RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 CA5BP1Q8WTZ4 195 aa13.32□□□□□ -0.28
NCKIPSD-204ENST00000416649 SMARCD2Q92925 531 aa13.32□□□□□ -0.28
NCKIPSD-204ENST00000416649 FAM3DQ96BQ1 224 aa13.32□□□□□ -0.28
NCKIPSD-204ENST00000416649 SDF2Q99470 211 aa13.32□□□□□ -0.28
NCKIPSD-204ENST00000416649 TMEM100Q9NV29 134 aa13.32□□□□□ -0.28
NCKIPSD-204ENST00000416649 TRPM6Q9BX84 2022 aa13.32□□□□□ -0.28
NCKIPSD-204ENST00000416649 MSGN1A6NI15 193 aa13.31□□□□□ -0.28
NCKIPSD-204ENST00000416649 FAM157CP0CG43 387 aa13.31□□□□□ -0.28
NCKIPSD-204ENST00000416649 CCKBRP32239 447 aa13.31□□□□□ -0.28
NCKIPSD-204ENST00000416649 SERPINF1P36955 418 aa13.31□□□□□ -0.28
NCKIPSD-204ENST00000416649 GLP1RP43220 463 aa13.31□□□□□ -0.28
NCKIPSD-204ENST00000416649 LSSP48449 732 aa13.31□□□□□ -0.28
NCKIPSD-204ENST00000416649 DNM1P46Q6ZS02 220 aa13.31□□□□□ -0.28
NCKIPSD-204ENST00000416649 AKR7LQ8NHP1 331 aa13.31□□□□□ -0.28
NCKIPSD-204ENST00000416649 EDAQ92838 391 aa13.31□□□□□ -0.28
NCKIPSD-204ENST00000416649 SEH1LQ96EE3 360 aa13.31□□□□□ -0.28
NCKIPSD-204ENST00000416649 FAM83CQ9BQN1 747 aa13.31□□□□□ -0.28
NCKIPSD-204ENST00000416649 KLF15Q9UIH9 416 aa13.31□□□□□ -0.28
NCKIPSD-204ENST00000416649 ADAM29Q9UKF5 820 aa13.31□□□□□ -0.28
NCKIPSD-204ENST00000416649 C7orf77A4D0Y5 90 aa13.31□□□□□ -0.28
NCKIPSD-204ENST00000416649 TVP23AA6NH52 213 aa13.31□□□□□ -0.28
NCKIPSD-204ENST00000416649 LILRB5O75023 590 aa13.31□□□□□ -0.28
NCKIPSD-204ENST00000416649 RDH16O75452 317 aa13.31□□□□□ -0.28
NCKIPSD-204ENST00000416649 FGF19O95750 216 aa13.31□□□□□ -0.28
NCKIPSD-204ENST00000416649 IGHV2-5P01817 119 aa13.31□□□□□ -0.28
NCKIPSD-204ENST00000416649 NGFRP08138 427 aa13.31□□□□□ -0.28
NCKIPSD-204ENST00000416649 S100A2P29034 98 aa13.31□□□□□ -0.28
NCKIPSD-204ENST00000416649 DLX2Q07687 328 aaPredicted RBP13.31□□□□□ -0.28
NCKIPSD-204ENST00000416649 PDZD11Q5EBL8 140 aa13.31□□□□□ -0.28
NCKIPSD-204ENST00000416649 LYG2Q86SG7 212 aa13.31□□□□□ -0.28
NCKIPSD-204ENST00000416649 OR13C8Q8NGS7 320 aa13.31□□□□□ -0.28
NCKIPSD-204ENST00000416649 CCDC74AQ96AQ1 378 aa13.31□□□□□ -0.28
NCKIPSD-204ENST00000416649 KIRREL1Q96J84 757 aa13.31□□□□□ -0.28
NCKIPSD-204ENST00000416649 RGCCQ9H4X1 137 aa13.31□□□□□ -0.28
NCKIPSD-204ENST00000416649 RXFP3Q9NSD7 469 aa13.31□□□□□ -0.28
NCKIPSD-204ENST00000416649 MRPS33Q9Y291 106 aaKnown RBP13.31□□□□□ -0.28
NCKIPSD-204ENST00000416649 KLHDC2Q9Y2U9 406 aa13.31□□□□□ -0.28
NCKIPSD-204ENST00000416649 C5orf67F2Z3F1 127 aa13.3□□□□□ -0.28
NCKIPSD-204ENST00000416649 VEGFDO43915 354 aa13.3□□□□□ -0.28
NCKIPSD-204ENST00000416649 CD14P08571 375 aa13.3□□□□□ -0.28
NCKIPSD-204ENST00000416649 RIDAP52758 137 aaKnown RBP13.3□□□□□ -0.28
NCKIPSD-204ENST00000416649 GAS6Q14393 721 aa13.3□□□□□ -0.28
NCKIPSD-204ENST00000416649 SSX2Q16385 188 aa13.3□□□□□ -0.28
NCKIPSD-204ENST00000416649 CYB5R2Q6BCY4 276 aa13.3□□□□□ -0.28
NCKIPSD-204ENST00000416649 RNF44Q7L0R7 432 aa13.3□□□□□ -0.28
NCKIPSD-204ENST00000416649 ZSCAN4Q8NAM6 433 aaPredicted RBP13.3□□□□□ -0.28
NCKIPSD-204ENST00000416649 BHLHE23Q8NDY6 225 aa13.3□□□□□ -0.28
NCKIPSD-204ENST00000416649 GPX8Q8TED1 209 aa13.3□□□□□ -0.28
NCKIPSD-204ENST00000416649 ARRDC3Q96B67 414 aa13.3□□□□□ -0.28
NCKIPSD-204ENST00000416649 C14orf144Q96I85 54 aa13.3□□□□□ -0.28
NCKIPSD-204ENST00000416649 ELF4Q99607 663 aaPredicted RBP13.3□□□□□ -0.28
NCKIPSD-204ENST00000416649 C2orf16Q68DN1 1984 aa13.3□□□□□ -0.28
NCKIPSD-204ENST00000416649 TMEM235A6NFC5 223 aa13.3□□□□□ -0.28
NCKIPSD-204ENST00000416649 NUDT19A8MXV4 375 aa13.3□□□□□ -0.28
NCKIPSD-204ENST00000416649 H7C1Q1 480 aa13.3□□□□□ -0.28
NCKIPSD-204ENST00000416649 RAB6AP20340 208 aa13.3□□□□□ -0.28
NCKIPSD-204ENST00000416649 BCL6P41182 706 aa13.3□□□□□ -0.28
NCKIPSD-204ENST00000416649 TRA2BP62995 288 aaKnown RBP13.3□□□□□ -0.28
NCKIPSD-204ENST00000416649 RAB11BQ15907 218 aa13.3□□□□□ -0.28
NCKIPSD-204ENST00000416649 FRMD1Q8N878 549 aa13.3□□□□□ -0.28
NCKIPSD-204ENST00000416649 ZNF615Q8N8J6 731 aa13.3□□□□□ -0.28
NCKIPSD-204ENST00000416649 FGF14Q92915 247 aa13.3□□□□□ -0.28
NCKIPSD-204ENST00000416649 EGLN1Q9GZT9 426 aa13.3□□□□□ -0.28
NCKIPSD-204ENST00000416649 PRO1933Q9H354 126 aa13.3□□□□□ -0.28
NCKIPSD-204ENST00000416649 SRA1Q9HD15 236 aaKnown RBP13.3□□□□□ -0.28
NCKIPSD-204ENST00000416649 PRR13Q9NZ81 148 aa13.3□□□□□ -0.28
NCKIPSD-204ENST00000416649 KCNE5Q9UJ90 142 aa13.3□□□□□ -0.28
NCKIPSD-204ENST00000416649 ICAM5Q9UMF0 924 aa13.3□□□□□ -0.28
NCKIPSD-204ENST00000416649 DOCK8Q8NF50 2099 aa13.3□□□□□ -0.28
NCKIPSD-204ENST00000416649 DCTN6O00399 190 aa13.29□□□□□ -0.28
NCKIPSD-204ENST00000416649 NDUFB2O95178 105 aa13.29□□□□□ -0.28
NCKIPSD-204ENST00000416649 SLC34A2O95436 690 aa13.29□□□□□ -0.28
NCKIPSD-204ENST00000416649 HTR5AP47898 357 aa13.29□□□□□ -0.28
NCKIPSD-204ENST00000416649 RAB5CP51148 216 aa13.29□□□□□ -0.28
NCKIPSD-204ENST00000416649 EBPQ15125 230 aaKnown RBP13.29□□□□□ -0.28
NCKIPSD-204ENST00000416649 C21orf62-AS1Q17RA5 79 aa13.29□□□□□ -0.28
NCKIPSD-204ENST00000416649 C2orf27AQ580R0 203 aa13.29□□□□□ -0.28
NCKIPSD-204ENST00000416649 ALG10BQ5I7T1 473 aa13.29□□□□□ -0.28
NCKIPSD-204ENST00000416649 PARM1Q6UWI2 310 aa13.29□□□□□ -0.28
NCKIPSD-204ENST00000416649 VITQ6UXI7 678 aa13.29□□□□□ -0.28
NCKIPSD-204ENST00000416649 TAF8Q7Z7C8 310 aa13.29□□□□□ -0.28
NCKIPSD-204ENST00000416649 TMEFF1Q8IYR6 380 aa13.29□□□□□ -0.28
NCKIPSD-204ENST00000416649 ZNF565Q8N9K5 539 aa13.29□□□□□ -0.28
NCKIPSD-204ENST00000416649 MARS2Q96GW9 593 aaKnown RBP13.29□□□□□ -0.28
NCKIPSD-204ENST00000416649 SSX3Q99909 188 aa13.29□□□□□ -0.28
NCKIPSD-204ENST00000416649 OCSTAMPQ9BR26 566 aa13.29□□□□□ -0.28
NCKIPSD-204ENST00000416649 OR52A5Q9H2C5 316 aa13.29□□□□□ -0.28
NCKIPSD-204ENST00000416649 VPS13AQ96RL7 3174 aa13.29□□□□□ -0.28
NCKIPSD-204ENST00000416649 A0A1B0GWA3 101 aa13.29□□□□□ -0.28
NCKIPSD-204ENST00000416649 A0A1W2PPE2 198 aa13.29□□□□□ -0.28
NCKIPSD-204ENST00000416649 C9orf170A2RU37 121 aa13.29□□□□□ -0.28
NCKIPSD-204ENST00000416649 IFNA2P01563 188 aa13.29□□□□□ -0.28
NCKIPSD-204ENST00000416649 CRHP06850 196 aa13.29□□□□□ -0.28
NCKIPSD-204ENST00000416649 ERCC1P07992 297 aaPredicted RBP13.29□□□□□ -0.28
NCKIPSD-204ENST00000416649 TACSTD2P09758 323 aa13.29□□□□□ -0.28
NCKIPSD-204ENST00000416649 BTF3P20290 206 aaKnown RBP13.29□□□□□ -0.28
NCKIPSD-204ENST00000416649 MAOAP21397 527 aa13.29□□□□□ -0.28
NCKIPSD-204ENST00000416649 GDI1P31150 447 aa13.29□□□□□ -0.28
NCKIPSD-204ENST00000416649 NDUFA6P56556 154 aa13.29□□□□□ -0.28
NCKIPSD-204ENST00000416649 BTN3A2P78410 334 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms