RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 UBTD1Q9HAC8 227 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 C12orf10Q9HB07 376 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 SPAG4Q9NPE6 437 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 SLC7A10Q9NS82 523 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 C20orf141Q9NUB4 165 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 MED29Q9NX70 200 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 ELOVL5Q9NYP7 299 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 B3GAT1Q9P2W7 334 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 ABCD2Q9UBJ2 740 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 UPB1Q9UBR1 384 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 RIMS3Q9UJD0 308 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 A4GNTQ9UNA3 340 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 PLEKHA6Q9Y2H5 1048 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 DSCAMO60469 2012 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 MYO9AB2RTY4 2548 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.26□□□□□ -1.73
VPS41-205ENST00000414632 CIB4A0PJX0 185 aa4.26□□□□□ -1.73
VPS41-205ENST00000414632 DBX1A6NMT0 343 aa4.26□□□□□ -1.73
VPS41-205ENST00000414632 MS4A18H0YCH9 400 aa4.26□□□□□ -1.73
VPS41-205ENST00000414632 BLOC1S5-TXNDC5H3BN57 136 aa4.26□□□□□ -1.73
VPS41-205ENST00000414632 GPR171O14626 319 aa4.26□□□□□ -1.73
VPS41-205ENST00000414632 FFAR1O14842 300 aa4.26□□□□□ -1.73
VPS41-205ENST00000414632 ARPC2O15144 300 aa4.26□□□□□ -1.73
VPS41-205ENST00000414632 CLOCKO15516 846 aa4.26□□□□□ -1.73
VPS41-205ENST00000414632 TRAF3IP2O43734 574 aaPredicted RBP4.26□□□□□ -1.73
VPS41-205ENST00000414632 FMO6PO60774 539 aa4.26□□□□□ -1.73
VPS41-205ENST00000414632 KRT33AO76009 404 aa4.26□□□□□ -1.73
VPS41-205ENST00000414632 OR5F1O95221 314 aa4.26□□□□□ -1.73
VPS41-205ENST00000414632 OR6A2O95222 327 aa4.26□□□□□ -1.73
VPS41-205ENST00000414632 IFNA14P01570 189 aa4.26□□□□□ -1.73
VPS41-205ENST00000414632 IFNW1P05000 195 aa4.26□□□□□ -1.73
VPS41-205ENST00000414632 NPSP0C0P6 89 aa4.26□□□□□ -1.73
VPS41-205ENST00000414632 ADORA3P0DMS8 318 aa4.26□□□□□ -1.73
VPS41-205ENST00000414632 T-ENOLP0DO92 83 aa4.26□□□□□ -1.73
VPS41-205ENST00000414632 APEHP13798 732 aaKnown RBP4.26□□□□□ -1.73
VPS41-205ENST00000414632 ZNF43P17038 809 aa4.26□□□□□ -1.73
VPS41-205ENST00000414632 NDUFB7P17568 137 aa4.26□□□□□ -1.73
VPS41-205ENST00000414632 ATP6V1B2P21281 511 aa4.26□□□□□ -1.73
VPS41-205ENST00000414632 CRYGSP22914 178 aa4.26□□□□□ -1.73
VPS41-205ENST00000414632 LOXP28300 417 aaPredicted RBP4.26□□□□□ -1.73
VPS41-205ENST00000414632 PEX19P40855 299 aa4.26□□□□□ -1.73
VPS41-205ENST00000414632 MTNR1AP48039 350 aa4.26□□□□□ -1.73
VPS41-205ENST00000414632 ZNF83P51522 516 aa4.26□□□□□ -1.73
VPS41-205ENST00000414632 SELENOWP63302 87 aa4.26□□□□□ -1.73
VPS41-205ENST00000414632 SPOCK1Q08629 439 aa4.26□□□□□ -1.73
VPS41-205ENST00000414632 ITGADQ13349 1161 aa4.26□□□□□ -1.73
VPS41-205ENST00000414632 PMS2P3Q13401 168 aa4.26□□□□□ -1.73
VPS41-205ENST00000414632 CAMK2DQ13557 499 aa4.26□□□□□ -1.73
VPS41-205ENST00000414632 MELKQ14680 651 aa4.26□□□□□ -1.73
VPS41-205ENST00000414632 DAZAP2Q15038 168 aaPredicted RBP4.26□□□□□ -1.73
VPS41-205ENST00000414632 PDK3Q15120 406 aa4.26□□□□□ -1.73
VPS41-205ENST00000414632 ZNF74Q16587 644 aa4.26□□□□□ -1.73
VPS41-205ENST00000414632 MS4A18Q3C1V0 323 aa4.26□□□□□ -1.73
VPS41-205ENST00000414632 HIKESHIQ53FT3 197 aa4.26□□□□□ -1.73
VPS41-205ENST00000414632 IFI44LQ53G44 452 aa4.26□□□□□ -1.73
VPS41-205ENST00000414632 RNASE12Q5GAN4 147 aaKnown RBP4.26□□□□□ -1.73
VPS41-205ENST00000414632 PHYHD1Q5SRE7 291 aa4.26□□□□□ -1.73
VPS41-205ENST00000414632 TBPL2Q6SJ96 375 aa4.26□□□□□ -1.73
VPS41-205ENST00000414632 Q6ZT83 130 aa4.26□□□□□ -1.73
VPS41-205ENST00000414632 SLC46A3Q7Z3Q1 461 aa4.26□□□□□ -1.73
VPS41-205ENST00000414632 NANOGNBQ7Z5D8 188 aa4.26□□□□□ -1.73
VPS41-205ENST00000414632 UEVLDQ8IX04 471 aa4.26□□□□□ -1.73
VPS41-205ENST00000414632 PGAM4Q8N0Y7 254 aa4.26□□□□□ -1.73
VPS41-205ENST00000414632 ZNF433Q8N7K0 673 aaPredicted RBP4.26□□□□□ -1.73
VPS41-205ENST00000414632 ADPRHL1Q8NDY3 354 aa4.26□□□□□ -1.73
VPS41-205ENST00000414632 STEAP2Q8NFT2 490 aa4.26□□□□□ -1.73
VPS41-205ENST00000414632 MOSPD2Q8NHP6 518 aa4.26□□□□□ -1.73
VPS41-205ENST00000414632 TMEM239Q8WW34 195 aa4.26□□□□□ -1.73
VPS41-205ENST00000414632 LZICQ8WZA0 190 aa4.26□□□□□ -1.73
VPS41-205ENST00000414632 TMEM45BQ96B21 275 aa4.26□□□□□ -1.73
VPS41-205ENST00000414632 PERPQ96FX8 193 aa4.26□□□□□ -1.73
VPS41-205ENST00000414632 PRRC1Q96M27 445 aa4.26□□□□□ -1.73
VPS41-205ENST00000414632 DACH2Q96NX9 599 aa4.26□□□□□ -1.73
VPS41-205ENST00000414632 EPYCQ99645 322 aa4.26□□□□□ -1.73
VPS41-205ENST00000414632 PIP5K1AQ99755 562 aa4.26□□□□□ -1.73
VPS41-205ENST00000414632 TMEM43Q9BTV4 400 aa4.26□□□□□ -1.73
VPS41-205ENST00000414632 SLCO5A1Q9H2Y9 848 aa4.26□□□□□ -1.73
VPS41-205ENST00000414632 FANCFQ9NPI8 374 aa4.26□□□□□ -1.73
VPS41-205ENST00000414632 MEPEQ9NQ76 525 aaPredicted RBP4.26□□□□□ -1.73
VPS41-205ENST00000414632 ASB6Q9NWX5 421 aa4.26□□□□□ -1.73
VPS41-205ENST00000414632 ZNF226Q9NYT6 803 aa4.26□□□□□ -1.73
VPS41-205ENST00000414632 NPAP1Q9NZP6 1156 aa4.26□□□□□ -1.73
VPS41-205ENST00000414632 RPS6KA6Q9UK32 745 aa4.26□□□□□ -1.73
VPS41-205ENST00000414632 RASD1Q9Y272 281 aa4.26□□□□□ -1.73
VPS41-205ENST00000414632 AP3M1Q9Y2T2 418 aa4.26□□□□□ -1.73
VPS41-205ENST00000414632 ABCA4P78363 2273 aa4.26□□□□□ -1.73
VPS41-205ENST00000414632 ITPR3Q14573 2671 aa4.26□□□□□ -1.73
VPS41-205ENST00000414632 SPG11Q96JI7 2443 aa4.25□□□□□ -1.73
VPS41-205ENST00000414632 TRAV27A0A087WT01 109 aa4.25□□□□□ -1.73
VPS41-205ENST00000414632 TEX13CA0A0J9YWL9 993 aa4.25□□□□□ -1.73
VPS41-205ENST00000414632 VGLL3A8MV65 326 aa4.25□□□□□ -1.73
VPS41-205ENST00000414632 ZNF587BE7ETH6 402 aa4.25□□□□□ -1.73
VPS41-205ENST00000414632 H0YIZ8 118 aa4.25□□□□□ -1.73
VPS41-205ENST00000414632 M0R1B8 84 aa4.25□□□□□ -1.73
VPS41-205ENST00000414632 M0R3G1 203 aa4.25□□□□□ -1.73
VPS41-205ENST00000414632 PLPP3O14495 311 aa4.25□□□□□ -1.73
VPS41-205ENST00000414632 PRYO14603 147 aa4.25□□□□□ -1.73
VPS41-205ENST00000414632 RNF13O43567 381 aa4.25□□□□□ -1.73
VPS41-205ENST00000414632 OR2T1O43869 369 aa4.25□□□□□ -1.73
VPS41-205ENST00000414632 GMNNO75496 209 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms