RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 ROM1Q03395 351 aa18.37■□□□□ 0.53
CASC3-203ENST00000418132 EIF2B1Q14232 305 aaKnown RBP18.37■□□□□ 0.53
CASC3-203ENST00000418132 ADGRE4PQ86SQ3 457 aa18.37■□□□□ 0.53
CASC3-203ENST00000418132 HAVCR2Q8TDQ0 301 aa18.37■□□□□ 0.53
CASC3-203ENST00000418132 TMEM203Q969S6 136 aa18.37■□□□□ 0.53
CASC3-203ENST00000418132 RNF166Q96A37 237 aaPredicted RBP18.37■□□□□ 0.53
CASC3-203ENST00000418132 TRMT61AQ96FX7 289 aaKnown RBP18.37■□□□□ 0.53
CASC3-203ENST00000418132 CDADC1Q9BWV3 514 aa18.37■□□□□ 0.53
CASC3-203ENST00000418132 POLE4Q9NR33 117 aa18.37■□□□□ 0.53
CASC3-203ENST00000418132 CYB5R1Q9UHQ9 305 aa18.37■□□□□ 0.53
CASC3-203ENST00000418132 HSPB2A8KAH6 182 aa18.37■□□□□ 0.53
CASC3-203ENST00000418132 C1QTNF9BB2RNN3 333 aa18.37■□□□□ 0.53
CASC3-203ENST00000418132 UPK3AO75631 287 aa18.37■□□□□ 0.53
CASC3-203ENST00000418132 C1QTNF9P0C862 333 aa18.37■□□□□ 0.53
CASC3-203ENST00000418132 TGM4P49221 684 aa18.37■□□□□ 0.53
CASC3-203ENST00000418132 CXADRP78310 365 aa18.37■□□□□ 0.53
CASC3-203ENST00000418132 CDK5R1Q15078 307 aa18.37■□□□□ 0.53
CASC3-203ENST00000418132 HSPB2Q16082 182 aa18.37■□□□□ 0.53
CASC3-203ENST00000418132 RIPPLY2Q5TAB7 128 aa18.37■□□□□ 0.53
CASC3-203ENST00000418132 KCTD18Q6PI47 426 aaPredicted RBP18.37■□□□□ 0.53
CASC3-203ENST00000418132 Q6ZNX1 250 aa18.37■□□□□ 0.53
CASC3-203ENST00000418132 FAM220AQ7Z4H9 259 aa18.37■□□□□ 0.53
CASC3-203ENST00000418132 TUSC5Q8IXB3 177 aa18.37■□□□□ 0.53
CASC3-203ENST00000418132 ST7LQ8TDW4 575 aa18.37■□□□□ 0.53
CASC3-203ENST00000418132 TM9SF2Q99805 663 aa18.37■□□□□ 0.53
CASC3-203ENST00000418132 SLCO1C1Q9NYB5 712 aa18.37■□□□□ 0.53
CASC3-203ENST00000418132 CCDC59Q9P031 241 aaKnown RBP18.37■□□□□ 0.53
CASC3-203ENST00000418132 IKZF2Q9UKS7 526 aa18.37■□□□□ 0.53
CASC3-203ENST00000418132 SSR3Q9UNL2 185 aa18.37■□□□□ 0.53
CASC3-203ENST00000418132 NOSIPQ9Y314 301 aaKnown RBP18.37■□□□□ 0.53
CASC3-203ENST00000418132 MAGEB3O15480 346 aa18.36■□□□□ 0.53
CASC3-203ENST00000418132 TMCC2O75069 709 aa18.36■□□□□ 0.53
CASC3-203ENST00000418132 CRYABP02511 175 aaKnown RBP18.36■□□□□ 0.53
CASC3-203ENST00000418132 MRPL28Q13084 256 aaKnown RBP18.36■□□□□ 0.53
CASC3-203ENST00000418132 LIPNQ5VXI9 398 aa18.36■□□□□ 0.53
CASC3-203ENST00000418132 RPL22L1Q6P5R6 122 aaKnown RBP18.36■□□□□ 0.53
CASC3-203ENST00000418132 ZNF679Q8IYX0 411 aa18.36■□□□□ 0.53
CASC3-203ENST00000418132 YIPF7Q8N8F6 280 aa18.36■□□□□ 0.53
CASC3-203ENST00000418132 OR52N5Q8NH56 324 aa18.36■□□□□ 0.53
CASC3-203ENST00000418132 RPS4Y2Q8TD47 263 aa18.36■□□□□ 0.53
CASC3-203ENST00000418132 NXF2Q9GZY0 626 aaKnown RBP18.36■□□□□ 0.53
CASC3-203ENST00000418132 EXOSC4Q9NPD3 245 aaKnown RBP18.36■□□□□ 0.53
CASC3-203ENST00000418132 PARPBPQ9NWS1 579 aa18.36■□□□□ 0.53
CASC3-203ENST00000418132 SLC22A20A6NK97 555 aa18.35■□□□□ 0.53
CASC3-203ENST00000418132 MRPL33O75394 65 aaKnown RBP18.35■□□□□ 0.53
CASC3-203ENST00000418132 TGM6O95932 706 aa18.35■□□□□ 0.53
CASC3-203ENST00000418132 CD1AP06126 327 aa18.35■□□□□ 0.53
CASC3-203ENST00000418132 YES1P07947 543 aa18.35■□□□□ 0.53
CASC3-203ENST00000418132 ZNF12P17014 697 aa18.35■□□□□ 0.53
CASC3-203ENST00000418132 ARL9Q6T311 187 aa18.35■□□□□ 0.53
CASC3-203ENST00000418132 DCXRQ7Z4W1 244 aa18.35■□□□□ 0.53
CASC3-203ENST00000418132 LINC00346Q8IVM7 164 aa18.35■□□□□ 0.53
CASC3-203ENST00000418132 PGLYRP3Q96LB9 341 aa18.35■□□□□ 0.53
CASC3-203ENST00000418132 COQ7Q99807 217 aa18.35■□□□□ 0.53
CASC3-203ENST00000418132 TMED9Q9BVK6 235 aa18.35■□□□□ 0.53
CASC3-203ENST00000418132 EMC7Q9NPA0 242 aa18.35■□□□□ 0.53
CASC3-203ENST00000418132 A3GALT2U3KPV4 340 aa18.35■□□□□ 0.53
CASC3-203ENST00000418132 PHF3Q92576 2039 aaKnown RBP18.35■□□□□ 0.53
CASC3-203ENST00000418132 CACNA1CQ13936 2221 aa18.35■□□□□ 0.53
CASC3-203ENST00000418132 A0A1B0GTH9 108 aa18.35■□□□□ 0.53
CASC3-203ENST00000418132 HLA-DPB1P04440 258 aa18.35■□□□□ 0.53
CASC3-203ENST00000418132 FCGR2AP12318 317 aa18.35■□□□□ 0.53
CASC3-203ENST00000418132 GALP22466 123 aa18.35■□□□□ 0.53
CASC3-203ENST00000418132 PSMB10P40306 273 aa18.35■□□□□ 0.53
CASC3-203ENST00000418132 ZNF84P51523 738 aa18.35■□□□□ 0.53
CASC3-203ENST00000418132 FABP5Q01469 135 aa18.35■□□□□ 0.53
CASC3-203ENST00000418132 LRRN1Q6UXK5 716 aa18.35■□□□□ 0.53
CASC3-203ENST00000418132 GPR137CQ8N3F9 429 aa18.35■□□□□ 0.53
CASC3-203ENST00000418132 SMIM19Q96E16 107 aa18.35■□□□□ 0.53
CASC3-203ENST00000418132 RBM24Q9BX46 236 aaKnown RBP18.35■□□□□ 0.53
CASC3-203ENST00000418132 MROQ9BYG7 248 aa18.35■□□□□ 0.53
CASC3-203ENST00000418132 C6orf62Q9GZU0 229 aaPredicted RBP18.35■□□□□ 0.53
CASC3-203ENST00000418132 GP6Q9HCN6 339 aa18.35■□□□□ 0.53
CASC3-203ENST00000418132 B3GAT2Q9NPZ5 323 aa18.35■□□□□ 0.53
CASC3-203ENST00000418132 TXNL4BQ9NX01 149 aaKnown RBP18.35■□□□□ 0.53
CASC3-203ENST00000418132 CLCF1Q9UBD9 225 aa18.35■□□□□ 0.53
CASC3-203ENST00000418132 LHFPL6Q9Y693 200 aa18.35■□□□□ 0.53
CASC3-203ENST00000418132 TRDV1A0A1B0GX56 115 aa18.34■□□□□ 0.53
CASC3-203ENST00000418132 OR14I1A6ND48 311 aa18.34■□□□□ 0.53
CASC3-203ENST00000418132 FGF9P31371 208 aaPredicted RBP18.34■□□□□ 0.53
CASC3-203ENST00000418132 GUCA1AP43080 201 aaPredicted RBP18.34■□□□□ 0.53
CASC3-203ENST00000418132 LSM6P62312 80 aaKnown RBP18.34■□□□□ 0.53
CASC3-203ENST00000418132 UNQ6494/PRO21346Q6UXR6 183 aa18.34■□□□□ 0.53
CASC3-203ENST00000418132 MCEMP1Q8IX19 187 aa18.34■□□□□ 0.53
CASC3-203ENST00000418132 CPT1CQ8TCG5 803 aa18.34■□□□□ 0.53
CASC3-203ENST00000418132 NABP1Q96AH0 204 aa18.34■□□□□ 0.53
CASC3-203ENST00000418132 ZNF837Q96EG3 531 aaPredicted RBP18.34■□□□□ 0.53
CASC3-203ENST00000418132 LINC00470Q9BZP3 86 aa18.34■□□□□ 0.53
CASC3-203ENST00000418132 NELFAQ9H3P2 528 aa18.34■□□□□ 0.53
CASC3-203ENST00000418132 CLEC4AQ9UMR7 237 aa18.34■□□□□ 0.53
CASC3-203ENST00000418132 WNT11O96014 354 aa18.33■□□□□ 0.53
CASC3-203ENST00000418132 MSR1P21757 451 aa18.33■□□□□ 0.53
CASC3-203ENST00000418132 EDNRAP25101 427 aa18.33■□□□□ 0.53
CASC3-203ENST00000418132 MRPS34P82930 218 aaKnown RBP18.33■□□□□ 0.53
CASC3-203ENST00000418132 SLC3A1Q07837 685 aa18.33■□□□□ 0.53
CASC3-203ENST00000418132 CORO6Q6QEF8 472 aa18.33■□□□□ 0.53
CASC3-203ENST00000418132 DEGS2Q6QHC5 323 aa18.33■□□□□ 0.53
CASC3-203ENST00000418132 KRT77Q7Z794 578 aa18.33■□□□□ 0.53
CASC3-203ENST00000418132 HTRA1Q92743 480 aa18.33■□□□□ 0.53
CASC3-203ENST00000418132 GHSRQ92847 366 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms