RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 NMNAT2Q9BZQ4 307 aa7.42□□□□□ -1.22
TRIM48-201ENST00000417545 OR10A4Q9H209 315 aa7.42□□□□□ -1.22
TRIM48-201ENST00000417545 CHCHD3Q9NX63 227 aaKnown RBP7.42□□□□□ -1.22
TRIM48-201ENST00000417545 PLEK2Q9NYT0 353 aa7.42□□□□□ -1.22
TRIM48-201ENST00000417545 ASH2LQ9UBL3 628 aa7.42□□□□□ -1.22
TRIM48-201ENST00000417545 BLOC1S6Q9UL45 172 aa7.42□□□□□ -1.22
TRIM48-201ENST00000417545 UGT2A1Q9Y4X1 527 aa7.42□□□□□ -1.22
TRIM48-201ENST00000417545 PCDHGB1Q9Y5G3 927 aa7.42□□□□□ -1.22
TRIM48-201ENST00000417545 TMEM14AQ9Y6G1 99 aa7.42□□□□□ -1.22
TRIM48-201ENST00000417545 COMMD3-BMI1R4GMX3 469 aa7.42□□□□□ -1.22
TRIM48-201ENST00000417545 POLEQ07864 2286 aa7.41□□□□□ -1.22
TRIM48-201ENST00000417545 ZNF670-ZNF695F2Z2N8 137 aa7.41□□□□□ -1.22
TRIM48-201ENST00000417545 ZNF593O00488 134 aaPredicted RBP7.41□□□□□ -1.22
TRIM48-201ENST00000417545 PHYHO14832 338 aa7.41□□□□□ -1.22
TRIM48-201ENST00000417545 SGCEO43556 437 aa7.41□□□□□ -1.22
TRIM48-201ENST00000417545 SELENOFO60613 162 aa7.41□□□□□ -1.22
TRIM48-201ENST00000417545 MPZL1O95297 269 aa7.41□□□□□ -1.22
TRIM48-201ENST00000417545 HRGP04196 525 aa7.41□□□□□ -1.22
TRIM48-201ENST00000417545 GAAP10253 952 aa7.41□□□□□ -1.22
TRIM48-201ENST00000417545 COX6B1P14854 86 aa7.41□□□□□ -1.22
TRIM48-201ENST00000417545 ZNF32P17041 273 aa7.41□□□□□ -1.22
TRIM48-201ENST00000417545 CCNOP22674 350 aa7.41□□□□□ -1.22
TRIM48-201ENST00000417545 MYF6P23409 242 aa7.41□□□□□ -1.22
TRIM48-201ENST00000417545 APLNRP35414 380 aa7.41□□□□□ -1.22
TRIM48-201ENST00000417545 ZNF83P51522 516 aa7.41□□□□□ -1.22
TRIM48-201ENST00000417545 IDH3GP51553 393 aaPredicted RBP7.41□□□□□ -1.22
TRIM48-201ENST00000417545 RAB1AP62820 205 aa7.41□□□□□ -1.22
TRIM48-201ENST00000417545 ACTC1P68032 377 aa7.41□□□□□ -1.22
TRIM48-201ENST00000417545 ACTA1P68133 377 aa7.41□□□□□ -1.22
TRIM48-201ENST00000417545 ZNF91Q05481 1191 aa7.41□□□□□ -1.22
TRIM48-201ENST00000417545 DBPQ10586 325 aaPredicted RBP7.41□□□□□ -1.22
TRIM48-201ENST00000417545 SNTB1Q13884 538 aaKnown RBP7.41□□□□□ -1.22
TRIM48-201ENST00000417545 CDSNQ15517 529 aa7.41□□□□□ -1.22
TRIM48-201ENST00000417545 KLHL22Q53GT1 634 aa7.41□□□□□ -1.22
TRIM48-201ENST00000417545 C1QTNF12Q5T7M4 302 aa7.41□□□□□ -1.22
TRIM48-201ENST00000417545 FAM27BQ5VT28 67 aa7.41□□□□□ -1.22
TRIM48-201ENST00000417545 AADACL4Q5VUY2 407 aa7.41□□□□□ -1.22
TRIM48-201ENST00000417545 OTPQ5XKR4 325 aa7.41□□□□□ -1.22
TRIM48-201ENST00000417545 SLC18B1Q6NT16 456 aa7.41□□□□□ -1.22
TRIM48-201ENST00000417545 LYPD4Q6UWN0 246 aa7.41□□□□□ -1.22
TRIM48-201ENST00000417545 B3GLCTQ6Y288 498 aa7.41□□□□□ -1.22
TRIM48-201ENST00000417545 FOXL2NBQ6ZUU3 175 aa7.41□□□□□ -1.22
TRIM48-201ENST00000417545 SLC16A9Q7RTY1 509 aa7.41□□□□□ -1.22
TRIM48-201ENST00000417545 MDP1Q86V88 176 aa7.41□□□□□ -1.22
TRIM48-201ENST00000417545 SKA3Q8IX90 412 aa7.41□□□□□ -1.22
TRIM48-201ENST00000417545 SLC35F2Q8IXU6 374 aa7.41□□□□□ -1.22
TRIM48-201ENST00000417545 ZNF786Q8N393 782 aa7.41□□□□□ -1.22
TRIM48-201ENST00000417545 STX19Q8N4C7 294 aa7.41□□□□□ -1.22
TRIM48-201ENST00000417545 ZNF540Q8NDQ6 660 aa7.41□□□□□ -1.22
TRIM48-201ENST00000417545 GJC3Q8NFK1 279 aa7.41□□□□□ -1.22
TRIM48-201ENST00000417545 BPIFB6Q8NFQ5 453 aa7.41□□□□□ -1.22
TRIM48-201ENST00000417545 OR10H4Q8NGA5 316 aa7.41□□□□□ -1.22
TRIM48-201ENST00000417545 RHOXF1Q8NHV9 184 aa7.41□□□□□ -1.22
TRIM48-201ENST00000417545 NABP1Q96AH0 204 aa7.41□□□□□ -1.22
TRIM48-201ENST00000417545 TBX5Q99593 518 aa7.41□□□□□ -1.22
TRIM48-201ENST00000417545 WACQ9BTA9 647 aa7.41□□□□□ -1.22
TRIM48-201ENST00000417545 C1QTNF6Q9BXI9 259 aa7.41□□□□□ -1.22
TRIM48-201ENST00000417545 C1orf198Q9H425 327 aa7.41□□□□□ -1.22
TRIM48-201ENST00000417545 WDR76Q9H967 626 aa7.41□□□□□ -1.22
TRIM48-201ENST00000417545 CDH20Q9HBT6 801 aa7.41□□□□□ -1.22
TRIM48-201ENST00000417545 AASSQ9UDR5 926 aa7.41□□□□□ -1.22
TRIM48-201ENST00000417545 IKZF2Q9UKS7 526 aa7.41□□□□□ -1.22
TRIM48-201ENST00000417545 TIMM10BQ9Y5J6 103 aa7.41□□□□□ -1.22
TRIM48-201ENST00000417545 KLF2Q9Y5W3 355 aaPredicted RBP7.41□□□□□ -1.22
TRIM48-201ENST00000417545 HCFC1P51610 2035 aa7.41□□□□□ -1.22
TRIM48-201ENST00000417545 NBASA2RRP1 2371 aa7.4□□□□□ -1.22
TRIM48-201ENST00000417545 ARPC4-TTLL3A0A0A6YYG9 625 aa7.4□□□□□ -1.22
TRIM48-201ENST00000417545 DAPL1A0PJW8 107 aa7.4□□□□□ -1.22
TRIM48-201ENST00000417545 CCDC182A6NF36 153 aa7.4□□□□□ -1.22
TRIM48-201ENST00000417545 EFCAB10A6NFE3 127 aa7.4□□□□□ -1.22
TRIM48-201ENST00000417545 APOL3O95236 402 aa7.4□□□□□ -1.22
TRIM48-201ENST00000417545 FADS2O95864 444 aaKnown RBP7.4□□□□□ -1.22
TRIM48-201ENST00000417545 TFP02787 698 aa7.4□□□□□ -1.22
TRIM48-201ENST00000417545 LYNP07948 512 aa7.4□□□□□ -1.22
TRIM48-201ENST00000417545 H2BFMP0C1H6 154 aa7.4□□□□□ -1.22
TRIM48-201ENST00000417545 PATE4P0C8F1 98 aa7.4□□□□□ -1.22
TRIM48-201ENST00000417545 DBTP11182 482 aaKnown RBP7.4□□□□□ -1.22
TRIM48-201ENST00000417545 MYL12AP19105 171 aa7.4□□□□□ -1.22
TRIM48-201ENST00000417545 SLC2A5P22732 501 aa7.4□□□□□ -1.22
TRIM48-201ENST00000417545 EEF1B2P24534 225 aaKnown RBP7.4□□□□□ -1.22
TRIM48-201ENST00000417545 GRNP28799 593 aaKnown RBP7.4□□□□□ -1.22
TRIM48-201ENST00000417545 HSD11B1P28845 292 aa7.4□□□□□ -1.22
TRIM48-201ENST00000417545 CCKARP32238 428 aa7.4□□□□□ -1.22
TRIM48-201ENST00000417545 HTR5AP47898 357 aa7.4□□□□□ -1.22
TRIM48-201ENST00000417545 GDI2P50395 445 aaKnown RBP7.4□□□□□ -1.22
TRIM48-201ENST00000417545 CSNK2BP67870 215 aa7.4□□□□□ -1.22
TRIM48-201ENST00000417545 GALK2Q01415 458 aa7.4□□□□□ -1.22
TRIM48-201ENST00000417545 CDK5R2Q13319 367 aa7.4□□□□□ -1.22
TRIM48-201ENST00000417545 RAB35Q15286 201 aa7.4□□□□□ -1.22
TRIM48-201ENST00000417545 TAB1Q15750 504 aa7.4□□□□□ -1.22
TRIM48-201ENST00000417545 KCNMB1Q16558 191 aa7.4□□□□□ -1.22
TRIM48-201ENST00000417545 TBC1D28Q2M2D7 210 aa7.4□□□□□ -1.22
TRIM48-201ENST00000417545 SLC25A30Q5SVS4 291 aa7.4□□□□□ -1.22
TRIM48-201ENST00000417545 KCTD18Q6PI47 426 aaPredicted RBP7.4□□□□□ -1.22
TRIM48-201ENST00000417545 CORO6Q6QEF8 472 aa7.4□□□□□ -1.22
TRIM48-201ENST00000417545 ARL9Q6T311 187 aa7.4□□□□□ -1.22
TRIM48-201ENST00000417545 UGT2A3Q6UWM9 527 aa7.4□□□□□ -1.22
TRIM48-201ENST00000417545 TMEM108Q6UXF1 575 aa7.4□□□□□ -1.22
TRIM48-201ENST00000417545 USP51Q70EK9 711 aa7.4□□□□□ -1.22
TRIM48-201ENST00000417545 SPATC1Q76KD6 591 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms