RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 GOLGA8RI6L899 631 aa3.93□□□□□ -1.78
LSM5-206ENST00000409987 PLPP1O14494 284 aa3.93□□□□□ -1.78
LSM5-206ENST00000409987 PRMT5O14744 637 aaPredicted RBP3.93□□□□□ -1.78
LSM5-206ENST00000409987 PLEKHA8P1O95397 391 aa3.93□□□□□ -1.78
LSM5-206ENST00000409987 HBE1P02100 147 aa3.93□□□□□ -1.78
LSM5-206ENST00000409987 GLAP06280 429 aa3.93□□□□□ -1.78
LSM5-206ENST00000409987 KLK3P07288 261 aaPredicted RBP3.93□□□□□ -1.78
LSM5-206ENST00000409987 RBMY1CP0DJD4 496 aa3.93□□□□□ -1.78
LSM5-206ENST00000409987 PSMC3P17980 439 aa3.93□□□□□ -1.78
LSM5-206ENST00000409987 PSMB6P28072 239 aa3.93□□□□□ -1.78
LSM5-206ENST00000409987 CD40LGP29965 261 aa3.93□□□□□ -1.78
LSM5-206ENST00000409987 SHMT2P34897 504 aa3.93□□□□□ -1.78
LSM5-206ENST00000409987 P2RY2P41231 377 aa3.93□□□□□ -1.78
LSM5-206ENST00000409987 BIDP55957 195 aa3.93□□□□□ -1.78
LSM5-206ENST00000409987 CLDN6P56747 220 aa3.93□□□□□ -1.78
LSM5-206ENST00000409987 MYL6P60660 151 aa3.93□□□□□ -1.78
LSM5-206ENST00000409987 TNXAQ16473 311 aa3.93□□□□□ -1.78
LSM5-206ENST00000409987 NSUN5P1Q3KNT7 163 aa3.93□□□□□ -1.78
LSM5-206ENST00000409987 TCTEX1D4Q5JR98 221 aa3.93□□□□□ -1.78
LSM5-206ENST00000409987 PAGE2BQ5JRK9 111 aa3.93□□□□□ -1.78
LSM5-206ENST00000409987 EOGTQ5NDL2 527 aa3.93□□□□□ -1.78
LSM5-206ENST00000409987 VAX1Q5SQQ9 334 aa3.93□□□□□ -1.78
LSM5-206ENST00000409987 ADNP2Q6IQ32 1131 aa3.93□□□□□ -1.78
LSM5-206ENST00000409987 UFSP1Q6NVU6 142 aa3.93□□□□□ -1.78
LSM5-206ENST00000409987 ZNF600Q6ZNG1 722 aa3.93□□□□□ -1.78
LSM5-206ENST00000409987 LHFPL3Q86UP9 236 aa3.93□□□□□ -1.78
LSM5-206ENST00000409987 C9orf40Q8IXQ3 194 aa3.93□□□□□ -1.78
LSM5-206ENST00000409987 FTMTQ8N4E7 242 aa3.93□□□□□ -1.78
LSM5-206ENST00000409987 CYB561A3Q8NBI2 242 aa3.93□□□□□ -1.78
LSM5-206ENST00000409987 NOXO1Q8NFA2 376 aa3.93□□□□□ -1.78
LSM5-206ENST00000409987 OR6N2Q8NGY6 317 aa3.93□□□□□ -1.78
LSM5-206ENST00000409987 OR2L2Q8NH16 312 aa3.93□□□□□ -1.78
LSM5-206ENST00000409987 ZNF564Q8TBZ8 553 aaPredicted RBP3.93□□□□□ -1.78
LSM5-206ENST00000409987 ACER1Q8TDN7 264 aa3.93□□□□□ -1.78
LSM5-206ENST00000409987 FAM222BQ8WU58 562 aa3.93□□□□□ -1.78
LSM5-206ENST00000409987 TFB1MQ8WVM0 346 aaKnown RBP3.93□□□□□ -1.78
LSM5-206ENST00000409987 BAALCQ8WXS3 180 aa3.93□□□□□ -1.78
LSM5-206ENST00000409987 SMARCD2Q92925 531 aa3.93□□□□□ -1.78
LSM5-206ENST00000409987 DUS3LQ96G46 650 aaKnown RBP3.93□□□□□ -1.78
LSM5-206ENST00000409987 C1orf147Q96MC9 270 aaPredicted RBP3.93□□□□□ -1.78
LSM5-206ENST00000409987 RANBP9Q96S59 729 aa3.93□□□□□ -1.78
LSM5-206ENST00000409987 KLHDC3Q9BQ90 382 aa3.93□□□□□ -1.78
LSM5-206ENST00000409987 PELOQ9BRX2 385 aaKnown RBP3.93□□□□□ -1.78
LSM5-206ENST00000409987 OSBPL10Q9BXB5 764 aa3.93□□□□□ -1.78
LSM5-206ENST00000409987 UBXN6Q9BZV1 441 aa3.93□□□□□ -1.78
LSM5-206ENST00000409987 ACTR6Q9GZN1 396 aa3.93□□□□□ -1.78
LSM5-206ENST00000409987 NAA50Q9GZZ1 169 aaKnown RBP3.93□□□□□ -1.78
LSM5-206ENST00000409987 SYT4Q9H2B2 425 aa3.93□□□□□ -1.78
LSM5-206ENST00000409987 SIAEQ9HAT2 523 aa3.93□□□□□ -1.78
LSM5-206ENST00000409987 CLN6Q9NWW5 311 aa3.93□□□□□ -1.78
LSM5-206ENST00000409987 SLC17A7Q9P2U7 560 aa3.93□□□□□ -1.78
LSM5-206ENST00000409987 MMP17Q9ULZ9 603 aa3.93□□□□□ -1.78
LSM5-206ENST00000409987 ING4Q9UNL4 249 aa3.93□□□□□ -1.78
LSM5-206ENST00000409987 CSAG2Q9Y5P2 127 aa3.93□□□□□ -1.78
LSM5-206ENST00000409987 V9GYY9 64 aa3.93□□□□□ -1.78
LSM5-206ENST00000409987 ABCC3O15438 1527 aa3.93□□□□□ -1.78
LSM5-206ENST00000409987 KIDINS220Q9ULH0 1771 aa3.93□□□□□ -1.78
LSM5-206ENST00000409987 SETD5Q9C0A6 1442 aa3.93□□□□□ -1.78
LSM5-206ENST00000409987 SHPRHQ149N8 1683 aa3.93□□□□□ -1.78
LSM5-206ENST00000409987 GAKO14976 1311 aa3.93□□□□□ -1.78
LSM5-206ENST00000409987 SBNO1A3KN83 1393 aa3.92□□□□□ -1.78
LSM5-206ENST00000409987 PRDM15P57071 1507 aaPredicted RBP3.92□□□□□ -1.78
LSM5-206ENST00000409987 ZC3H13Q5T200 1668 aaKnown RBP3.92□□□□□ -1.78
LSM5-206ENST00000409987 GLYATL1P3A0A0U1RQE8 302 aa3.92□□□□□ -1.78
LSM5-206ENST00000409987 LYRM9A8MSI8 78 aa3.92□□□□□ -1.78
LSM5-206ENST00000409987 FAM220BPB1ANY3 271 aa3.92□□□□□ -1.78
LSM5-206ENST00000409987 SLC9A3R1O14745 358 aaPredicted RBP3.92□□□□□ -1.78
LSM5-206ENST00000409987 ZNF354AO60765 605 aaPredicted RBP3.92□□□□□ -1.78
LSM5-206ENST00000409987 ZMPSTE24O75844 475 aa3.92□□□□□ -1.78
LSM5-206ENST00000409987 SLC2A10O95528 541 aa3.92□□□□□ -1.78
LSM5-206ENST00000409987 TACSTD2P09758 323 aa3.92□□□□□ -1.78
LSM5-206ENST00000409987 PNMA6AP0CW24 399 aaPredicted RBP3.92□□□□□ -1.78
LSM5-206ENST00000409987 GCKP35557 465 aa3.92□□□□□ -1.78
LSM5-206ENST00000409987 RFC3P40938 356 aa3.92□□□□□ -1.78
LSM5-206ENST00000409987 AQP2P41181 271 aa3.92□□□□□ -1.78
LSM5-206ENST00000409987 OR2B6P58173 313 aa3.92□□□□□ -1.78
LSM5-206ENST00000409987 SLAMF1Q13291 335 aa3.92□□□□□ -1.78
LSM5-206ENST00000409987 PSMD5Q16401 504 aa3.92□□□□□ -1.78
LSM5-206ENST00000409987 LCE1FQ5T754 118 aa3.92□□□□□ -1.78
LSM5-206ENST00000409987 PLCZ1Q86YW0 608 aa3.92□□□□□ -1.78
LSM5-206ENST00000409987 NELFCDQ8IXH7 590 aa3.92□□□□□ -1.78
LSM5-206ENST00000409987 ZNF557Q8N988 423 aaPredicted RBP3.92□□□□□ -1.78
LSM5-206ENST00000409987 ZNF565Q8N9K5 539 aa3.92□□□□□ -1.78
LSM5-206ENST00000409987 SNX31Q8N9S9 440 aa3.92□□□□□ -1.78
LSM5-206ENST00000409987 ZNF740Q8NDX6 193 aa3.92□□□□□ -1.78
LSM5-206ENST00000409987 ITFG1Q8TB96 612 aa3.92□□□□□ -1.78
LSM5-206ENST00000409987 C17orf50Q8WW18 174 aa3.92□□□□□ -1.78
LSM5-206ENST00000409987 CDKL2Q92772 493 aa3.92□□□□□ -1.78
LSM5-206ENST00000409987 UPF3BQ9BZI7 483 aaKnown RBP3.92□□□□□ -1.78
LSM5-206ENST00000409987 ULBP2Q9BZM5 246 aa3.92□□□□□ -1.78
LSM5-206ENST00000409987 EML4Q9HC35 981 aaKnown RBP3.92□□□□□ -1.78
LSM5-206ENST00000409987 NECAP2Q9NVZ3 263 aa3.92□□□□□ -1.78
LSM5-206ENST00000409987 MCUBQ9NWR8 336 aa3.92□□□□□ -1.78
LSM5-206ENST00000409987 NKIRAS1Q9NYS0 192 aa3.92□□□□□ -1.78
LSM5-206ENST00000409987 CLEC2DQ9UHP7 191 aa3.92□□□□□ -1.78
LSM5-206ENST00000409987 GOLT1BQ9Y3E0 138 aa3.92□□□□□ -1.78
LSM5-206ENST00000409987 CBY1Q9Y3M2 126 aa3.92□□□□□ -1.78
LSM5-206ENST00000409987 RTEL1-TNFRSF6BF6WH68 1400 aa3.92□□□□□ -1.78
LSM5-206ENST00000409987 ATRNO75882 1429 aa3.92□□□□□ -1.78
LSM5-206ENST00000409987 NCOA3Q9Y6Q9 1424 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms