RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 SOCS5O75159 536 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 SIX3O95343 332 aaPredicted RBP4.24□□□□□ -1.73
PTPN13-202ENST00000411767 SEMA4FO95754 770 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 CDKN2AP42771 156 aaKnown RBP4.24□□□□□ -1.73
PTPN13-202ENST00000411767 KIR2DS4P43632 304 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 MTNR1AP48039 350 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 GNG4P50150 75 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 KIR2DS1Q14954 304 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 SOWAHAQ2M3V2 549 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 GAGE2EQ4V326 116 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 ZNF787Q6DD87 383 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 DEGS2Q6QHC5 323 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 TGIF2LYQ8IUE0 185 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 ZNF441Q8N8Z8 693 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 WFDC11Q8NEX6 87 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 LILRB4Q8NHJ6 448 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 WFIKKN2Q8TEU8 576 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 BRK1Q8WUW1 75 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 LRTOMTQ8WZ04 291 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 PTP4A1Q93096 173 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 OR2A14Q96R47 310 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 CDX2Q99626 313 aaPredicted RBP4.24□□□□□ -1.73
PTPN13-202ENST00000411767 RAB33BQ9H082 229 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 GAGE2DQ9UEU5 116 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 GSG1L2A8MUP6 293 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 C11orf98E9PRG8 122 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 H3BMM0 161 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 KLRC4-KLRK1H3BQV0 150 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 ARPC1BO15143 372 aaKnown RBP4.24□□□□□ -1.73
PTPN13-202ENST00000411767 SLC37A4O43826 429 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 PLAUP00749 431 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 HLA-DQA1P01909 254 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 MBPP02686 304 aaPredicted RBP4.24□□□□□ -1.73
PTPN13-202ENST00000411767 HOXB5P09067 269 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 PSMB6P28072 239 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 FAM3BP58499 235 aaPredicted RBP4.24□□□□□ -1.73
PTPN13-202ENST00000411767 JAG1P78504 1218 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 FOXO4P98177 505 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 SRSF4Q08170 494 aaKnown RBP4.24□□□□□ -1.73
PTPN13-202ENST00000411767 DSC1Q08554 894 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 MBTPS1Q14703 1052 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 EXOSC7Q15024 291 aaKnown RBP4.24□□□□□ -1.73
PTPN13-202ENST00000411767 KLHDC7AQ5VTJ3 777 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 FNDC7Q5VTL7 733 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 TMEM236Q5W0B7 351 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 NUFIP2Q7Z417 695 aaKnown RBP4.24□□□□□ -1.73
PTPN13-202ENST00000411767 SPRED1Q7Z699 444 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 GLB1L2Q8IW92 636 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 ANKRD29Q8N6D5 301 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 NECAP1Q8NC96 275 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 RLN3Q8WXF3 142 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 TMBIM1Q969X1 311 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 UBE2WQ96B02 151 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 CHST8Q9H2A9 424 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 GMPR2Q9P2T1 348 aaKnown RBP4.24□□□□□ -1.73
PTPN13-202ENST00000411767 DEC1Q9P2X7 70 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 NUP153P49790 1475 aaKnown RBP4.23□□□□□ -1.73
PTPN13-202ENST00000411767 CD109Q6YHK3 1445 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 CPDO75976 1380 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 TMEM82A0PJX8 343 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 DPRXA6NFQ7 191 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 H3BRM9 83 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 SOX15O60248 233 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 DDAH2O95865 285 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 GSRP00390 522 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 GYPAP02724 150 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 CD38P28907 300 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 LIPAP38571 399 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 TNFSF10P50591 281 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 MTPNP58546 118 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 NRG1Q02297 640 aaPredicted RBP4.23□□□□□ -1.73
PTPN13-202ENST00000411767 GUCA2AQ02747 115 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 TROAPQ12815 778 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 TECRLQ5HYJ1 363 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 ASPHD2Q6ICH7 369 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 NPSR1Q6W5P4 371 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 MDP1Q86V88 176 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 FAM219AQ8IW50 185 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 C8orf58Q8NAV2 365 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 LINC00116Q8NCU8 138 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 ZNF502Q8TBZ5 544 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 TRAF4Q9BUZ4 470 aaPredicted RBP4.23□□□□□ -1.73
PTPN13-202ENST00000411767 NXF2Q9GZY0 626 aaKnown RBP4.23□□□□□ -1.73
PTPN13-202ENST00000411767 CYSLTR2Q9NS75 346 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 SIRT3Q9NTG7 399 aaPredicted RBP4.23□□□□□ -1.73
PTPN13-202ENST00000411767 WNT16Q9UBV4 365 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 DNMT1P26358 1616 aaKnown RBP4.23□□□□□ -1.73
PTPN13-202ENST00000411767 FLT4P35916 1363 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 TRAV8-4A0A0B4J246 113 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 TRAV34A0A0B4J273 112 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 HS3ST1O14792 307 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 NDUFS4O43181 175 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 LYPLA2O95372 231 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 KLKB1P03952 638 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 NME1P15531 152 aaKnown RBP4.23□□□□□ -1.73
PTPN13-202ENST00000411767 CELP19835 753 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 GALR1P47211 349 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 RARRES1P49788 294 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 PKIAP61925 76 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 ALX1Q15699 326 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms