ -0.64
HLA-F-219ENST00000429294 CDK5R2Q13319 367 aa11.07□□□□□ -0.64
HLA-F-219ENST00000429294 TOP3AQ13472 1001 aaPredicted RBP11.07□□□□□ -0.64
HLA-F-219ENST00000429294 SELPLGQ14242 412 aa11.07□□□□□ -0.64
HLA-F-219ENST00000429294 LAPTM4AQ15012 233 aa11.07□□□□□ -0.64
HLA-F-219ENST00000429294 VMACQ2NL98 169 aa11.07□□□□□ -0.64
HLA-F-219ENST00000429294 ESCO2Q56NI9 601 aa11.07□□□□□ -0.64
HLA-F-219ENST00000429294 FAM205BPQ63HN1 556 aa11.07□□□□□ -0.64
HLA-F-219ENST00000429294 SLC25A47Q6Q0C1 308 aa11.07□□□□□ -0.64
HLA-F-219ENST00000429294 TREML4Q6UXN2 200 aa11.07□□□□□ -0.64
HLA-F-219ENST00000429294 TSPYL5Q86VY4 417 aaPredicted RBP11.07□□□□□ -0.64
HLA-F-219ENST00000429294 NKAIN4Q8IVV8 208 aa11.07□□□□□ -0.64
HLA-F-219ENST00000429294 MUC20Q8N307 709 aaPredicted RBP11.07□□□□□ -0.64
HLA-F-219ENST00000429294 NPEPL1Q8NDH3 523 aa11.07□□□□□ -0.64
HLA-F-219ENST00000429294 MOSPD2Q8NHP6 518 aa11.07□□□□□ -0.64
HLA-F-219ENST00000429294 PFN4Q8NHR9 129 aa11.07□□□□□ -0.64
HLA-F-219ENST00000429294 TSPEARQ8WU66 669 aa11.07□□□□□ -0.64
HLA-F-219ENST00000429294 TMEM255BQ8WV15 326 aa11.07□□□□□ -0.64
HLA-F-219ENST00000429294 LIPHQ8WWY8 451 aa11.07□□□□□ -0.64
HLA-F-219ENST00000429294 LRRC58Q96CX6 371 aa11.07□□□□□ -0.64
HLA-F-219ENST00000429294 SAMD8Q96LT4 415 aa11.07□□□□□ -0.64
HLA-F-219ENST00000429294 SH3GL1Q99961 368 aa11.07□□□□□ -0.64
HLA-F-219ENST00000429294 WNT5BQ9H1J7 359 aa11.07□□□□□ -0.64
HLA-F-219ENST00000429294 UNKLQ9H9P5 680 aaKnown RBP11.07□□□□□ -0.64
HLA-F-219ENST00000429294 NPHS2Q9NP85 383 aa11.07□□□□□ -0.64
HLA-F-219ENST00000429294 MMP26Q9NRE1 261 aa11.07□□□□□ -0.64
HLA-F-219ENST00000429294 ZNF69Q9UC07 566 aa11.07□□□□□ -0.64
HLA-F-219ENST00000429294 RIMS3Q9UJD0 308 aa11.07□□□□□ -0.64
HLA-F-219ENST00000429294 POLR3KQ9Y2Y1 108 aaPredicted RBP11.07□□□□□ -0.64
HLA-F-219ENST00000429294 UGT2A1Q9Y4X1 527 aa11.07□□□□□ -0.64
HLA-F-219ENST00000429294 TRRAPQ9Y4A5 3859 aa11.07□□□□□ -0.64
HLA-F-219ENST00000429294 A0A1W2PPL8 197 aa11.06□□□□□ -0.64
HLA-F-219ENST00000429294 A6NIZ1 184 aa11.06□□□□□ -0.64
HLA-F-219ENST00000429294 ICMTO60725 284 aa11.06□□□□□ -0.64
HLA-F-219ENST00000429294 NGFP01138 241 aa11.06□□□□□ -0.64
HLA-F-219ENST00000429294 RNASE1P07998 156 aaKnown RBP11.06□□□□□ -0.64
HLA-F-219ENST00000429294 THRBP10828 461 aa11.06□□□□□ -0.64
HLA-F-219ENST00000429294 ZNF12P17014 697 aa11.06□□□□□ -0.64
HLA-F-219ENST00000429294 SLC6A9P48067 706 aa11.06□□□□□ -0.64
HLA-F-219ENST00000429294 RAP1BP61224 184 aa11.06□□□□□ -0.64
HLA-F-219ENST00000429294 RPL27P61353 136 aaKnown RBP11.06□□□□□ -0.64
HLA-F-219ENST00000429294 BTG1P62324 171 aa11.06□□□□□ -0.64
HLA-F-219ENST00000429294 RAP1AP62834 184 aa11.06□□□□□ -0.64
HLA-F-219ENST00000429294 PSG7Q13046 419 aa11.06□□□□□ -0.64
HLA-F-219ENST00000429294 CYLC2Q14093 348 aaPredicted RBP11.06□□□□□ -0.64
HLA-F-219ENST00000429294 ZNF774Q6NX45 483 aa11.06□□□□□ -0.64
HLA-F-219ENST00000429294 CCDC80Q76M96 950 aa11.06□□□□□ -0.64
HLA-F-219ENST00000429294 SYT9Q86SS6 491 aa11.06□□□□□ -0.64
HLA-F-219ENST00000429294 LRRC28Q86X40 367 aaPredicted RBP11.06□□□□□ -0.64
HLA-F-219ENST00000429294 OR2Z1Q8NG97 314 aa11.06□□□□□ -0.64
HLA-F-219ENST00000429294 NMD3Q96D46 503 aaKnown RBP11.06□□□□□ -0.64
HLA-F-219ENST00000429294 COG8Q96MW5 612 aa11.06□□□□□ -0.64
HLA-F-219ENST00000429294 WACQ9BTA9 647 aa11.06□□□□□ -0.64
HLA-F-219ENST00000429294 C20orf141Q9NUB4 165 aa11.06□□□□□ -0.64
HLA-F-219ENST00000429294 TBCCD1Q9NVR7 557 aa11.06□□□□□ -0.64
HLA-F-219ENST00000429294 ZNF446Q9NWS9 450 aa11.06□□□□□ -0.64
HLA-F-219ENST00000429294 PPP1R3CQ9UQK1 317 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms