RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 OR5K4A6NMS3 321 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 KCNAB3O43448 404 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 SEMA4FO95754 770 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 HLA-AP01891 365 aaKnown RBP6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 IFI6P09912 130 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 ICAM2P13598 275 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 RPA2P15927 270 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 CTLA4P16410 223 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 CTHP32929 405 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 RIDAP52758 137 aaKnown RBP6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 CXADRP78310 365 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 RIPPLY1Q0D2K3 151 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 DHRS2Q13268 280 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 EMC4Q5J8M3 183 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 LY6G6FQ5SQ64 297 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 COL13A1Q5TAT6 717 aaPredicted RBP6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 ATPAF1Q5TC12 328 aaPredicted RBP6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 ASPHD2Q6ICH7 369 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 C3orf33Q6P1S2 294 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 RHOUQ7L0Q8 258 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 KCTD9Q7L273 389 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 IQCF2Q8IXL9 164 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 C7orf61Q8IZ16 206 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 TMEM185AQ8NFB2 350 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 ASB5Q8WWX0 329 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 TSLPQ969D9 159 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 FAM46BQ96A09 425 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 ZBTB8AQ96BR9 441 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 LRRC46Q96FV0 321 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 VRK1Q99986 396 aaPredicted RBP6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 MICU1Q9BPX6 476 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 WDR13Q9H1Z4 485 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 CENPMQ9NSP4 180 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 EPHA6Q9UF33 1036 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 GLS2Q9UI32 602 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 PLCL2Q9UPR0 1127 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 EMC9Q9Y3B6 208 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 PRSS37A4D1T9 235 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 FAM221BA6H8Z2 402 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 SOX1O00570 391 aaPredicted RBP6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 EIF1AYO14602 144 aaKnown RBP6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 AQP8O94778 261 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 ITGB2P05107 769 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 GUSBP08236 651 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 THEGLP0DJG4 465 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 NR0B1P51843 470 aaKnown RBP6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 AKR1C2P52895 323 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 ZNF117Q03924 483 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 AKR1C1Q04828 323 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 MPPED2Q15777 294 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 LINC00346Q8IVM7 164 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 SLC25A28Q96A46 364 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 CMBLQ96DG6 245 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 SLC6A7Q99884 636 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 ABHD6Q9BV23 337 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 OR11A1Q9GZK7 315 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 IFT46Q9NQC8 304 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 COA3Q9Y2R0 106 aaPredicted RBP6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 A0A1B0GW55 424 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 EEF1E1-BLOC1S5C9J1V9 151 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 PHYHO14832 338 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 NSA2O95478 260 aaKnown RBP6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 IL33O95760 270 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 DUX4L2P0CJ85 424 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 DUX4L3P0CJ86 424 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 DUX4L4P0CJ87 422 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 DUX4L5P0CJ88 424 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 DUX4L6P0CJ89 424 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 DUX4L7P0CJ90 424 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 VAMP1P23763 118 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 CD1CP29017 333 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 IL12BP29460 328 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 INSM1Q01101 510 aaPredicted RBP6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 ZP2Q05996 745 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 PMPCAQ10713 525 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 PRAMEF17Q5VTA0 474 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 KCTD18Q6PI47 426 aaPredicted RBP6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 TTLL10Q6ZVT0 673 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 MAMDC2Q7Z304 686 aaPredicted RBP6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 ZNF584Q8IVC4 421 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 ZSCAN1Q8NBB4 408 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 OR13C3Q8NGS6 347 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 RNF128Q8TEB7 428 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 PTPMT1Q8WUK0 201 aaPredicted RBP6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 LIPHQ8WWY8 451 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 TGM7Q96PF1 710 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 SLC25A21Q9BQT8 299 aaPredicted RBP6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 TBL1XR1Q9BZK7 514 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 MTIF3Q9H2K0 278 aaKnown RBP6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 MRPL22Q9NWU5 206 aaKnown RBP6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 DUX4Q9UBX2 424 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 GPN3Q9UHW5 284 aaPredicted RBP6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 GMEB2Q9UKD1 530 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 C13orf42A0A1B0GVH6 325 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 F5H0A9 414 aaPredicted RBP6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 H3BUI4 141 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 LMX1BO60663 402 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 DCNP07585 359 aaKnown RBP6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 GP1BBP13224 206 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms