RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 SAMD4AQ9UPU9 718 aaKnown RBP15.72■□□□□ 0.11
PSPC1-202ENST00000427943 TRBV4-1A0A0J9YWV2 114 aa15.71■□□□□ 0.11
PSPC1-202ENST00000427943 A0A1W2PRQ8 180 aa15.71■□□□□ 0.11
PSPC1-202ENST00000427943 XKRYO14609 159 aa15.71■□□□□ 0.11
PSPC1-202ENST00000427943 WNT9BO14905 357 aa15.71■□□□□ 0.11
PSPC1-202ENST00000427943 PHF1O43189 567 aaPredicted RBP15.71■□□□□ 0.11
PSPC1-202ENST00000427943 CDC14BO60729 498 aa15.71■□□□□ 0.11
PSPC1-202ENST00000427943 GMNNO75496 209 aa15.71■□□□□ 0.11
PSPC1-202ENST00000427943 RHCEP18577 417 aa15.71■□□□□ 0.11
PSPC1-202ENST00000427943 HNF1AP20823 631 aa15.71■□□□□ 0.11
PSPC1-202ENST00000427943 LIMS1P48059 325 aa15.71■□□□□ 0.11
PSPC1-202ENST00000427943 KRR1Q13601 381 aaKnown RBP15.71■□□□□ 0.11
PSPC1-202ENST00000427943 DGCR6Q14129 220 aa15.71■□□□□ 0.11
PSPC1-202ENST00000427943 SEC23BQ15437 767 aa15.71■□□□□ 0.11
PSPC1-202ENST00000427943 TMEM255AQ5JRV8 349 aa15.71■□□□□ 0.11
PSPC1-202ENST00000427943 LINC01356Q8N9X3 169 aa15.71■□□□□ 0.11
PSPC1-202ENST00000427943 OR52J3Q8NH60 311 aa15.71■□□□□ 0.11
PSPC1-202ENST00000427943 SLC25A40Q8TBP6 338 aa15.71■□□□□ 0.11
PSPC1-202ENST00000427943 IPCEF1Q8WWN9 437 aaPredicted RBP15.71■□□□□ 0.11
PSPC1-202ENST00000427943 RSRC1Q96IZ7 334 aaKnown RBP15.71■□□□□ 0.11
PSPC1-202ENST00000427943 C7orf34Q96L11 122 aa15.71■□□□□ 0.11
PSPC1-202ENST00000427943 NDEL1Q9GZM8 345 aa15.71■□□□□ 0.11
PSPC1-202ENST00000427943 EIF3KQ9UBQ5 218 aaKnown RBP15.71■□□□□ 0.11
PSPC1-202ENST00000427943 SIGLEC7Q9Y286 467 aa15.71■□□□□ 0.11
PSPC1-202ENST00000427943 SVEP1Q4LDE5 3571 aa15.71■□□□□ 0.1
PSPC1-202ENST00000427943 IMPA2O14732 288 aa15.7■□□□□ 0.1
PSPC1-202ENST00000427943 TPD52L2O43399 206 aaKnown RBP15.7■□□□□ 0.1
PSPC1-202ENST00000427943 PPIHO43447 177 aaKnown RBP15.7■□□□□ 0.1
PSPC1-202ENST00000427943 RP2O75695 350 aa15.7■□□□□ 0.1
PSPC1-202ENST00000427943 NDUFB2O95178 105 aa15.7■□□□□ 0.1
PSPC1-202ENST00000427943 GCH1P30793 250 aa15.7■□□□□ 0.1
PSPC1-202ENST00000427943 OMPP47874 163 aa15.7■□□□□ 0.1
PSPC1-202ENST00000427943 PCBD1P61457 104 aa15.7■□□□□ 0.1
PSPC1-202ENST00000427943 GNGT1P63211 74 aa15.7■□□□□ 0.1
PSPC1-202ENST00000427943 ZNF718Q3SXZ3 478 aa15.7■□□□□ 0.1
PSPC1-202ENST00000427943 OTPQ5XKR4 325 aa15.7■□□□□ 0.1
PSPC1-202ENST00000427943 THSD4Q6ZMP0 1018 aa15.7■□□□□ 0.1
PSPC1-202ENST00000427943 PHC2Q8IXK0 858 aa15.7■□□□□ 0.1
PSPC1-202ENST00000427943 ALDH16A1Q8IZ83 802 aa15.7■□□□□ 0.1
PSPC1-202ENST00000427943 ABHD4Q8TB40 342 aa15.7■□□□□ 0.1
PSPC1-202ENST00000427943 OR2J1Q9GZK6 312 aa15.7■□□□□ 0.1
PSPC1-202ENST00000427943 RERGLQ9H628 205 aa15.7■□□□□ 0.1
PSPC1-202ENST00000427943 AURKCQ9UQB9 309 aa15.7■□□□□ 0.1
PSPC1-202ENST00000427943 TIMM10BQ9Y5J6 103 aa15.7■□□□□ 0.1
PSPC1-202ENST00000427943 PRSS37A4D1T9 235 aa15.69■□□□□ 0.1
PSPC1-202ENST00000427943 C12orf71A8MTZ7 269 aa15.69■□□□□ 0.1
PSPC1-202ENST00000427943 SOCS2O14508 198 aa15.69■□□□□ 0.1
PSPC1-202ENST00000427943 NGFP01138 241 aa15.69■□□□□ 0.1
PSPC1-202ENST00000427943 IGHV3-13P01766 116 aa15.69■□□□□ 0.1
PSPC1-202ENST00000427943 CTLA4P16410 223 aa15.69■□□□□ 0.1
PSPC1-202ENST00000427943 MSX2P35548 267 aaPredicted RBP15.69■□□□□ 0.1
PSPC1-202ENST00000427943 FXYD6P3P58550 94 aa15.69■□□□□ 0.1
PSPC1-202ENST00000427943 PPP1CBP62140 327 aa15.69■□□□□ 0.1
PSPC1-202ENST00000427943 TSTQ16762 297 aaKnown RBP15.69■□□□□ 0.1
PSPC1-202ENST00000427943 PCGF3Q3KNV8 242 aa15.69■□□□□ 0.1
PSPC1-202ENST00000427943 SPATA3Q8NHX4 192 aa15.69■□□□□ 0.1
PSPC1-202ENST00000427943 MARS2Q96GW9 593 aaKnown RBP15.69■□□□□ 0.1
PSPC1-202ENST00000427943 SYT4Q9H2B2 425 aa15.69■□□□□ 0.1
PSPC1-202ENST00000427943 LPAR2Q9HBW0 351 aa15.69■□□□□ 0.1
PSPC1-202ENST00000427943 ARL8BQ9NVJ2 186 aa15.69■□□□□ 0.1
PSPC1-202ENST00000427943 UNC119BA6NIH7 251 aa15.68■□□□□ 0.1
PSPC1-202ENST00000427943 FAM157AC9JC47 383 aa15.68■□□□□ 0.1
PSPC1-202ENST00000427943 DOK2O60496 412 aa15.68■□□□□ 0.1
PSPC1-202ENST00000427943 PTP4A3O75365 173 aa15.68■□□□□ 0.1
PSPC1-202ENST00000427943 MT-ND5P03915 603 aa15.68■□□□□ 0.1
PSPC1-202ENST00000427943 SDHAP31040 664 aa15.68■□□□□ 0.1
PSPC1-202ENST00000427943 ZNF81P51508 661 aa15.68■□□□□ 0.1
PSPC1-202ENST00000427943 MRPS11P82912 194 aaKnown RBP15.68■□□□□ 0.1
PSPC1-202ENST00000427943 SRSF2Q01130 221 aaKnown RBP15.68■□□□□ 0.1
PSPC1-202ENST00000427943 SPIBQ01892 262 aa15.68■□□□□ 0.1
PSPC1-202ENST00000427943 KRT72Q14CN4 511 aa15.68■□□□□ 0.1
PSPC1-202ENST00000427943 AVPI1Q5T686 147 aa15.68■□□□□ 0.1
PSPC1-202ENST00000427943 USP51Q70EK9 711 aa15.68■□□□□ 0.1
PSPC1-202ENST00000427943 PGAM4Q8N0Y7 254 aa15.68■□□□□ 0.1
PSPC1-202ENST00000427943 KLF14Q8TD94 323 aaPredicted RBP15.68■□□□□ 0.1
PSPC1-202ENST00000427943 C1orf159Q96HA4 380 aa15.68■□□□□ 0.1
PSPC1-202ENST00000427943 PYURFQ96I23 114 aa15.68■□□□□ 0.1
PSPC1-202ENST00000427943 DHRS1Q96LJ7 313 aa15.68■□□□□ 0.1
PSPC1-202ENST00000427943 GPA33Q99795 319 aa15.68■□□□□ 0.1
PSPC1-202ENST00000427943 RACGAP1Q9H0H5 632 aa15.68■□□□□ 0.1
PSPC1-202ENST00000427943 GORASP2Q9H8Y8 452 aa15.68■□□□□ 0.1
PSPC1-202ENST00000427943 KRCC1Q9NPI7 259 aaPredicted RBP15.68■□□□□ 0.1
PSPC1-202ENST00000427943 NRIP3Q9NQ35 241 aa15.68■□□□□ 0.1
PSPC1-202ENST00000427943 NKIRAS2Q9NYR9 191 aa15.68■□□□□ 0.1
PSPC1-202ENST00000427943 TREM2Q9NZC2 230 aa15.68■□□□□ 0.1
PSPC1-202ENST00000427943 MAGEL2Q9UJ55 1249 aa15.68■□□□□ 0.1
PSPC1-202ENST00000427943 IER3IP1Q9Y5U9 82 aa15.68■□□□□ 0.1
PSPC1-202ENST00000427943 CACNG2Q9Y698 323 aa15.68■□□□□ 0.1
PSPC1-202ENST00000427943 IGHV1-69-2A0A0G2JMI3 117 aa15.67■□□□□ 0.1
PSPC1-202ENST00000427943 ARPC2O15144 300 aa15.67■□□□□ 0.1
PSPC1-202ENST00000427943 SPRY3O43610 288 aa15.67■□□□□ 0.1
PSPC1-202ENST00000427943 SLC16A7O60669 478 aa15.67■□□□□ 0.1
PSPC1-202ENST00000427943 SEMG1P04279 462 aa15.67■□□□□ 0.1
PSPC1-202ENST00000427943 HSD17B1P14061 328 aa15.67■□□□□ 0.1
PSPC1-202ENST00000427943 HTR5AP47898 357 aa15.67■□□□□ 0.1
PSPC1-202ENST00000427943 MMP15P51511 669 aa15.67■□□□□ 0.1
PSPC1-202ENST00000427943 TMEM33P57088 247 aa15.67■□□□□ 0.1
PSPC1-202ENST00000427943 MVKQ03426 396 aa15.67■□□□□ 0.1
PSPC1-202ENST00000427943 MOGQ16653 247 aa15.67■□□□□ 0.1
PSPC1-202ENST00000427943 GPR139Q6DWJ6 353 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms