RNA–Protein interactions for RNA: ENST00000414241.7

RBBP4-204, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RBBP4, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-204ENST00000414241 WT1P19544 449 aaPredicted RBP13.04□□□□□ -0.32
RBBP4-204ENST00000414241 RAB3BP20337 219 aa13.04□□□□□ -0.32
RBBP4-204ENST00000414241 SDHBP21912 280 aa13.04□□□□□ -0.32
RBBP4-204ENST00000414241 SRSF6Q13247 344 aaKnown RBP13.04□□□□□ -0.32
RBBP4-204ENST00000414241 FOXL2NBQ6ZUU3 175 aa13.04□□□□□ -0.32
RBBP4-204ENST00000414241 PARP16Q8N5Y8 322 aa13.04□□□□□ -0.32
RBBP4-204ENST00000414241 FDCSPQ8NFU4 85 aa13.04□□□□□ -0.32
RBBP4-204ENST00000414241 OR13C5Q8NGS8 318 aa13.04□□□□□ -0.32
RBBP4-204ENST00000414241 SLC39A7Q92504 469 aa13.04□□□□□ -0.32
RBBP4-204ENST00000414241 HSD17B8Q92506 261 aa13.04□□□□□ -0.32
RBBP4-204ENST00000414241 OR14A2Q96R54 314 aa13.04□□□□□ -0.32
RBBP4-204ENST00000414241 ATF6BQ99941 703 aa13.04□□□□□ -0.32
RBBP4-204ENST00000414241 SLITRK2Q9H156 845 aa13.04□□□□□ -0.32
RBBP4-204ENST00000414241 NIPAL2Q9H841 368 aa13.04□□□□□ -0.32
RBBP4-204ENST00000414241 ADAM30Q9UKF2 790 aa13.04□□□□□ -0.32
RBBP4-204ENST00000414241 LRP12Q9Y561 859 aa13.04□□□□□ -0.32
RBBP4-204ENST00000414241 FLVCR1Q9Y5Y0 555 aa13.04□□□□□ -0.32
RBBP4-204ENST00000414241 R4GMQ9 66 aa13.04□□□□□ -0.32
RBBP4-204ENST00000414241 ANKRD61A6NGH8 418 aa13.03□□□□□ -0.32
RBBP4-204ENST00000414241 DVL2O14641 736 aa13.03□□□□□ -0.32
RBBP4-204ENST00000414241 DHHO43323 396 aa13.03□□□□□ -0.32
RBBP4-204ENST00000414241 CEACAM4O75871 244 aa13.03□□□□□ -0.32
RBBP4-204ENST00000414241 H2BFMP0C1H6 154 aa13.03□□□□□ -0.32
RBBP4-204ENST00000414241 RFC3P40938 356 aa13.03□□□□□ -0.32
RBBP4-204ENST00000414241 ZNF84P51523 738 aa13.03□□□□□ -0.32
RBBP4-204ENST00000414241 CLDN18P56856 261 aa13.03□□□□□ -0.32
RBBP4-204ENST00000414241 FAM27D1Q5T7N8 215 aa13.03□□□□□ -0.32
RBBP4-204ENST00000414241 FCRLAQ7L513 359 aa13.03□□□□□ -0.32
RBBP4-204ENST00000414241 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.03□□□□□ -0.32
RBBP4-204ENST00000414241 ABTB1Q969K4 478 aaPredicted RBP13.03□□□□□ -0.32
RBBP4-204ENST00000414241 DERL3Q96Q80 235 aa13.03□□□□□ -0.32
RBBP4-204ENST00000414241 ZCCHC4Q9H5U6 513 aa13.03□□□□□ -0.32
RBBP4-204ENST00000414241 ABCB9Q9NP78 766 aa13.03□□□□□ -0.32
RBBP4-204ENST00000414241 B3GAT2Q9NPZ5 323 aa13.03□□□□□ -0.32
RBBP4-204ENST00000414241 POLE4Q9NR33 117 aa13.03□□□□□ -0.32
RBBP4-204ENST00000414241 FOXD3Q9UJU5 478 aaPredicted RBP13.03□□□□□ -0.32
RBBP4-204ENST00000414241 POLR1DQ9Y2S0 133 aa13.03□□□□□ -0.32
RBBP4-204ENST00000414241 UGT2A1Q9Y4X1 527 aa13.03□□□□□ -0.32
RBBP4-204ENST00000414241 IGKV3D-15A0A087WSY6 115 aa13.02□□□□□ -0.32
RBBP4-204ENST00000414241 NOTOA8MTQ0 251 aa13.02□□□□□ -0.32
RBBP4-204ENST00000414241 SLC19A2O60779 497 aa13.02□□□□□ -0.32
RBBP4-204ENST00000414241 SYNGR4O95473 234 aa13.02□□□□□ -0.32
RBBP4-204ENST00000414241 CELA3AP09093 270 aa13.02□□□□□ -0.32
RBBP4-204ENST00000414241 SRMP19623 302 aa13.02□□□□□ -0.32
RBBP4-204ENST00000414241 MMP16P51512 607 aa13.02□□□□□ -0.32
RBBP4-204ENST00000414241 ZNF181Q2M3W8 571 aa13.02□□□□□ -0.32
RBBP4-204ENST00000414241 WDR38Q5JTN6 314 aa13.02□□□□□ -0.32
RBBP4-204ENST00000414241 OR7E24Q6IFN5 339 aa13.02□□□□□ -0.32
RBBP4-204ENST00000414241 ZNF704Q6ZNC4 412 aaPredicted RBP13.02□□□□□ -0.32
RBBP4-204ENST00000414241 AAED1Q7RTV5 226 aa13.02□□□□□ -0.32
RBBP4-204ENST00000414241 LINC00346Q8IVM7 164 aa13.02□□□□□ -0.32
RBBP4-204ENST00000414241 PRSS35Q8N3Z0 413 aa13.02□□□□□ -0.32
RBBP4-204ENST00000414241 ROBO4Q8WZ75 1007 aa13.02□□□□□ -0.32
RBBP4-204ENST00000414241 RGP1Q92546 391 aaPredicted RBP13.02□□□□□ -0.32
RBBP4-204ENST00000414241 TMEM45BQ96B21 275 aa13.02□□□□□ -0.32
RBBP4-204ENST00000414241 SLAMF6Q96DU3 332 aa13.02□□□□□ -0.32
RBBP4-204ENST00000414241 NOX4Q9NPH5 578 aa13.02□□□□□ -0.32
RBBP4-204ENST00000414241 TRAV17A0A0B4J275 112 aa13.02□□□□□ -0.33
RBBP4-204ENST00000414241 ISPDA4D126 451 aa13.02□□□□□ -0.33
RBBP4-204ENST00000414241 OCM2P0CE71 109 aa13.02□□□□□ -0.33
RBBP4-204ENST00000414241 MSR1P21757 451 aa13.02□□□□□ -0.33
RBBP4-204ENST00000414241 SELENOPP49908 381 aa13.02□□□□□ -0.33
RBBP4-204ENST00000414241 PSMD7P51665 324 aa13.02□□□□□ -0.33
RBBP4-204ENST00000414241 CAV3P56539 151 aa13.02□□□□□ -0.33
RBBP4-204ENST00000414241 NHLH1Q02575 133 aa13.02□□□□□ -0.33
RBBP4-204ENST00000414241 RGS21Q2M5E4 152 aa13.02□□□□□ -0.33
RBBP4-204ENST00000414241 DEFB109BQ30KR1 87 aa13.02□□□□□ -0.33
RBBP4-204ENST00000414241 RIPPLY2Q5TAB7 128 aa13.02□□□□□ -0.33
RBBP4-204ENST00000414241 OTPQ5XKR4 325 aa13.02□□□□□ -0.33
RBBP4-204ENST00000414241 SFXN4Q6P4A7 337 aa13.02□□□□□ -0.33
RBBP4-204ENST00000414241 KLHL24Q6TFL4 600 aa13.02□□□□□ -0.33
RBBP4-204ENST00000414241 METAP1DQ6UB28 335 aaPredicted RBP13.02□□□□□ -0.33
RBBP4-204ENST00000414241 CATSPERDQ86XM0 798 aa13.02□□□□□ -0.33
RBBP4-204ENST00000414241 SH3GL3Q99963 347 aa13.02□□□□□ -0.33
RBBP4-204ENST00000414241 CCDC32Q9BV29 185 aa13.02□□□□□ -0.33
RBBP4-204ENST00000414241 ULBP2Q9BZM5 246 aa13.02□□□□□ -0.33
RBBP4-204ENST00000414241 SLC6A15Q9H2J7 730 aa13.02□□□□□ -0.33
RBBP4-204ENST00000414241 NELFAQ9H3P2 528 aa13.02□□□□□ -0.33
RBBP4-204ENST00000414241 RNF122Q9H9V4 155 aa13.02□□□□□ -0.33
RBBP4-204ENST00000414241 CENPMQ9NSP4 180 aa13.02□□□□□ -0.33
RBBP4-204ENST00000414241 EMC3Q9P0I2 261 aa13.02□□□□□ -0.33
RBBP4-204ENST00000414241 GDF2Q9UK05 429 aaPredicted RBP13.02□□□□□ -0.33
RBBP4-204ENST00000414241 MCTS1Q9ULC4 181 aaKnown RBP13.02□□□□□ -0.33
RBBP4-204ENST00000414241 KCNMB2Q9Y691 235 aa13.02□□□□□ -0.33
RBBP4-204ENST00000414241 SRSF10O75494 262 aaKnown RBP13.01□□□□□ -0.33
RBBP4-204ENST00000414241 UPK1BO75841 260 aa13.01□□□□□ -0.33
RBBP4-204ENST00000414241 NCR1O76036 304 aa13.01□□□□□ -0.33
RBBP4-204ENST00000414241 ISG15P05161 165 aa13.01□□□□□ -0.33
RBBP4-204ENST00000414241 NPR2P20594 1047 aa13.01□□□□□ -0.33
RBBP4-204ENST00000414241 PTBP1P26599 531 aaKnown RBP eCLIP13.01□□□□□ -0.331e-8■■■■□ 23.6
RBBP4-204ENST00000414241 APEX1P27695 318 aaKnown RBP13.01□□□□□ -0.33
RBBP4-204ENST00000414241 KIR3DL2P43630 455 aa13.01□□□□□ -0.33
RBBP4-204ENST00000414241 MRPS34P82930 218 aaKnown RBP13.01□□□□□ -0.33
RBBP4-204ENST00000414241 IDNKQ5T6J7 187 aa13.01□□□□□ -0.33
RBBP4-204ENST00000414241 SPATC1Q76KD6 591 aa13.01□□□□□ -0.33
RBBP4-204ENST00000414241 BTLAQ7Z6A9 289 aa13.01□□□□□ -0.33
RBBP4-204ENST00000414241 LAX1Q8IWV1 398 aa13.01□□□□□ -0.33
RBBP4-204ENST00000414241 IL17RDQ8NFM7 739 aa13.01□□□□□ -0.33
RBBP4-204ENST00000414241 MIXL1Q9H2W2 232 aa13.01□□□□□ -0.33
RBBP4-204ENST00000414241 ZDHHC11Q9H8X9 412 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms