RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 ELOVL3Q9HB03 270 aa14□□□□□ -0.17
CHCHD3-202ENST00000423635 MAN2C1Q9NTJ4 1040 aa14□□□□□ -0.17
CHCHD3-202ENST00000423635 SLC25A37Q9NYZ2 338 aa14□□□□□ -0.17
CHCHD3-202ENST00000423635 SLC13A4Q9UKG4 626 aa14□□□□□ -0.17
CHCHD3-202ENST00000423635 PPP1R3CQ9UQK1 317 aa14□□□□□ -0.17
CHCHD3-202ENST00000423635 SLC22A31A6NKX4 558 aa13.99□□□□□ -0.17
CHCHD3-202ENST00000423635 TIMM8AO60220 97 aaPredicted RBP13.99□□□□□ -0.17
CHCHD3-202ENST00000423635 THY1P04216 161 aa13.99□□□□□ -0.17
CHCHD3-202ENST00000423635 TUBG1P23258 451 aa13.99□□□□□ -0.17
CHCHD3-202ENST00000423635 ARHGDIAP52565 204 aa13.99□□□□□ -0.17
CHCHD3-202ENST00000423635 LRIF1Q5T3J3 769 aa13.99□□□□□ -0.17
CHCHD3-202ENST00000423635 FAM27BQ5VT28 67 aa13.99□□□□□ -0.17
CHCHD3-202ENST00000423635 SLC2A7Q6PXP3 512 aa13.99□□□□□ -0.17
CHCHD3-202ENST00000423635 BRD3OSQ6XYD6 125 aa13.99□□□□□ -0.17
CHCHD3-202ENST00000423635 Q6ZR03 302 aa13.99□□□□□ -0.17
CHCHD3-202ENST00000423635 ALDH16A1Q8IZ83 802 aa13.99□□□□□ -0.17
CHCHD3-202ENST00000423635 GOLGA6L1Q8N7Z2 621 aa13.99□□□□□ -0.17
CHCHD3-202ENST00000423635 ASB10Q8WXI3 467 aa13.99□□□□□ -0.17
CHCHD3-202ENST00000423635 NMD3Q96D46 503 aaKnown RBP13.99□□□□□ -0.17
CHCHD3-202ENST00000423635 SLC30A2Q9BRI3 323 aa13.99□□□□□ -0.17
CHCHD3-202ENST00000423635 ZNF426Q9BUY5 554 aa13.99□□□□□ -0.17
CHCHD3-202ENST00000423635 TMEM165Q9HC07 324 aa13.99□□□□□ -0.17
CHCHD3-202ENST00000423635 TUBG2Q9NRH3 451 aa13.99□□□□□ -0.17
CHCHD3-202ENST00000423635 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.99□□□□□ -0.17
CHCHD3-202ENST00000423635 RNF114Q9Y508 228 aa13.99□□□□□ -0.17
CHCHD3-202ENST00000423635 POMT1Q9Y6A1 747 aa13.99□□□□□ -0.17
CHCHD3-202ENST00000423635 NBEAL2Q6ZNJ1 2754 aa13.99□□□□□ -0.17
CHCHD3-202ENST00000423635 BLOC1S5-TXNDC5H3BN57 136 aa13.98□□□□□ -0.17
CHCHD3-202ENST00000423635 KITLGP21583 273 aa13.98□□□□□ -0.17
CHCHD3-202ENST00000423635 SLC6A2P23975 617 aa13.98□□□□□ -0.17
CHCHD3-202ENST00000423635 UGT2B15P54855 530 aa13.98□□□□□ -0.17
CHCHD3-202ENST00000423635 GNB2P62879 340 aa13.98□□□□□ -0.17
CHCHD3-202ENST00000423635 SCARB2Q14108 478 aa13.98□□□□□ -0.17
CHCHD3-202ENST00000423635 MPP2Q14168 576 aa13.98□□□□□ -0.17
CHCHD3-202ENST00000423635 ENTPD8Q5MY95 495 aa13.98□□□□□ -0.17
CHCHD3-202ENST00000423635 NXNQ6DKJ4 435 aa13.98□□□□□ -0.17
CHCHD3-202ENST00000423635 HDDC2Q7Z4H3 204 aa13.98□□□□□ -0.17
CHCHD3-202ENST00000423635 KLBQ86Z14 1044 aa13.98□□□□□ -0.17
CHCHD3-202ENST00000423635 ARMC8Q8IUR7 673 aa13.98□□□□□ -0.17
CHCHD3-202ENST00000423635 MSRB3Q8IXL7 192 aa13.98□□□□□ -0.17
CHCHD3-202ENST00000423635 OR2Z1Q8NG97 314 aa13.98□□□□□ -0.17
CHCHD3-202ENST00000423635 LINC01006Q8NI28 216 aa13.98□□□□□ -0.17
CHCHD3-202ENST00000423635 ITLN1Q8WWA0 313 aa13.98□□□□□ -0.17
CHCHD3-202ENST00000423635 FAM71F1Q96KD3 344 aaPredicted RBP13.98□□□□□ -0.17
CHCHD3-202ENST00000423635 OR2H1Q9GZK4 316 aa13.98□□□□□ -0.17
CHCHD3-202ENST00000423635 WNT5BQ9H1J7 359 aa13.98□□□□□ -0.17
CHCHD3-202ENST00000423635 MARCH7Q9H992 704 aa13.98□□□□□ -0.17
CHCHD3-202ENST00000423635 TNFRSF19Q9NS68 423 aa13.98□□□□□ -0.17
CHCHD3-202ENST00000423635 MIOXQ9UGB7 285 aa13.98□□□□□ -0.17
CHCHD3-202ENST00000423635 DOCK11Q5JSL3 2073 aa13.98□□□□□ -0.17
CHCHD3-202ENST00000423635 RYR3Q15413 4870 aa13.98□□□□□ -0.17
CHCHD3-202ENST00000423635 IGKV1D-43A0A0B4J1Z2 117 aa13.97□□□□□ -0.17
CHCHD3-202ENST00000423635 A0A1W2PRG6 482 aa13.97□□□□□ -0.17
CHCHD3-202ENST00000423635 IFNL4K9M1U5 179 aa13.97□□□□□ -0.17
CHCHD3-202ENST00000423635 SURF4O15260 269 aa13.97□□□□□ -0.17
CHCHD3-202ENST00000423635 SLC2A10O95528 541 aa13.97□□□□□ -0.17
CHCHD3-202ENST00000423635 FSTL3O95633 263 aa13.97□□□□□ -0.17
CHCHD3-202ENST00000423635 F13BP05160 661 aa13.97□□□□□ -0.17
CHCHD3-202ENST00000423635 PROK1P58294 105 aa13.97□□□□□ -0.17
CHCHD3-202ENST00000423635 ERVK-25P63136 954 aa13.97□□□□□ -0.17
CHCHD3-202ENST00000423635 NPTX1Q15818 432 aa13.97□□□□□ -0.17
CHCHD3-202ENST00000423635 SGCAQ16586 387 aa13.97□□□□□ -0.17
CHCHD3-202ENST00000423635 ARMC4Q5T2S8 1044 aa13.97□□□□□ -0.17
CHCHD3-202ENST00000423635 ARL9Q6T311 187 aa13.97□□□□□ -0.17
CHCHD3-202ENST00000423635 ZNF620Q6ZNG0 422 aa13.97□□□□□ -0.17
CHCHD3-202ENST00000423635 OR6T1Q8NGN1 323 aa13.97□□□□□ -0.17
CHCHD3-202ENST00000423635 PLEKHA8Q96JA3 519 aa13.97□□□□□ -0.17
CHCHD3-202ENST00000423635 MPP4Q96JB8 637 aa13.97□□□□□ -0.17
CHCHD3-202ENST00000423635 GCM1Q9NP62 436 aa13.97□□□□□ -0.17
CHCHD3-202ENST00000423635 TBCCD1Q9NVR7 557 aa13.97□□□□□ -0.17
CHCHD3-202ENST00000423635 THAP1Q9NVV9 213 aa13.97□□□□□ -0.17
CHCHD3-202ENST00000423635 SLAMF8Q9P0V8 285 aa13.97□□□□□ -0.17
CHCHD3-202ENST00000423635 STX18Q9P2W9 335 aaKnown RBP13.97□□□□□ -0.17
CHCHD3-202ENST00000423635 TIMM10BQ9Y5J6 103 aa13.97□□□□□ -0.17
CHCHD3-202ENST00000423635 CPSF4LA6NMK7 179 aaKnown RBP13.96□□□□□ -0.17
CHCHD3-202ENST00000423635 MCIDASD6RGH6 385 aa13.96□□□□□ -0.17
CHCHD3-202ENST00000423635 M0R3H8 397 aa13.96□□□□□ -0.17
CHCHD3-202ENST00000423635 UBDO15205 165 aa13.96□□□□□ -0.17
CHCHD3-202ENST00000423635 SNNO75324 88 aaPredicted RBP13.96□□□□□ -0.17
CHCHD3-202ENST00000423635 ERLIN1O75477 346 aa13.96□□□□□ -0.17
CHCHD3-202ENST00000423635 MELTFP08582 738 aa13.96□□□□□ -0.17
CHCHD3-202ENST00000423635 CST2P09228 141 aa13.96□□□□□ -0.17
CHCHD3-202ENST00000423635 UMPSP11172 480 aa13.96□□□□□ -0.17
CHCHD3-202ENST00000423635 RPS2P15880 293 aaKnown RBP13.96□□□□□ -0.17
CHCHD3-202ENST00000423635 GPX2P18283 190 aa13.96□□□□□ -0.17
CHCHD3-202ENST00000423635 PPIBP23284 216 aaKnown RBP13.96□□□□□ -0.17
CHCHD3-202ENST00000423635 DAP3P51398 398 aaKnown RBP13.96□□□□□ -0.17
CHCHD3-202ENST00000423635 RPL18Q07020 188 aaKnown RBP13.96□□□□□ -0.17
CHCHD3-202ENST00000423635 TAF11Q15544 211 aa13.96□□□□□ -0.17
CHCHD3-202ENST00000423635 DUSP7Q16829 419 aa13.96□□□□□ -0.17
CHCHD3-202ENST00000423635 SLC27A4Q6P1M0 643 aa13.96□□□□□ -0.17
CHCHD3-202ENST00000423635 SLC25A47Q6Q0C1 308 aa13.96□□□□□ -0.17
CHCHD3-202ENST00000423635 NANOGNBQ7Z5D8 188 aa13.96□□□□□ -0.17
CHCHD3-202ENST00000423635 FITM2Q8N6M3 262 aa13.96□□□□□ -0.17
CHCHD3-202ENST00000423635 SMYD1Q8NB12 490 aa13.96□□□□□ -0.17
CHCHD3-202ENST00000423635 VANGL1Q8TAA9 524 aaPredicted RBP13.96□□□□□ -0.17
CHCHD3-202ENST00000423635 ADAMTS16Q8TE57 1224 aa13.96□□□□□ -0.17
CHCHD3-202ENST00000423635 C10orf82Q8WW14 230 aa13.96□□□□□ -0.17
CHCHD3-202ENST00000423635 DYRK2Q92630 601 aa13.96□□□□□ -0.17
CHCHD3-202ENST00000423635 MEPEQ9NQ76 525 aaPredicted RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms