RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 DEFB129Q9H1M3 183 aa3.21□□□□□ -1.9
SF3B1-203ENST00000414174 REEP4Q9H6H4 257 aa3.21□□□□□ -1.9
SF3B1-203ENST00000414174 RPF2Q9H7B2 306 aaKnown RBP3.21□□□□□ -1.9
SF3B1-203ENST00000414174 MSL2Q9HCI7 577 aa3.21□□□□□ -1.9
SF3B1-203ENST00000414174 DNAJC4Q9NNZ3 241 aa3.21□□□□□ -1.9
SF3B1-203ENST00000414174 ISYNA1Q9NPH2 558 aa3.21□□□□□ -1.9
SF3B1-203ENST00000414174 ECHDC1Q9NTX5 307 aa3.21□□□□□ -1.9
SF3B1-203ENST00000414174 TMEM74BQ9NUR3 256 aa3.21□□□□□ -1.9
SF3B1-203ENST00000414174 JKAMPQ9P055 326 aa3.21□□□□□ -1.9
SF3B1-203ENST00000414174 IL17CQ9P0M4 197 aa3.21□□□□□ -1.9
SF3B1-203ENST00000414174 RCC2Q9P258 522 aaKnown RBP3.21□□□□□ -1.9
SF3B1-203ENST00000414174 NLKQ9UBE8 527 aa3.21□□□□□ -1.9
SF3B1-203ENST00000414174 VPS29Q9UBQ0 182 aa3.21□□□□□ -1.9
SF3B1-203ENST00000414174 FBXL4Q9UKA2 621 aa3.21□□□□□ -1.9
SF3B1-203ENST00000414174 ZFP30Q9Y2G7 519 aa3.21□□□□□ -1.9
SF3B1-203ENST00000414174 SIGLEC9Q9Y336 463 aa3.21□□□□□ -1.9
SF3B1-203ENST00000414174 RBM7Q9Y580 266 aaKnown RBP3.21□□□□□ -1.9
SF3B1-203ENST00000414174 TIMM10BQ9Y5J6 103 aa3.21□□□□□ -1.9
SF3B1-203ENST00000414174 FANCD2Q9BXW9 1451 aa3.21□□□□□ -1.9
SF3B1-203ENST00000414174 SPEF2Q9C093 1822 aa3.21□□□□□ -1.9
SF3B1-203ENST00000414174 ASTN1O14525 1302 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 TGIF2-C20orf24A0A0A6YYL0 155 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 A0A1B0GUS0 222 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 C20orf202A1L168 122 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 CDHR4A6H8M9 788 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 ANKUB1A6NFN9 424 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 ARL5CA6NH57 179 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 C3orf70A6NLC5 250 aaPredicted RBP3.2□□□□□ -1.9
SF3B1-203ENST00000414174 A8MWP6 167 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 ADM5C9JUS6 153 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 K7EN84 100 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 SIRPB1O00241 398 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 CASKO14936 926 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 ARPC1BO15143 372 aaKnown RBP3.2□□□□□ -1.9
SF3B1-203ENST00000414174 ITM2AO43736 263 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 PRKAB2O43741 272 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 SSNA1O43805 119 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 SPAG7O75391 227 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 CA11O75493 328 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 ANXA9O76027 345 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 VENTXO95231 258 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 SLC25A27O95847 323 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 TYMSP04818 313 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 SERPINA7P05543 415 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 RHOCP08134 193 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 DUX4L4P0CJ87 422 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 LIPCP11150 499 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 HOXB2P14652 356 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 ZNF250P15622 560 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 MAKP20794 623 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 MPZP25189 248 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 DUSP1P28562 367 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 CASP1P29466 404 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 SPRP35270 261 aaPredicted RBP3.2□□□□□ -1.9
SF3B1-203ENST00000414174 QARSP47897 775 aaKnown RBP3.2□□□□□ -1.9
SF3B1-203ENST00000414174 MEOX1P50221 254 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 LBX1P52954 281 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 PAX9P55771 341 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 CLDN12P56749 244 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 RHOAP61586 193 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 NTHL1P78549 312 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 SLC25A3Q00325 362 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 TIAL1Q01085 375 aaKnown RBP eCLIP3.2□□□□□ -1.92e-7■■■■■ 29
SF3B1-203ENST00000414174 RGS1Q08116 209 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 CD47Q08722 323 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 GAB1Q13480 694 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 C1orf61Q13536 156 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 TMEM132DQ14C87 1099 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 OR1Q1Q15612 314 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 ZNF77Q15935 545 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 ARHGAP11BQ3KRB8 267 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 TMEM128Q5BJH2 165 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 ACTL10Q5JWF8 245 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 CLLU1Q5K131 121 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 ELFN2Q5R3F8 820 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 C6orf141Q5SZD1 244 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 LYPLAL1Q5VWZ2 237 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 ANKRD22Q5VYY1 191 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 HIST2H2AA3Q6FI13 130 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 FAM166AQ6J272 317 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 RGMBQ6NW40 437 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 TAPT1Q6NXT6 567 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 CASP12Q6UXS9 341 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 ZNF517Q6ZMY9 492 aaPredicted RBP3.2□□□□□ -1.9
SF3B1-203ENST00000414174 RNF165Q6ZSG1 346 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 Q6ZSR3 168 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 TPRG1Q6ZUI0 275 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 BHLHA9Q7RTU4 235 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 MDGA2Q7Z553 956 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 IRF2BP2Q7Z5L9 587 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 BAP18Q8IXM2 172 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 CPNE9Q8IYJ1 553 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 C8orf59Q8N0T1 100 aaPredicted RBP3.2□□□□□ -1.9
SF3B1-203ENST00000414174 SLC39A11Q8N1S5 342 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 ATPAF2Q8N5M1 289 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 CLDN19Q8N6F1 224 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 PACRGLQ8N7B6 248 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 ZNF676Q8N7Q3 588 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 ARIH2OSQ8N7S6 290 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 PNLDC1Q8NA58 520 aaKnown RBP3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms