RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 FAM107AO95990 144 aa14.1□□□□□ -0.15
LINC00404-201ENST00000418660 HPXP02790 462 aa14.1□□□□□ -0.15
LINC00404-201ENST00000418660 TACSTD2P09758 323 aa14.1□□□□□ -0.15
LINC00404-201ENST00000418660 LYNX1P0DP58 116 aa14.1□□□□□ -0.15
LINC00404-201ENST00000418660 NAT2P11245 290 aa14.1□□□□□ -0.15
LINC00404-201ENST00000418660 CTLA4P16410 223 aa14.1□□□□□ -0.15
LINC00404-201ENST00000418660 WNT5AP41221 380 aa14.1□□□□□ -0.15
LINC00404-201ENST00000418660 RPS6KA3P51812 740 aa14.1□□□□□ -0.15
LINC00404-201ENST00000418660 MOGQ16653 247 aa14.1□□□□□ -0.15
LINC00404-201ENST00000418660 ZNF774Q6NX45 483 aa14.1□□□□□ -0.15
LINC00404-201ENST00000418660 ADCK1Q86TW2 530 aa14.1□□□□□ -0.15
LINC00404-201ENST00000418660 C1orf174Q8IYL3 243 aa14.1□□□□□ -0.15
LINC00404-201ENST00000418660 ARHGAP24Q8N264 748 aa14.1□□□□□ -0.15
LINC00404-201ENST00000418660 ICA1LQ8NDH6 482 aa14.1□□□□□ -0.15
LINC00404-201ENST00000418660 RDH5Q92781 318 aa14.1□□□□□ -0.15
LINC00404-201ENST00000418660 SYT4Q9H2B2 425 aa14.1□□□□□ -0.15
LINC00404-201ENST00000418660 EMC7Q9NPA0 242 aa14.1□□□□□ -0.15
LINC00404-201ENST00000418660 HINT3Q9NQE9 182 aaKnown RBP14.1□□□□□ -0.15
LINC00404-201ENST00000418660 TMEM160Q9NX00 188 aa14.1□□□□□ -0.15
LINC00404-201ENST00000418660 VSX1Q9NZR4 365 aaPredicted RBP14.1□□□□□ -0.15
LINC00404-201ENST00000418660 ACTR3BQ9P1U1 418 aa14.1□□□□□ -0.15
LINC00404-201ENST00000418660 IL20RAQ9UHF4 553 aa14.1□□□□□ -0.15
LINC00404-201ENST00000418660 C17orf100A8MU93 164 aa14.09□□□□□ -0.15
LINC00404-201ENST00000418660 KIAA1324LA8MWY0 1029 aaPredicted RBP14.09□□□□□ -0.15
LINC00404-201ENST00000418660 SOCS2O14508 198 aa14.09□□□□□ -0.15
LINC00404-201ENST00000418660 OR10H3O60404 316 aa14.09□□□□□ -0.15
LINC00404-201ENST00000418660 SLC16A7O60669 478 aa14.09□□□□□ -0.15
LINC00404-201ENST00000418660 ICMTO60725 284 aa14.09□□□□□ -0.15
LINC00404-201ENST00000418660 LILRA1O75019 489 aa14.09□□□□□ -0.15
LINC00404-201ENST00000418660 KHDRBS3O75525 346 aaKnown RBP14.09□□□□□ -0.15
LINC00404-201ENST00000418660 IGHV3-13P01766 116 aa14.09□□□□□ -0.15
LINC00404-201ENST00000418660 ZNF16P17020 682 aaPredicted RBP14.09□□□□□ -0.15
LINC00404-201ENST00000418660 FPR3P25089 353 aa14.09□□□□□ -0.15
LINC00404-201ENST00000418660 RRM2P31350 389 aa14.09□□□□□ -0.15
LINC00404-201ENST00000418660 IFNGR2P38484 337 aa14.09□□□□□ -0.15
LINC00404-201ENST00000418660 CHN2P52757 468 aa14.09□□□□□ -0.15
LINC00404-201ENST00000418660 MRPS11P82912 194 aaKnown RBP14.09□□□□□ -0.15
LINC00404-201ENST00000418660 SCRN3Q0VDG4 424 aa14.09□□□□□ -0.15
LINC00404-201ENST00000418660 RFX4Q33E94 735 aa14.09□□□□□ -0.15
LINC00404-201ENST00000418660 ALKBH6Q3KRA9 238 aa14.09□□□□□ -0.15
LINC00404-201ENST00000418660 ZNF718Q3SXZ3 478 aa14.09□□□□□ -0.15
LINC00404-201ENST00000418660 ZDHHC21Q8IVQ6 265 aa14.09□□□□□ -0.15
LINC00404-201ENST00000418660 GLB1L2Q8IW92 636 aa14.09□□□□□ -0.15
LINC00404-201ENST00000418660 ZNF101Q8IZC7 436 aa14.09□□□□□ -0.15
LINC00404-201ENST00000418660 CCDC197Q8NCU1 140 aa14.09□□□□□ -0.15
LINC00404-201ENST00000418660 SNX33Q8WV41 574 aa14.09□□□□□ -0.15
LINC00404-201ENST00000418660 MSI2Q96DH6 328 aaKnown RBP14.09□□□□□ -0.15
LINC00404-201ENST00000418660 NDRG4Q9ULP0 352 aaKnown RBP14.09□□□□□ -0.15
LINC00404-201ENST00000418660 TMCC3Q9ULS5 477 aa14.09□□□□□ -0.15
LINC00404-201ENST00000418660 LOC100289279A0A1B0GTE1 492 aa14.08□□□□□ -0.16
LINC00404-201ENST00000418660 LRP5LA4QPB2 252 aa14.08□□□□□ -0.16
LINC00404-201ENST00000418660 IMPA2O14732 288 aa14.08□□□□□ -0.16
LINC00404-201ENST00000418660 LMX1BO60663 402 aa14.08□□□□□ -0.16
LINC00404-201ENST00000418660 COX5BP10606 129 aa14.08□□□□□ -0.16
LINC00404-201ENST00000418660 ACHEP22303 614 aa14.08□□□□□ -0.16
LINC00404-201ENST00000418660 COL8A2P25067 703 aa14.08□□□□□ -0.16
LINC00404-201ENST00000418660 GCH1P30793 250 aa14.08□□□□□ -0.16
LINC00404-201ENST00000418660 SLC6A6P31641 620 aa14.08□□□□□ -0.16
LINC00404-201ENST00000418660 CDKN2AP42771 156 aaKnown RBP14.08□□□□□ -0.16
LINC00404-201ENST00000418660 LSM6P62312 80 aaKnown RBP14.08□□□□□ -0.16
LINC00404-201ENST00000418660 PCGF3Q3KNV8 242 aa14.08□□□□□ -0.16
LINC00404-201ENST00000418660 CHRFAM7AQ494W8 412 aa14.08□□□□□ -0.16
LINC00404-201ENST00000418660 MTX3Q5HYI7 312 aa14.08□□□□□ -0.16
LINC00404-201ENST00000418660 FAM166AQ6J272 317 aa14.08□□□□□ -0.16
LINC00404-201ENST00000418660 C1orf94Q6P1W5 598 aa14.08□□□□□ -0.16
LINC00404-201ENST00000418660 TMEM154Q6P9G4 183 aa14.08□□□□□ -0.16
LINC00404-201ENST00000418660 CYP2R1Q6VVX0 501 aa14.08□□□□□ -0.16
LINC00404-201ENST00000418660 PTCHD4Q6ZW05 846 aa14.08□□□□□ -0.16
LINC00404-201ENST00000418660 FANK1Q8TC84 345 aa14.08□□□□□ -0.16
LINC00404-201ENST00000418660 HPS1Q92902 700 aa14.08□□□□□ -0.16
LINC00404-201ENST00000418660 MARS2Q96GW9 593 aaKnown RBP14.08□□□□□ -0.16
LINC00404-201ENST00000418660 ERMAPQ96PL5 475 aaPredicted RBP14.08□□□□□ -0.16
LINC00404-201ENST00000418660 NUAK2Q9H093 628 aa14.08□□□□□ -0.16
LINC00404-201ENST00000418660 OR52D1Q9H346 318 aa14.08□□□□□ -0.16
LINC00404-201ENST00000418660 MUC13Q9H3R2 512 aa14.08□□□□□ -0.16
LINC00404-201ENST00000418660 RERGLQ9H628 205 aa14.08□□□□□ -0.16
LINC00404-201ENST00000418660 CHODLQ9H9P2 273 aa14.08□□□□□ -0.16
LINC00404-201ENST00000418660 ELOVL3Q9HB03 270 aa14.08□□□□□ -0.16
LINC00404-201ENST00000418660 NKIRAS2Q9NYR9 191 aa14.08□□□□□ -0.16
LINC00404-201ENST00000418660 CDC42EP3Q9UKI2 254 aa14.08□□□□□ -0.16
LINC00404-201ENST00000418660 COA3Q9Y2R0 106 aaPredicted RBP14.08□□□□□ -0.16
LINC00404-201ENST00000418660 YLPM1P49750 1951 aaKnown RBP14.08□□□□□ -0.16
LINC00404-201ENST00000418660 ABCA2Q9BZC7 2435 aa14.07□□□□□ -0.16
LINC00404-201ENST00000418660 CHD3Q12873 2000 aaKnown RBP14.07□□□□□ -0.16
LINC00404-201ENST00000418660 ARPC3O15145 178 aa14.07□□□□□ -0.16
LINC00404-201ENST00000418660 KRT36O76013 467 aa14.07□□□□□ -0.16
LINC00404-201ENST00000418660 NCR1O76036 304 aa14.07□□□□□ -0.16
LINC00404-201ENST00000418660 PPP1R3DO95685 299 aa14.07□□□□□ -0.16
LINC00404-201ENST00000418660 MT-ND5P03915 603 aa14.07□□□□□ -0.16
LINC00404-201ENST00000418660 ATP6V1B2P21281 511 aa14.07□□□□□ -0.16
LINC00404-201ENST00000418660 CALB2P22676 271 aa14.07□□□□□ -0.16
LINC00404-201ENST00000418660 MAGEB1P43366 347 aa14.07□□□□□ -0.16
LINC00404-201ENST00000418660 GSSP48637 474 aa14.07□□□□□ -0.16
LINC00404-201ENST00000418660 HMGA2P52926 109 aa14.07□□□□□ -0.16
LINC00404-201ENST00000418660 TMEM33P57088 247 aa14.07□□□□□ -0.16
LINC00404-201ENST00000418660 PPP1CBP62140 327 aa14.07□□□□□ -0.16
LINC00404-201ENST00000418660 MBNL2Q5VZF2 373 aaKnown RBP14.07□□□□□ -0.16
LINC00404-201ENST00000418660 ARL9Q6T311 187 aa14.07□□□□□ -0.16
LINC00404-201ENST00000418660 RFPL4BQ6ZWI9 263 aa14.07□□□□□ -0.16
LINC00404-201ENST00000418660 ABHD4Q8TB40 342 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms