RNA–Protein interactions for RNA: ENST00000409881.1

MINDY4-202, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 2,488 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-202ENST00000409881 HMGN1P05114 100 aa12.87□□□□□ -0.35
MINDY4-202ENST00000409881 HNRNPCL4P0DMR1 293 aa12.87□□□□□ -0.35
MINDY4-202ENST00000409881 CALCRP30988 508 aa12.87□□□□□ -0.35
MINDY4-202ENST00000409881 PYCR1P32322 319 aa12.87□□□□□ -0.35
MINDY4-202ENST00000409881 MAPK14Q16539 360 aa12.87□□□□□ -0.35
MINDY4-202ENST00000409881 PRAMEF8Q5VWM4 474 aa12.87□□□□□ -0.35
MINDY4-202ENST00000409881 PRAMEF7Q5VXH5 474 aa12.87□□□□□ -0.35
MINDY4-202ENST00000409881 HIST3H2AQ7L7L0 130 aa12.87□□□□□ -0.35
MINDY4-202ENST00000409881 ZNF619Q8N2I2 560 aa12.87□□□□□ -0.35
MINDY4-202ENST00000409881 ACOT11Q8WXI4 607 aaPredicted RBP12.87□□□□□ -0.35
MINDY4-202ENST00000409881 HIST1H2ACQ93077 130 aa12.87□□□□□ -0.35
MINDY4-202ENST00000409881 DERL3Q96Q80 235 aa12.87□□□□□ -0.35
MINDY4-202ENST00000409881 RASL10BQ96S79 203 aa12.87□□□□□ -0.35
MINDY4-202ENST00000409881 GINS4Q9BRT9 223 aa12.87□□□□□ -0.35
MINDY4-202ENST00000409881 OR2A4O95047 310 aa12.86□□□□□ -0.35
MINDY4-202ENST00000409881 PSMD4P55036 377 aaKnown RBP12.86□□□□□ -0.35
MINDY4-202ENST00000409881 TRAM1Q15629 374 aa12.86□□□□□ -0.35
MINDY4-202ENST00000409881 C2orf68Q2NKX9 166 aa12.86□□□□□ -0.35
MINDY4-202ENST00000409881 PDSS1Q5T2R2 415 aa12.86□□□□□ -0.35
MINDY4-202ENST00000409881 ZNF660Q6AZW8 331 aaPredicted RBP12.86□□□□□ -0.35
MINDY4-202ENST00000409881 JMJD6Q6NYC1 403 aaPredicted RBP12.86□□□□□ -0.35
MINDY4-202ENST00000409881 OR6V1Q8N148 313 aa12.86□□□□□ -0.35
MINDY4-202ENST00000409881 OR5M1Q8NGP8 315 aa12.86□□□□□ -0.35
MINDY4-202ENST00000409881 THEM6Q8WUY1 208 aa12.86□□□□□ -0.35
MINDY4-202ENST00000409881 KISS1RQ969F8 398 aaPredicted RBP12.86□□□□□ -0.35
MINDY4-202ENST00000409881 ORAI1Q96D31 301 aa12.86□□□□□ -0.35
MINDY4-202ENST00000409881 OR2A7Q96R45 310 aa12.86□□□□□ -0.35
MINDY4-202ENST00000409881 FRYQ5TBA9 3013 aa12.86□□□□□ -0.35
MINDY4-202ENST00000409881 ABCD4O14678 606 aa12.86□□□□□ -0.35
MINDY4-202ENST00000409881 CTDSPLO15194 276 aa12.86□□□□□ -0.35
MINDY4-202ENST00000409881 KLF4O43474 513 aa12.86□□□□□ -0.35
MINDY4-202ENST00000409881 CLUP10909 449 aa12.86□□□□□ -0.35
MINDY4-202ENST00000409881 CPN1P15169 458 aa12.86□□□□□ -0.35
MINDY4-202ENST00000409881 MLF1P58340 268 aa12.86□□□□□ -0.35
MINDY4-202ENST00000409881 UBE2MP61081 183 aaKnown RBP12.86□□□□□ -0.35
MINDY4-202ENST00000409881 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.86□□□□□ -0.35
MINDY4-202ENST00000409881 CDH26Q8IXH8 852 aa12.86□□□□□ -0.35
MINDY4-202ENST00000409881 GALNT16Q8N428 558 aa12.86□□□□□ -0.35
MINDY4-202ENST00000409881 ZNF614Q8N883 585 aa12.86□□□□□ -0.35
MINDY4-202ENST00000409881 OR5M9Q8NGP3 310 aa12.86□□□□□ -0.35
MINDY4-202ENST00000409881 PSMF1Q92530 271 aa12.86□□□□□ -0.35
MINDY4-202ENST00000409881 MTHFD2LQ9H903 347 aaPredicted RBP12.86□□□□□ -0.35
MINDY4-202ENST00000409881 CACYBPQ9HB71 228 aaKnown RBP12.86□□□□□ -0.35
MINDY4-202ENST00000409881 POLE3Q9NRF9 147 aa12.86□□□□□ -0.35
MINDY4-202ENST00000409881 FLRT3Q9NZU0 649 aa12.86□□□□□ -0.35
MINDY4-202ENST00000409881 IGF2RP11717 2491 aa12.86□□□□□ -0.35
MINDY4-202ENST00000409881 CENPVL1A0A0U1RR11 272 aa12.85□□□□□ -0.35
MINDY4-202ENST00000409881 RLN2P04090 185 aa12.85□□□□□ -0.35
MINDY4-202ENST00000409881 FBXW4P57775 412 aa12.85□□□□□ -0.35
MINDY4-202ENST00000409881 ERVK-25P63136 954 aa12.85□□□□□ -0.35
MINDY4-202ENST00000409881 HES5Q5TA89 166 aa12.85□□□□□ -0.35
MINDY4-202ENST00000409881 ZNF626Q68DY1 528 aa12.85□□□□□ -0.35
MINDY4-202ENST00000409881 ZNF613Q6PF04 617 aa12.85□□□□□ -0.35
MINDY4-202ENST00000409881 UNQ6494/PRO21346Q6UXR6 183 aa12.85□□□□□ -0.35
MINDY4-202ENST00000409881 SSX6Q7RTT6 188 aa12.85□□□□□ -0.35
MINDY4-202ENST00000409881 GDF7Q7Z4P5 450 aa12.85□□□□□ -0.35
MINDY4-202ENST00000409881 EIF4E3Q8N5X7 224 aaKnown RBP12.85□□□□□ -0.35
MINDY4-202ENST00000409881 ARHGDIGQ99819 225 aa12.85□□□□□ -0.35
MINDY4-202ENST00000409881 TAS2R5Q9NYW4 299 aa12.85□□□□□ -0.35
MINDY4-202ENST00000409881 MED11Q9P086 117 aa12.85□□□□□ -0.35
MINDY4-202ENST00000409881 TSPAN2O60636 221 aa12.85□□□□□ -0.35
MINDY4-202ENST00000409881 UCHL1P09936 223 aa12.85□□□□□ -0.35
MINDY4-202ENST00000409881 PRG2P13727 222 aa12.85□□□□□ -0.35
MINDY4-202ENST00000409881 SSR4P51571 173 aa12.85□□□□□ -0.35
MINDY4-202ENST00000409881 RGS8P57771 180 aaPredicted RBP12.85□□□□□ -0.35
MINDY4-202ENST00000409881 ZNF85Q03923 595 aa12.85□□□□□ -0.35
MINDY4-202ENST00000409881 PABPC1L2AQ5JQF8 200 aa12.85□□□□□ -0.35
MINDY4-202ENST00000409881 UBE2NLQ5JXB2 153 aa12.85□□□□□ -0.35
MINDY4-202ENST00000409881 ACER2Q5QJU3 275 aa12.85□□□□□ -0.35
MINDY4-202ENST00000409881 DMKNQ6E0U4 476 aaPredicted RBP12.85□□□□□ -0.35
MINDY4-202ENST00000409881 H3F3CQ6NXT2 135 aa12.85□□□□□ -0.35
MINDY4-202ENST00000409881 BAIAP2L2Q6UXY1 529 aa12.85□□□□□ -0.35
MINDY4-202ENST00000409881 LRRC69Q6ZNQ3 347 aa12.85□□□□□ -0.35
MINDY4-202ENST00000409881 MBOAT2Q6ZWT7 520 aa12.85□□□□□ -0.35
MINDY4-202ENST00000409881 RFLNBQ8N5W9 214 aa12.85□□□□□ -0.35
MINDY4-202ENST00000409881 SLC41A3Q96GZ6 507 aa12.85□□□□□ -0.35
MINDY4-202ENST00000409881 MCHR1Q99705 422 aa12.85□□□□□ -0.35
MINDY4-202ENST00000409881 OR52D1Q9H346 318 aa12.85□□□□□ -0.35
MINDY4-202ENST00000409881 URB1O60287 2271 aaKnown RBP12.84□□□□□ -0.35
MINDY4-202ENST00000409881 ICOSLGO75144 302 aa12.84□□□□□ -0.35
MINDY4-202ENST00000409881 KRT33AO76009 404 aa12.84□□□□□ -0.35
MINDY4-202ENST00000409881 UTS2O95399 124 aa12.84□□□□□ -0.35
MINDY4-202ENST00000409881 ZNF35P13682 527 aa12.84□□□□□ -0.35
MINDY4-202ENST00000409881 CD53P19397 219 aa12.84□□□□□ -0.35
MINDY4-202ENST00000409881 MST1P26927 711 aa12.84□□□□□ -0.35
MINDY4-202ENST00000409881 DCTDP32321 178 aa12.84□□□□□ -0.35
MINDY4-202ENST00000409881 CCL11P51671 97 aa12.84□□□□□ -0.35
MINDY4-202ENST00000409881 HCCSP53701 268 aa12.84□□□□□ -0.35
MINDY4-202ENST00000409881 H2BFSP57053 126 aa12.84□□□□□ -0.35
MINDY4-202ENST00000409881 GPR85P60893 370 aa12.84□□□□□ -0.35
MINDY4-202ENST00000409881 TLE3Q04726 772 aa12.84□□□□□ -0.35
MINDY4-202ENST00000409881 ELFN2Q5R3F8 820 aa12.84□□□□□ -0.35
MINDY4-202ENST00000409881 TMEM156Q8N614 296 aa12.84□□□□□ -0.35
MINDY4-202ENST00000409881 NKX6-2Q9C056 277 aaPredicted RBP12.84□□□□□ -0.35
MINDY4-202ENST00000409881 GPN1Q9HCN4 374 aaPredicted RBP12.84□□□□□ -0.35
MINDY4-202ENST00000409881 OPN4Q9UHM6 478 aa12.84□□□□□ -0.35
MINDY4-202ENST00000409881 KCNE5Q9UJ90 142 aa12.84□□□□□ -0.35
MINDY4-202ENST00000409881 TRAV1-2A0A0B4J238 106 aa12.84□□□□□ -0.35
MINDY4-202ENST00000409881 FMO6PO60774 539 aa12.84□□□□□ -0.35
MINDY4-202ENST00000409881 ECDO95905 644 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms