RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 A0A1B0GTH9 108 aa18.6■□□□□ 0.57
GPC1-202ENST00000420138 NPIPA2E9PIF3 369 aa18.6■□□□□ 0.57
GPC1-202ENST00000420138 NPIPA3F8WFD2 350 aa18.6■□□□□ 0.57
GPC1-202ENST00000420138 ZFPL1O95159 310 aa18.6■□□□□ 0.57
GPC1-202ENST00000420138 LAP3P28838 519 aa18.6■□□□□ 0.57
GPC1-202ENST00000420138 NTF4P34130 210 aa18.6■□□□□ 0.57
GPC1-202ENST00000420138 EIF2B1Q14232 305 aaKnown RBP18.6■□□□□ 0.57
GPC1-202ENST00000420138 RNFT1Q5M7Z0 435 aa18.6■□□□□ 0.57
GPC1-202ENST00000420138 PHYHD1Q5SRE7 291 aa18.6■□□□□ 0.57
GPC1-202ENST00000420138 CEACAM19Q7Z692 300 aa18.6■□□□□ 0.57
GPC1-202ENST00000420138 ROBO4Q8WZ75 1007 aa18.6■□□□□ 0.57
GPC1-202ENST00000420138 RGP1Q92546 391 aaPredicted RBP18.6■□□□□ 0.57
GPC1-202ENST00000420138 TMEM54Q969K7 222 aa18.6■□□□□ 0.57
GPC1-202ENST00000420138 ZNF845Q96IR2 970 aaPredicted RBP18.6■□□□□ 0.57
GPC1-202ENST00000420138 TTYH2Q9BSA4 534 aa18.6■□□□□ 0.57
GPC1-202ENST00000420138 KCNN2Q9H2S1 579 aa18.6■□□□□ 0.57
GPC1-202ENST00000420138 ABCB9Q9NP78 766 aa18.6■□□□□ 0.57
GPC1-202ENST00000420138 KCNMB2Q9Y691 235 aa18.6■□□□□ 0.57
GPC1-202ENST00000420138 V9GYH0 126 aa18.6■□□□□ 0.57
GPC1-202ENST00000420138 SPTBN4Q9H254 2564 aa18.6■□□□□ 0.57
GPC1-202ENST00000420138 SMIM30A4D0T7 59 aa18.59■□□□□ 0.57
GPC1-202ENST00000420138 CEACAM4O75871 244 aa18.59■□□□□ 0.57
GPC1-202ENST00000420138 AQP8O94778 261 aa18.59■□□□□ 0.57
GPC1-202ENST00000420138 PTTG1O95997 202 aa18.59■□□□□ 0.57
GPC1-202ENST00000420138 QDPRP09417 244 aa18.59■□□□□ 0.57
GPC1-202ENST00000420138 ZNF823P16415 610 aa18.59■□□□□ 0.57
GPC1-202ENST00000420138 ZNF133P52736 654 aaPredicted RBP18.59■□□□□ 0.57
GPC1-202ENST00000420138 CAV3P56539 151 aa18.59■□□□□ 0.57
GPC1-202ENST00000420138 DEFA1P59665 94 aa18.59■□□□□ 0.57
GPC1-202ENST00000420138 DEFA3P59666 94 aa18.59■□□□□ 0.57
GPC1-202ENST00000420138 PPIAP62937 165 aaKnown RBP18.59■□□□□ 0.57
GPC1-202ENST00000420138 MRPL28Q13084 256 aaKnown RBP18.59■□□□□ 0.57
GPC1-202ENST00000420138 DDI2Q5TDH0 399 aa18.59■□□□□ 0.57
GPC1-202ENST00000420138 NR2C2APQ86WQ0 139 aa18.59■□□□□ 0.57
GPC1-202ENST00000420138 ZNF679Q8IYX0 411 aa18.59■□□□□ 0.57
GPC1-202ENST00000420138 OR52N5Q8NH56 324 aa18.59■□□□□ 0.57
GPC1-202ENST00000420138 MIXL1Q9H2W2 232 aa18.59■□□□□ 0.57
GPC1-202ENST00000420138 ELOVL3Q9HB03 270 aa18.59■□□□□ 0.57
GPC1-202ENST00000420138 HSPB2A8KAH6 182 aa18.58■□□□□ 0.57
GPC1-202ENST00000420138 GPRIN2O60269 458 aa18.58■□□□□ 0.57
GPC1-202ENST00000420138 ITGB2P05107 769 aa18.58■□□□□ 0.57
GPC1-202ENST00000420138 ZNF708P17019 499 aa18.58■□□□□ 0.57
GPC1-202ENST00000420138 SELENOPP49908 381 aa18.58■□□□□ 0.57
GPC1-202ENST00000420138 ALKBH1Q13686 389 aaKnown RBP18.58■□□□□ 0.57
GPC1-202ENST00000420138 HSPB2Q16082 182 aa18.58■□□□□ 0.57
GPC1-202ENST00000420138 UNQ9370/PRO34162Q6UXP9 181 aa18.58■□□□□ 0.57
GPC1-202ENST00000420138 LINC00346Q8IVM7 164 aa18.58■□□□□ 0.57
GPC1-202ENST00000420138 HAVCR2Q8TDQ0 301 aa18.58■□□□□ 0.57
GPC1-202ENST00000420138 ACKR4Q9NPB9 350 aa18.58■□□□□ 0.57
GPC1-202ENST00000420138 GLTPQ9NZD2 209 aa18.58■□□□□ 0.57
GPC1-202ENST00000420138 CYB5R1Q9UHQ9 305 aa18.58■□□□□ 0.57
GPC1-202ENST00000420138 FOXD3Q9UJU5 478 aaPredicted RBP18.58■□□□□ 0.57
GPC1-202ENST00000420138 FLVCR1Q9Y5Y0 555 aa18.58■□□□□ 0.57
GPC1-202ENST00000420138 CDAP32320 146 aa18.58■□□□□ 0.56
GPC1-202ENST00000420138 MTNR1BP49286 362 aa18.58■□□□□ 0.56
GPC1-202ENST00000420138 ZMAT1Q5H9K5 638 aa18.58■□□□□ 0.56
GPC1-202ENST00000420138 FDX2Q6P4F2 183 aa18.58■□□□□ 0.56
GPC1-202ENST00000420138 DCXRQ7Z4W1 244 aa18.58■□□□□ 0.56
GPC1-202ENST00000420138 PRSS35Q8N3Z0 413 aa18.58■□□□□ 0.56
GPC1-202ENST00000420138 TEX19Q8NA77 164 aa18.58■□□□□ 0.56
GPC1-202ENST00000420138 TMEM178AQ8NBL3 297 aa18.58■□□□□ 0.56
GPC1-202ENST00000420138 OR2G2Q8NGZ5 317 aa18.58■□□□□ 0.56
GPC1-202ENST00000420138 CFAP47Q6ZTR5 3102 aa18.58■□□□□ 0.56
GPC1-202ENST00000420138 LOC400499M0QZD8 3231 aa18.57■□□□□ 0.56
GPC1-202ENST00000420138 OR4C45A6NMZ5 311 aa18.57■□□□□ 0.56
GPC1-202ENST00000420138 ID4P47928 161 aa18.57■□□□□ 0.56
GPC1-202ENST00000420138 KCTD18Q6PI47 426 aaPredicted RBP18.57■□□□□ 0.56
GPC1-202ENST00000420138 CORO6Q6QEF8 472 aa18.57■□□□□ 0.56
GPC1-202ENST00000420138 SPATC1Q76KD6 591 aa18.57■□□□□ 0.56
GPC1-202ENST00000420138 FAM109AQ8N4B1 249 aa18.57■□□□□ 0.56
GPC1-202ENST00000420138 RNF128Q8TEB7 428 aa18.57■□□□□ 0.56
GPC1-202ENST00000420138 CPNE4Q96A23 557 aaPredicted RBP18.57■□□□□ 0.56
GPC1-202ENST00000420138 ZNF281Q9Y2X9 895 aa18.57■□□□□ 0.56
GPC1-202ENST00000420138 LIPGQ9Y5X9 500 aa18.57■□□□□ 0.56
GPC1-202ENST00000420138 A0A1W2PPL8 197 aa18.56■□□□□ 0.56
GPC1-202ENST00000420138 NCR1O76036 304 aa18.56■□□□□ 0.56
GPC1-202ENST00000420138 PNPP00491 289 aa18.56■□□□□ 0.56
GPC1-202ENST00000420138 SERPINA3P01011 423 aa18.56■□□□□ 0.56
GPC1-202ENST00000420138 CFL1P23528 166 aaKnown RBP18.56■□□□□ 0.56
GPC1-202ENST00000420138 CSNK1A1P48729 337 aa18.56■□□□□ 0.56
GPC1-202ENST00000420138 KCNMB1Q16558 191 aa18.56■□□□□ 0.56
GPC1-202ENST00000420138 C10orf128Q5T292 105 aa18.56■□□□□ 0.56
GPC1-202ENST00000420138 OR8H2Q8N162 312 aa18.56■□□□□ 0.56
GPC1-202ENST00000420138 HTRA1Q92743 480 aa18.56■□□□□ 0.56
GPC1-202ENST00000420138 ZNF775Q96BV0 537 aaPredicted RBP18.56■□□□□ 0.56
GPC1-202ENST00000420138 FAM122AQ96E09 287 aa18.56■□□□□ 0.56
GPC1-202ENST00000420138 LRP12Q9Y561 859 aa18.56■□□□□ 0.56
GPC1-202ENST00000420138 CYTIPO60759 359 aa18.56■□□□□ 0.56
GPC1-202ENST00000420138 SRSF10O75494 262 aaKnown RBP18.56■□□□□ 0.56
GPC1-202ENST00000420138 KIR3DL2P43630 455 aa18.56■□□□□ 0.56
GPC1-202ENST00000420138 PPP3R1P63098 170 aa18.56■□□□□ 0.56
GPC1-202ENST00000420138 ZNF79Q15937 498 aa18.56■□□□□ 0.56
GPC1-202ENST00000420138 YIF1BQ5BJH7 314 aa18.56■□□□□ 0.56
GPC1-202ENST00000420138 C20orf196Q8IYI0 205 aa18.56■□□□□ 0.56
GPC1-202ENST00000420138 DIRAS2Q96HU8 199 aa18.56■□□□□ 0.56
GPC1-202ENST00000420138 C4orf45Q96LM5 186 aa18.56■□□□□ 0.56
GPC1-202ENST00000420138 OR14A2Q96R54 314 aa18.56■□□□□ 0.56
GPC1-202ENST00000420138 NEURL2Q9BR09 285 aa18.56■□□□□ 0.56
GPC1-202ENST00000420138 SRRQ9GZT4 340 aa18.56■□□□□ 0.56
GPC1-202ENST00000420138 ZDHHC11Q9H8X9 412 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms