RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 GDI2P50395 445 aaKnown RBP9.44□□□□□ -0.9
USP49-204ENST00000423567 FXYD6P3P58550 94 aa9.44□□□□□ -0.9
USP49-204ENST00000423567 SCRN3Q0VDG4 424 aa9.44□□□□□ -0.9
USP49-204ENST00000423567 BNIP1Q12981 228 aa9.44□□□□□ -0.9
USP49-204ENST00000423567 MST1LQ2TV78 715 aa9.44□□□□□ -0.9
USP49-204ENST00000423567 RGS7BPQ6MZT1 257 aaPredicted RBP9.44□□□□□ -0.9
USP49-204ENST00000423567 LEG1Q6P5S2 330 aa9.44□□□□□ -0.9
USP49-204ENST00000423567 CLEC9AQ6UXN8 241 aa9.44□□□□□ -0.9
USP49-204ENST00000423567 ZNF620Q6ZNG0 422 aa9.44□□□□□ -0.9
USP49-204ENST00000423567 SYT9Q86SS6 491 aa9.44□□□□□ -0.9
USP49-204ENST00000423567 GLB1L2Q8IW92 636 aa9.44□□□□□ -0.9
USP49-204ENST00000423567 OR9Q2Q8NGE9 314 aa9.44□□□□□ -0.9
USP49-204ENST00000423567 OR4C15Q8NGM1 316 aa9.44□□□□□ -0.9
USP49-204ENST00000423567 AKR7LQ8NHP1 331 aa9.44□□□□□ -0.9
USP49-204ENST00000423567 SLC7A6OSQ96CW6 309 aaPredicted RBP9.44□□□□□ -0.9
USP49-204ENST00000423567 SAMD8Q96LT4 415 aa9.44□□□□□ -0.9
USP49-204ENST00000423567 ZNF416Q9BWM5 594 aa9.44□□□□□ -0.9
USP49-204ENST00000423567 REG4Q9BYZ8 158 aa9.44□□□□□ -0.9
USP49-204ENST00000423567 BCL2L14Q9BZR8 327 aa9.44□□□□□ -0.9
USP49-204ENST00000423567 OR2H1Q9GZK4 316 aa9.44□□□□□ -0.9
USP49-204ENST00000423567 MYOZ1Q9NP98 299 aaPredicted RBP9.44□□□□□ -0.9
USP49-204ENST00000423567 GPR160Q9UJ42 338 aa9.44□□□□□ -0.9
USP49-204ENST00000423567 POLR1DQ9Y2S0 133 aa9.44□□□□□ -0.9
USP49-204ENST00000423567 CDH10Q9Y6N8 788 aa9.44□□□□□ -0.9
USP49-204ENST00000423567 U3KQV3 271 aa9.44□□□□□ -0.9
USP49-204ENST00000423567 A0A1W2PPW3 197 aa9.43□□□□□ -0.9
USP49-204ENST00000423567 C5orf49A4QMS7 147 aa9.43□□□□□ -0.9
USP49-204ENST00000423567 M0R233 179 aa9.43□□□□□ -0.9
USP49-204ENST00000423567 SYNGR3O43761 229 aa9.43□□□□□ -0.9
USP49-204ENST00000423567 GPRIN2O60269 458 aa9.43□□□□□ -0.9
USP49-204ENST00000423567 E2F6O75461 281 aa9.43□□□□□ -0.9
USP49-204ENST00000423567 GASTP01350 101 aa9.43□□□□□ -0.9
USP49-204ENST00000423567 FAM157BP0CG42 384 aa9.43□□□□□ -0.9
USP49-204ENST00000423567 SLC25A16P16260 332 aa9.43□□□□□ -0.9
USP49-204ENST00000423567 PCSK6P29122 969 aa9.43□□□□□ -0.9
USP49-204ENST00000423567 CDKN2AP42771 156 aaKnown RBP9.43□□□□□ -0.9
USP49-204ENST00000423567 PSG4Q00888 419 aa9.43□□□□□ -0.9
USP49-204ENST00000423567 PPP1R8Q12972 351 aaKnown RBP9.43□□□□□ -0.9
USP49-204ENST00000423567 MOGQ16653 247 aa9.43□□□□□ -0.9
USP49-204ENST00000423567 MICAQ29983 383 aa9.43□□□□□ -0.9
USP49-204ENST00000423567 CLEC12AQ5QGZ9 265 aa9.43□□□□□ -0.9
USP49-204ENST00000423567 PGM2L1Q6PCE3 622 aa9.43□□□□□ -0.9
USP49-204ENST00000423567 ARL9Q6T311 187 aa9.43□□□□□ -0.9
USP49-204ENST00000423567 RASSF6Q6ZTQ3 369 aa9.43□□□□□ -0.9
USP49-204ENST00000423567 PTCHD4Q6ZW05 846 aa9.43□□□□□ -0.9
USP49-204ENST00000423567 VASH1Q7L8A9 365 aaPredicted RBP9.43□□□□□ -0.9
USP49-204ENST00000423567 ADGRG5Q8IZF4 528 aa9.43□□□□□ -0.9
USP49-204ENST00000423567 CIARTQ8N365 385 aaPredicted RBP9.43□□□□□ -0.9
USP49-204ENST00000423567 AQP11Q8NBQ7 271 aa9.43□□□□□ -0.9
USP49-204ENST00000423567 ICA1LQ8NDH6 482 aa9.43□□□□□ -0.9
USP49-204ENST00000423567 CPEB3Q8NE35 698 aaKnown RBP9.43□□□□□ -0.9
USP49-204ENST00000423567 OR4K13Q8NH42 304 aa9.43□□□□□ -0.9
USP49-204ENST00000423567 CANT1Q8WVQ1 401 aa9.43□□□□□ -0.9
USP49-204ENST00000423567 NEU4Q8WWR8 484 aaPredicted RBP9.43□□□□□ -0.9
USP49-204ENST00000423567 C11orf40Q8WZ69 217 aa9.43□□□□□ -0.9
USP49-204ENST00000423567 FAM168AQ92567 244 aa9.43□□□□□ -0.9
USP49-204ENST00000423567 ITPKCQ96DU7 683 aa9.43□□□□□ -0.9
USP49-204ENST00000423567 SNX18Q96RF0 628 aa9.43□□□□□ -0.9
USP49-204ENST00000423567 NMNAT3Q96T66 252 aa9.43□□□□□ -0.9
USP49-204ENST00000423567 NUAK2Q9H093 628 aa9.43□□□□□ -0.9
USP49-204ENST00000423567 OR51B6Q9H340 312 aa9.43□□□□□ -0.9
USP49-204ENST00000423567 MS4A5Q9H3V2 200 aa9.43□□□□□ -0.9
USP49-204ENST00000423567 GSX1Q9H4S2 264 aaPredicted RBP9.43□□□□□ -0.9
USP49-204ENST00000423567 EMC7Q9NPA0 242 aa9.43□□□□□ -0.9
USP49-204ENST00000423567 DUSP13Q9UII6 198 aa9.43□□□□□ -0.9
USP49-204ENST00000423567 NDRG4Q9ULP0 352 aaKnown RBP9.43□□□□□ -0.9
USP49-204ENST00000423567 COA3Q9Y2R0 106 aaPredicted RBP9.43□□□□□ -0.9
USP49-204ENST00000423567 PLCE1Q9P212 2302 aa9.43□□□□□ -0.9
USP49-204ENST00000423567 HEATR1Q9H583 2144 aaKnown RBP9.43□□□□□ -0.9
USP49-204ENST00000423567 TEP1Q99973 2627 aaKnown RBP9.42□□□□□ -0.9
USP49-204ENST00000423567 MED13LQ71F56 2210 aa9.42□□□□□ -0.9
USP49-204ENST00000423567 GSC2O15499 205 aa9.42□□□□□ -0.9
USP49-204ENST00000423567 ADRA2AP08913 450 aa9.42□□□□□ -0.9
USP49-204ENST00000423567 HIST1H1CP16403 213 aaKnown RBP9.42□□□□□ -0.9
USP49-204ENST00000423567 PDLIM4P50479 330 aa9.42□□□□□ -0.9
USP49-204ENST00000423567 UCP2P55851 309 aa9.42□□□□□ -0.9
USP49-204ENST00000423567 RIPPLY3P57055 190 aa9.42□□□□□ -0.9
USP49-204ENST00000423567 KLF3P57682 345 aaPredicted RBP9.42□□□□□ -0.9
USP49-204ENST00000423567 LSM6P62312 80 aaKnown RBP9.42□□□□□ -0.9
USP49-204ENST00000423567 GLO1Q04760 184 aa9.42□□□□□ -0.9
USP49-204ENST00000423567 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.42□□□□□ -0.9
USP49-204ENST00000423567 AQP6Q13520 282 aa9.42□□□□□ -0.9
USP49-204ENST00000423567 ENDOGQ14249 297 aaKnown RBP9.42□□□□□ -0.9
USP49-204ENST00000423567 CARTPTQ16568 116 aa9.42□□□□□ -0.9
USP49-204ENST00000423567 NKPD1Q17RQ9 610 aa9.42□□□□□ -0.9
USP49-204ENST00000423567 ZNF770Q6IQ21 691 aaPredicted RBP9.42□□□□□ -0.9
USP49-204ENST00000423567 ZNF774Q6NX45 483 aa9.42□□□□□ -0.9
USP49-204ENST00000423567 DNM1P46Q6ZS02 220 aa9.42□□□□□ -0.9
USP49-204ENST00000423567 C1orf174Q8IYL3 243 aa9.42□□□□□ -0.9
USP49-204ENST00000423567 PAQR4Q8N4S7 273 aaPredicted RBP9.42□□□□□ -0.9
USP49-204ENST00000423567 ZNF525Q8N782 197 aa9.42□□□□□ -0.9
USP49-204ENST00000423567 OR10H5Q8NGA6 315 aa9.42□□□□□ -0.9
USP49-204ENST00000423567 OR10G2Q8NGC3 310 aa9.42□□□□□ -0.9
USP49-204ENST00000423567 SYNPRQ8TBG9 265 aa9.42□□□□□ -0.9
USP49-204ENST00000423567 GIPC3Q8TF64 312 aa9.42□□□□□ -0.9
USP49-204ENST00000423567 SNX33Q8WV41 574 aa9.42□□□□□ -0.9
USP49-204ENST00000423567 POM121L2Q96KW2 1035 aa9.42□□□□□ -0.9
USP49-204ENST00000423567 FOXN4Q96NZ1 517 aa9.42□□□□□ -0.9
USP49-204ENST00000423567 SORCS2Q96PQ0 1159 aa9.42□□□□□ -0.9
USP49-204ENST00000423567 DOK1Q99704 481 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms