RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 A0A1B0GX30 115 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 A0A1W2PPM1 405 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 DHRS12A0PJE2 317 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 GSAPA4D1B5 854 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 OR2A25A4D2G3 310 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 C5orf51A6NDU8 294 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 UNC119BA6NIH7 251 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 HSPB2A8KAH6 182 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 C5orf58C9J3I9 102 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 LRRN3E7EW58 273 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 SGK494L7N484 410 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 EI24O14681 340 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 TP53I11O14683 189 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 CASKO14936 926 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 PPIHO43447 177 aaKnown RBP4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 FMO6PO60774 539 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 SPDEFO95238 335 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 MPC2O95563 127 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 CSTAP01040 98 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 CRYGCP07315 174 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 FHP07954 510 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 CELA2AP08217 269 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 COX6A1P12074 109 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 NCF1P14598 390 aaPredicted RBP4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 RCC1P18754 421 aaPredicted RBP4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 EFNA1P20827 205 aaPredicted RBP4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 AHCYP23526 432 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 MAGEB1P43366 347 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 GABRA4P48169 554 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 ATP4BP51164 291 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 CCR4P51679 360 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 PRKXP51817 358 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 EEFSECP57772 596 aaKnown RBP4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 SNRPD2P62316 118 aaKnown RBP4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 POLR2LP62875 67 aaKnown RBP4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 SLC35A2P78381 396 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 RPA4Q13156 261 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 CHIT1Q13231 466 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 CAMK2DQ13557 499 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 PRPSAP1Q14558 356 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 USF2Q15853 346 aaPredicted RBP4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 HSPB2Q16082 182 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 LCN1P1Q5VSP4 162 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 FBXW9Q5XUX1 488 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 CYB5R2Q6BCY4 276 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 TXNRD3NBQ6F5E7 133 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 EPGNQ6UW88 154 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 NDUFAF7Q7L592 441 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 SLC46A3Q7Z3Q1 461 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 HSD11B1LQ7Z5J1 315 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 MISPQ8IVT2 679 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 DDIASQ8IXT1 998 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 LRRC18Q8N456 261 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 HORMAD2Q8N7B1 307 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 HSD17B11Q8NBQ5 300 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 C17orf47Q8NEP4 570 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 OR9A2Q8NGT5 310 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 OR5K1Q8NHB7 308 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 OR14A16Q8NHC5 309 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 NEK7Q8TDX7 302 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 C3orf49Q96BT1 292 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 C8orf44Q96CB5 159 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 DNAJC19Q96DA6 116 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 MRPS24Q96EL2 167 aaKnown RBP4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 LINGO1Q96FE5 620 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 FBXL20Q96IG2 436 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 OR2M2Q96R28 347 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 PRRT1Q99946 306 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 UTP23Q9BRU9 249 aaKnown RBP4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 TRMOQ9BU70 441 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 MECRQ9BV79 373 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 TEX12Q9BXU0 123 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 ACTR6Q9GZN1 396 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 PIGMQ9H3S5 423 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 ZNF703Q9H7S9 590 aaPredicted RBP4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 CHODLQ9H9P2 273 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 MIEF1Q9NQG6 463 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 G6PC2Q9NQR9 355 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 EIF2B3Q9NR50 452 aaKnown RBP4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 SLC22A11Q9NSA0 550 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 TREX1Q9NSU2 369 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 ACSS1Q9NUB1 689 aaPredicted RBP4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 AURKAIP1Q9NWT8 199 aaPredicted RBP4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 HRASLS2Q9NWW9 162 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 LHX3Q9UBR4 397 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 AASSQ9UDR5 926 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 PPIEQ9UNP9 301 aaKnown RBP4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 SNX10Q9Y5X0 201 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 VWFP04275 2813 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 A0A0A6YYH2 397 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 A0A1W2PQ09 198 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 FABP12A6NFH5 140 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 A6NJ64 397 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 AP4M1O00189 453 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 WWP2O00308 870 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 BCKDKO14874 412 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 DSCR3O14972 297 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 ANKRD28O15084 1053 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 LDLRAD4O15165 306 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 SSX4O60224 188 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms