RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 LIN54Q6MZP7 749 aa10.66□□□□□ -0.7
PTPRN-204ENST00000423636 SLC18B1Q6NT16 456 aa10.66□□□□□ -0.7
PTPRN-204ENST00000423636 WDR74Q6RFH5 385 aaPredicted RBP10.66□□□□□ -0.7
PTPRN-204ENST00000423636 YRDCQ86U90 279 aaKnown RBP10.66□□□□□ -0.7
PTPRN-204ENST00000423636 LRRTM1Q86UE6 522 aa10.66□□□□□ -0.7
PTPRN-204ENST00000423636 DUSP18Q8NEJ0 188 aa10.66□□□□□ -0.7
PTPRN-204ENST00000423636 OR4K17Q8NGC6 315 aa10.66□□□□□ -0.7
PTPRN-204ENST00000423636 OR13C9Q8NGT0 318 aa10.66□□□□□ -0.7
PTPRN-204ENST00000423636 C11orf40Q8WZ69 217 aa10.66□□□□□ -0.7
PTPRN-204ENST00000423636 PMM1Q92871 262 aa10.66□□□□□ -0.7
PTPRN-204ENST00000423636 ZNF837Q96EG3 531 aaPredicted RBP10.66□□□□□ -0.7
PTPRN-204ENST00000423636 MVB12AQ96EY5 273 aa10.66□□□□□ -0.7
PTPRN-204ENST00000423636 SLC19A3Q9BZV2 496 aa10.66□□□□□ -0.7
PTPRN-204ENST00000423636 UCK1Q9HA47 277 aa10.66□□□□□ -0.7
PTPRN-204ENST00000423636 CA10Q9NS85 328 aa10.66□□□□□ -0.7
PTPRN-204ENST00000423636 EIF3KQ9UBQ5 218 aaKnown RBP10.66□□□□□ -0.7
PTPRN-204ENST00000423636 YES1P07947 543 aa10.66□□□□□ -0.7
PTPRN-204ENST00000423636 SLC6A8P48029 635 aa10.66□□□□□ -0.7
PTPRN-204ENST00000423636 CCR9P51686 369 aa10.66□□□□□ -0.7
PTPRN-204ENST00000423636 SLC26A5P58743 744 aa10.66□□□□□ -0.7
PTPRN-204ENST00000423636 GLO1Q04760 184 aa10.66□□□□□ -0.7
PTPRN-204ENST00000423636 UBE2NLQ5JXB2 153 aa10.66□□□□□ -0.7
PTPRN-204ENST00000423636 SLC35D3Q5M8T2 416 aa10.66□□□□□ -0.7
PTPRN-204ENST00000423636 CFAP77Q6ZQR2 320 aa10.66□□□□□ -0.7
PTPRN-204ENST00000423636 CHMP1BQ7LBR1 199 aa10.66□□□□□ -0.7
PTPRN-204ENST00000423636 FGD2Q7Z6J4 655 aa10.66□□□□□ -0.7
PTPRN-204ENST00000423636 DCBLD2Q96PD2 775 aa10.66□□□□□ -0.7
PTPRN-204ENST00000423636 C20orf85Q9H1P6 137 aa10.66□□□□□ -0.7
PTPRN-204ENST00000423636 PCNX2A6NKB5 2137 aa10.65□□□□□ -0.7
PTPRN-204ENST00000423636 ROS1P08922 2347 aa10.65□□□□□ -0.7
PTPRN-204ENST00000423636 TRAV1-2A0A0B4J238 106 aa10.65□□□□□ -0.7
PTPRN-204ENST00000423636 A0A1B0GTQ1 180 aa10.65□□□□□ -0.7
PTPRN-204ENST00000423636 TMEM235A6NFC5 223 aa10.65□□□□□ -0.7
PTPRN-204ENST00000423636 KCNAB3O43448 404 aa10.65□□□□□ -0.7
PTPRN-204ENST00000423636 LAMTOR5O43504 91 aa10.65□□□□□ -0.7
PTPRN-204ENST00000423636 DHFRP00374 187 aa10.65□□□□□ -0.7
PTPRN-204ENST00000423636 ENPP1P22413 925 aa10.65□□□□□ -0.7
PTPRN-204ENST00000423636 RIDAP52758 137 aaKnown RBP10.65□□□□□ -0.7
PTPRN-204ENST00000423636 C2orf68Q2NKX9 166 aa10.65□□□□□ -0.7
PTPRN-204ENST00000423636 LAMTOR1Q6IAA8 161 aa10.65□□□□□ -0.7
PTPRN-204ENST00000423636 GVQW1Q8N7I0 195 aa10.65□□□□□ -0.7
PTPRN-204ENST00000423636 ZNF441Q8N8Z8 693 aa10.65□□□□□ -0.7
PTPRN-204ENST00000423636 OR11G2Q8NGC1 345 aa10.65□□□□□ -0.7
PTPRN-204ENST00000423636 FCAMRQ8WWV6 532 aa10.65□□□□□ -0.7
PTPRN-204ENST00000423636 KIAA1143Q96AT1 154 aaPredicted RBP10.65□□□□□ -0.7
PTPRN-204ENST00000423636 OR8B4Q96RC9 309 aa10.65□□□□□ -0.7
PTPRN-204ENST00000423636 SERINC1Q9NRX5 453 aa10.65□□□□□ -0.7
PTPRN-204ENST00000423636 CPAMD8Q8IZJ3 1885 aa10.65□□□□□ -0.7
PTPRN-204ENST00000423636 LOC107986453A0A1B0GWG9 222 aa10.65□□□□□ -0.7
PTPRN-204ENST00000423636 F5H5K5 113 aa10.65□□□□□ -0.7
PTPRN-204ENST00000423636 CD3DP04234 171 aa10.65□□□□□ -0.7
PTPRN-204ENST00000423636 H2BFMP0C1H6 154 aa10.65□□□□□ -0.7
PTPRN-204ENST00000423636 GTF2F2P13984 249 aa10.65□□□□□ -0.7
PTPRN-204ENST00000423636 ACY1Q03154 408 aa10.65□□□□□ -0.7
PTPRN-204ENST00000423636 C17orf67Q0P5P2 114 aa10.65□□□□□ -0.7
PTPRN-204ENST00000423636 OVCH1Q7RTY7 1134 aa10.65□□□□□ -0.7
PTPRN-204ENST00000423636 ZNF679Q8IYX0 411 aa10.65□□□□□ -0.7
PTPRN-204ENST00000423636 TMEM156Q8N614 296 aa10.65□□□□□ -0.7
PTPRN-204ENST00000423636 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.65□□□□□ -0.7
PTPRN-204ENST00000423636 OR2T35Q8NGX2 323 aa10.65□□□□□ -0.7
PTPRN-204ENST00000423636 ZNF519Q8TB69 540 aa10.65□□□□□ -0.7
PTPRN-204ENST00000423636 POC1BQ8TC44 478 aa10.65□□□□□ -0.7
PTPRN-204ENST00000423636 OR51E1Q8TCB6 317 aa10.65□□□□□ -0.7
PTPRN-204ENST00000423636 GPX7Q96SL4 187 aaPredicted RBP10.65□□□□□ -0.7
PTPRN-204ENST00000423636 DPCDQ9BVM2 203 aaPredicted RBP10.65□□□□□ -0.7
PTPRN-204ENST00000423636 C1QTNF6Q9BXI9 259 aa10.65□□□□□ -0.7
PTPRN-204ENST00000423636 OR2B2Q9GZK3 357 aa10.65□□□□□ -0.7
PTPRN-204ENST00000423636 SLC5A6Q9Y289 635 aa10.65□□□□□ -0.7
PTPRN-204ENST00000423636 NBASA2RRP1 2371 aa10.65□□□□□ -0.71
PTPRN-204ENST00000423636 DOCK10Q96BY6 2186 aa10.65□□□□□ -0.71
PTPRN-204ENST00000423636 PNLIPP16233 465 aa10.64□□□□□ -0.71
PTPRN-204ENST00000423636 OR52W1Q6IF63 320 aa10.64□□□□□ -0.71
PTPRN-204ENST00000423636 H1FNTQ75WM6 255 aaPredicted RBP10.64□□□□□ -0.71
PTPRN-204ENST00000423636 OR1J4Q8NGS1 313 aa10.64□□□□□ -0.71
PTPRN-204ENST00000423636 MAFIPQ8WZ33 124 aa10.64□□□□□ -0.71
PTPRN-204ENST00000423636 FAM3DQ96BQ1 224 aa10.64□□□□□ -0.71
PTPRN-204ENST00000423636 LIN37Q96GY3 246 aaPredicted RBP10.64□□□□□ -0.71
PTPRN-204ENST00000423636 PILRBQ9UKJ0 227 aa10.64□□□□□ -0.71
PTPRN-204ENST00000423636 CAMK2AQ9UQM7 478 aa10.64□□□□□ -0.71
PTPRN-204ENST00000423636 POM121CA8CG34 1229 aa10.64□□□□□ -0.71
PTPRN-204ENST00000423636 NPIPB7O75200 414 aa10.64□□□□□ -0.71
PTPRN-204ENST00000423636 TRAPPC6AO75865 159 aa10.64□□□□□ -0.71
PTPRN-204ENST00000423636 KRT33AO76009 404 aa10.64□□□□□ -0.71
PTPRN-204ENST00000423636 DXOO77932 396 aaKnown RBP10.64□□□□□ -0.71
PTPRN-204ENST00000423636 ZNF205O95201 554 aa10.64□□□□□ -0.71
PTPRN-204ENST00000423636 SLC6A9P48067 706 aa10.64□□□□□ -0.71
PTPRN-204ENST00000423636 SLC25A1P53007 311 aa10.64□□□□□ -0.71
PTPRN-204ENST00000423636 CLRN1P58418 232 aa10.64□□□□□ -0.71
PTPRN-204ENST00000423636 MAB21L1Q13394 359 aa10.64□□□□□ -0.71
PTPRN-204ENST00000423636 KLF9Q13886 244 aaPredicted RBP10.64□□□□□ -0.71
PTPRN-204ENST00000423636 LRRC37A5PQ49AS3 106 aa10.64□□□□□ -0.71
PTPRN-204ENST00000423636 OLFML2AQ68BL7 652 aa10.64□□□□□ -0.71
PTPRN-204ENST00000423636 PLCZ1Q86YW0 608 aa10.64□□□□□ -0.71
PTPRN-204ENST00000423636 WDSUB1Q8N9V3 476 aa10.64□□□□□ -0.71
PTPRN-204ENST00000423636 OR51S1Q8NGJ8 323 aa10.64□□□□□ -0.71
PTPRN-204ENST00000423636 ZNF431Q8TF32 576 aaPredicted RBP10.64□□□□□ -0.71
PTPRN-204ENST00000423636 ASB5Q8WWX0 329 aa10.64□□□□□ -0.71
PTPRN-204ENST00000423636 BANF2Q9H503 90 aa10.64□□□□□ -0.71
PTPRN-204ENST00000423636 NOX3Q9HBY0 568 aa10.64□□□□□ -0.71
PTPRN-204ENST00000423636 EXOSC3Q9NQT5 275 aaKnown RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms