RNA–Protein interactions for RNA: ENST00000428026.6

PTPRU-204, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-204ENST00000428026 NPPBP16860 134 aa13.28□□□□□ -0.28
PTPRU-204ENST00000428026 TNFSF4P23510 183 aa13.28□□□□□ -0.28
PTPRU-204ENST00000428026 PHYHD1Q5SRE7 291 aa13.28□□□□□ -0.28
PTPRU-204ENST00000428026 FAM109BQ6ICB4 259 aaPredicted RBP13.28□□□□□ -0.28
PTPRU-204ENST00000428026 MFSD12Q6NUT3 480 aa13.28□□□□□ -0.28
PTPRU-204ENST00000428026 REEP6Q96HR9 211 aa13.28□□□□□ -0.28
PTPRU-204ENST00000428026 SPHK1Q9NYA1 384 aa13.28□□□□□ -0.28
PTPRU-204ENST00000428026 TAAR2Q9P1P5 351 aa13.28□□□□□ -0.28
PTPRU-204ENST00000428026 KIR2DS5A0A0G2JLQ3 304 aa13.27□□□□□ -0.28
PTPRU-204ENST00000428026 A0A0G2JNG1 304 aa13.27□□□□□ -0.28
PTPRU-204ENST00000428026 OR5H14A6NHG9 310 aa13.27□□□□□ -0.28
PTPRU-204ENST00000428026 KIR2DS3K7RE56 304 aa13.27□□□□□ -0.28
PTPRU-204ENST00000428026 OR2F2O95006 317 aa13.27□□□□□ -0.28
PTPRU-204ENST00000428026 PI3P19957 117 aa13.27□□□□□ -0.28
PTPRU-204ENST00000428026 F2RL1P55085 397 aa13.27□□□□□ -0.28
PTPRU-204ENST00000428026 OR2F1Q13607 317 aa13.27□□□□□ -0.28
PTPRU-204ENST00000428026 KIR2DS5Q14953 304 aa13.27□□□□□ -0.28
PTPRU-204ENST00000428026 ARHGAP11BQ3KRB8 267 aa13.27□□□□□ -0.28
PTPRU-204ENST00000428026 CD300LGQ6UXG3 332 aa13.27□□□□□ -0.28
PTPRU-204ENST00000428026 C15orf54Q8N8G6 183 aa13.27□□□□□ -0.28
PTPRU-204ENST00000428026 CNEP1R1Q8N9A8 125 aa13.27□□□□□ -0.28
PTPRU-204ENST00000428026 OR52B4Q8NGK2 314 aa13.27□□□□□ -0.28
PTPRU-204ENST00000428026 FAM103A1Q9BTL3 118 aaKnown RBP13.27□□□□□ -0.28
PTPRU-204ENST00000428026 TM7SF3Q9NS93 570 aa13.27□□□□□ -0.28
PTPRU-204ENST00000428026 GNG12Q9UBI6 72 aa13.27□□□□□ -0.28
PTPRU-204ENST00000428026 AK3Q9UIJ7 227 aa13.27□□□□□ -0.28
PTPRU-204ENST00000428026 YBX2Q9Y2T7 364 aaKnown RBP13.27□□□□□ -0.28
PTPRU-204ENST00000428026 ECM29Q5VYK3 1845 aa13.27□□□□□ -0.28
PTPRU-204ENST00000428026 ZNF354AO60765 605 aaPredicted RBP13.27□□□□□ -0.28
PTPRU-204ENST00000428026 ARRB2P32121 409 aa13.27□□□□□ -0.28
PTPRU-204ENST00000428026 THBS3P49746 956 aa13.27□□□□□ -0.28
PTPRU-204ENST00000428026 PGFP49763 221 aa13.27□□□□□ -0.28
PTPRU-204ENST00000428026 PCBD1P61457 104 aa13.27□□□□□ -0.28
PTPRU-204ENST00000428026 CMTM4Q8IZR5 234 aa13.27□□□□□ -0.28
PTPRU-204ENST00000428026 TVP23CQ96ET8 276 aa13.27□□□□□ -0.28
PTPRU-204ENST00000428026 ATF6BQ99941 703 aa13.27□□□□□ -0.28
PTPRU-204ENST00000428026 TMEM202A6NGA9 273 aa13.27□□□□□ -0.29
PTPRU-204ENST00000428026 PLPP1O14494 284 aa13.27□□□□□ -0.29
PTPRU-204ENST00000428026 EVX1P49640 407 aa13.27□□□□□ -0.29
PTPRU-204ENST00000428026 MRPL58Q14197 206 aaKnown RBP13.27□□□□□ -0.29
PTPRU-204ENST00000428026 LPCAT3Q6P1A2 487 aa13.27□□□□□ -0.29
PTPRU-204ENST00000428026 SLC48A1Q6P1K1 146 aa13.27□□□□□ -0.29
PTPRU-204ENST00000428026 CLEC9AQ6UXN8 241 aa13.27□□□□□ -0.29
PTPRU-204ENST00000428026 ACOT7LQ6ZUV0 252 aa13.27□□□□□ -0.29
PTPRU-204ENST00000428026 LGI3Q8N145 548 aa13.27□□□□□ -0.29
PTPRU-204ENST00000428026 OR4A16Q8NH70 328 aa13.27□□□□□ -0.29
PTPRU-204ENST00000428026 ORAI1Q96D31 301 aa13.27□□□□□ -0.29
PTPRU-204ENST00000428026 GABARAPL3Q9BY60 117 aa13.27□□□□□ -0.29
PTPRU-204ENST00000428026 SLC25A32Q9H2D1 315 aa13.27□□□□□ -0.29
PTPRU-204ENST00000428026 V9GYS6 101 aa13.27□□□□□ -0.29
PTPRU-204ENST00000428026 HNF1AP20823 631 aa13.27□□□□□ -0.29
PTPRU-204ENST00000428026 SRPXP78539 464 aa13.27□□□□□ -0.29
PTPRU-204ENST00000428026 FAM219BQ5XKK7 198 aa13.27□□□□□ -0.29
PTPRU-204ENST00000428026 SKA3Q8IX90 412 aa13.27□□□□□ -0.29
PTPRU-204ENST00000428026 FAM185AQ8N0U4 392 aa13.27□□□□□ -0.29
PTPRU-204ENST00000428026 OR51A2Q8NGJ7 313 aa13.27□□□□□ -0.29
PTPRU-204ENST00000428026 INTS12Q96CB8 462 aaKnown RBP13.27□□□□□ -0.29
PTPRU-204ENST00000428026 TCTN2Q96GX1 697 aa13.27□□□□□ -0.29
PTPRU-204ENST00000428026 VPS25Q9BRG1 176 aa13.27□□□□□ -0.29
PTPRU-204ENST00000428026 NECAP2Q9NVZ3 263 aa13.27□□□□□ -0.29
PTPRU-204ENST00000428026 COA3Q9Y2R0 106 aaPredicted RBP13.27□□□□□ -0.29
PTPRU-204ENST00000428026 ADAMTS7Q9UKP4 1686 aa13.27□□□□□ -0.29
PTPRU-204ENST00000428026 TMEM221A6NGB7 291 aa13.26□□□□□ -0.29
PTPRU-204ENST00000428026 C2CD4DB7Z1M9 353 aa13.26□□□□□ -0.29
PTPRU-204ENST00000428026 BCL6P41182 706 aa13.26□□□□□ -0.29
PTPRU-204ENST00000428026 IL34Q6ZMJ4 242 aa13.26□□□□□ -0.29
PTPRU-204ENST00000428026 GABRG1Q8N1C3 465 aa13.26□□□□□ -0.29
PTPRU-204ENST00000428026 KCNJ15Q99712 375 aa13.26□□□□□ -0.29
PTPRU-204ENST00000428026 MED9Q9NWA0 146 aa13.26□□□□□ -0.29
PTPRU-204ENST00000428026 ZAR1LA6NP61 321 aa13.26□□□□□ -0.29
PTPRU-204ENST00000428026 CTNSO60931 367 aa13.26□□□□□ -0.29
PTPRU-204ENST00000428026 MRPL33O75394 65 aaKnown RBP13.26□□□□□ -0.29
PTPRU-204ENST00000428026 CALCBP10092 127 aa13.26□□□□□ -0.29
PTPRU-204ENST00000428026 ACKR3P25106 362 aa13.26□□□□□ -0.29
PTPRU-204ENST00000428026 PHYHIPQ92561 330 aa13.26□□□□□ -0.29
PTPRU-204ENST00000428026 GAREM1Q9H706 876 aa13.26□□□□□ -0.29
PTPRU-204ENST00000428026 CDK5RAP2Q96SN8 1893 aa13.26□□□□□ -0.29
PTPRU-204ENST00000428026 EFSO43281 561 aa13.26□□□□□ -0.29
PTPRU-204ENST00000428026 KIR2DL3P43628 341 aa13.26□□□□□ -0.29
PTPRU-204ENST00000428026 GABREP78334 506 aa13.26□□□□□ -0.29
PTPRU-204ENST00000428026 MZT1Q08AG7 82 aa13.26□□□□□ -0.29
PTPRU-204ENST00000428026 SMIM15Q7Z3B0 74 aa13.26□□□□□ -0.29
PTPRU-204ENST00000428026 FAM26EQ8N5C1 309 aa13.26□□□□□ -0.29
PTPRU-204ENST00000428026 OR51H1Q8NH63 302 aa13.26□□□□□ -0.29
PTPRU-204ENST00000428026 WBP2Q969T9 261 aa13.26□□□□□ -0.29
PTPRU-204ENST00000428026 GABARAPL1Q9H0R8 117 aa13.26□□□□□ -0.29
PTPRU-204ENST00000428026 PCDHB10Q9UN67 800 aa13.26□□□□□ -0.29
PTPRU-204ENST00000428026 HCRTR1O43613 425 aa13.26□□□□□ -0.29
PTPRU-204ENST00000428026 NFYBP25208 207 aa13.26□□□□□ -0.29
PTPRU-204ENST00000428026 IHHQ14623 411 aa13.26□□□□□ -0.29
PTPRU-204ENST00000428026 LCN15Q6UWW0 184 aa13.26□□□□□ -0.29
PTPRU-204ENST00000428026 RIMKLAQ8IXN7 391 aa13.26□□□□□ -0.29
PTPRU-204ENST00000428026 ZNF595Q8IYB9 648 aa13.26□□□□□ -0.29
PTPRU-204ENST00000428026 COL4A5P29400 1685 aa13.26□□□□□ -0.29
PTPRU-204ENST00000428026 OR6C68A6NDL8 312 aa13.26□□□□□ -0.29
PTPRU-204ENST00000428026 ZFAND5O76080 213 aa13.26□□□□□ -0.29
PTPRU-204ENST00000428026 SDHBP21912 280 aa13.26□□□□□ -0.29
PTPRU-204ENST00000428026 PLAC9Q5JTB6 97 aa13.26□□□□□ -0.29
PTPRU-204ENST00000428026 PRSS36Q5K4E3 855 aa13.26□□□□□ -0.29
PTPRU-204ENST00000428026 Q7L0L9 218 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms