RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 CCDC80Q76M96 950 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 CPEB2Q7Z5Q1 589 aaKnown RBP3.59□□□□□ -1.83
CLK1-203ENST00000409769 ANKRD37Q7Z713 158 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 PRSS58Q8IYP2 241 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 MICU2Q8IYU8 434 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 FAM89BQ8N5H3 189 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 RNF148Q8N7C7 305 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 ZNF321PQ8N8H1 164 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 MORN4Q8NDC4 146 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 OR52R1Q8NGF1 315 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 OR5D16Q8NGK9 328 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 OR2Y1Q8NGV0 311 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 VANGL1Q8TAA9 524 aaPredicted RBP3.59□□□□□ -1.83
CLK1-203ENST00000409769 PNPT1Q8TCS8 783 aaKnown RBP3.59□□□□□ -1.83
CLK1-203ENST00000409769 DOK4Q8TEW6 326 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 RIT1Q92963 219 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 ADIPOR1Q96A54 375 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 MCUR1Q96AQ8 359 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 OTUB1Q96FW1 271 aaPredicted RBP3.59□□□□□ -1.83
CLK1-203ENST00000409769 DUS3LQ96G46 650 aaKnown RBP3.59□□□□□ -1.83
CLK1-203ENST00000409769 C16orf58Q96GQ5 468 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 RBM18Q96H35 190 aaKnown RBP3.59□□□□□ -1.83
CLK1-203ENST00000409769 SLC35G5Q96KT7 338 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 IMMP1LQ96LU5 166 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 OR7D2Q96RA2 312 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 STACQ99469 402 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 LPAR4Q99677 370 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 KCTD14Q9BQ13 255 aaPredicted RBP3.59□□□□□ -1.83
CLK1-203ENST00000409769 ECSITQ9BQ95 431 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 THUMPD3Q9BV44 507 aaKnown RBP3.59□□□□□ -1.83
CLK1-203ENST00000409769 PRRG4Q9BZD6 226 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 OR51I1Q9H343 314 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 PIGUQ9H490 435 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 TMEM38AQ9H6F2 299 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 GORASP2Q9H8Y8 452 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 FOLH1BQ9HBA9 442 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 C3orf14Q9HBI5 128 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 PNO1Q9NRX1 252 aaKnown RBP3.59□□□□□ -1.83
CLK1-203ENST00000409769 ZCCHC3Q9NUD5 404 aaKnown RBP3.59□□□□□ -1.83
CLK1-203ENST00000409769 DDX18Q9NVP1 670 aaKnown RBP3.59□□□□□ -1.83
CLK1-203ENST00000409769 THUMPD1Q9NXG2 353 aaKnown RBP3.59□□□□□ -1.83
CLK1-203ENST00000409769 ADA2Q9NZK5 511 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 ACTR3BQ9P1U1 418 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 C3orf18Q9UK00 162 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 ZNF223Q9UK11 482 aaPredicted RBP3.59□□□□□ -1.83
CLK1-203ENST00000409769 ERVK-19Q9WJR5 959 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 RRP15Q9Y3B9 282 aaKnown RBP3.59□□□□□ -1.83
CLK1-203ENST00000409769 L3MBTL1Q9Y468 752 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 KCNE3Q9Y6H6 103 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 SPTBN4Q9H254 2564 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 DSPPQ9NZW4 1301 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 MPDZO75970 2070 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 CFAP54Q96N23 3096 aa3.58□□□□□ -1.84
CLK1-203ENST00000409769 URB1O60287 2271 aaKnown RBP3.58□□□□□ -1.84
CLK1-203ENST00000409769 IGHV1-45A0A0A0MS14 117 aa3.58□□□□□ -1.84
CLK1-203ENST00000409769 IGHV3-20A0A0C4DH32 117 aa3.58□□□□□ -1.84
CLK1-203ENST00000409769 A8MUI8 341 aa3.58□□□□□ -1.84
CLK1-203ENST00000409769 MPTX1A8MV57 137 aa3.58□□□□□ -1.84
CLK1-203ENST00000409769 MGRN1O60291 552 aa3.58□□□□□ -1.84
CLK1-203ENST00000409769 CEACAM4O75871 244 aa3.58□□□□□ -1.84
CLK1-203ENST00000409769 IGHEP01854 428 aa3.58□□□□□ -1.84
CLK1-203ENST00000409769 SEMG1P04279 462 aa3.58□□□□□ -1.84
CLK1-203ENST00000409769 IFNA16P05015 189 aa3.58□□□□□ -1.84
CLK1-203ENST00000409769 HEXBP07686 556 aa3.58□□□□□ -1.84
CLK1-203ENST00000409769 CT45A8P0DMV1 189 aa3.58□□□□□ -1.84
CLK1-203ENST00000409769 CT45A9P0DMV2 189 aa3.58□□□□□ -1.84
CLK1-203ENST00000409769 OR12D1P0DN82 309 aa3.58□□□□□ -1.84
CLK1-203ENST00000409769 LIPCP11150 499 aa3.58□□□□□ -1.84
CLK1-203ENST00000409769 NCK1P16333 377 aa3.58□□□□□ -1.84
CLK1-203ENST00000409769 TCN1P20061 433 aaPredicted RBP3.58□□□□□ -1.84
CLK1-203ENST00000409769 TCN2P20062 427 aa3.58□□□□□ -1.84
CLK1-203ENST00000409769 RPS4Y1P22090 263 aaKnown RBP3.58□□□□□ -1.84
CLK1-203ENST00000409769 MMP11P24347 488 aa3.58□□□□□ -1.84
CLK1-203ENST00000409769 RBMS1P29558 406 aaKnown RBP3.58□□□□□ -1.84
CLK1-203ENST00000409769 DLSTP36957 453 aa3.58□□□□□ -1.84
CLK1-203ENST00000409769 CRATP43155 626 aa3.58□□□□□ -1.84
CLK1-203ENST00000409769 KHKP50053 298 aa3.58□□□□□ -1.84
CLK1-203ENST00000409769 CASP9P55211 416 aa3.58□□□□□ -1.84
CLK1-203ENST00000409769 SLC26A5P58743 744 aa3.58□□□□□ -1.84
CLK1-203ENST00000409769 ELF3P78545 371 aaPredicted RBP3.58□□□□□ -1.84
CLK1-203ENST00000409769 CDK6Q00534 326 aa3.58□□□□□ -1.84
CLK1-203ENST00000409769 SCARB2Q14108 478 aa3.58□□□□□ -1.84
CLK1-203ENST00000409769 FLOT2Q14254 428 aa3.58□□□□□ -1.84
CLK1-203ENST00000409769 EBPQ15125 230 aaKnown RBP3.58□□□□□ -1.84
CLK1-203ENST00000409769 EXT1Q16394 746 aa3.58□□□□□ -1.84
CLK1-203ENST00000409769 DUSP5Q16690 384 aa3.58□□□□□ -1.84
CLK1-203ENST00000409769 CYP51A1Q16850 503 aa3.58□□□□□ -1.84
CLK1-203ENST00000409769 ZNF630Q2M218 657 aaPredicted RBP3.58□□□□□ -1.84
CLK1-203ENST00000409769 ARHGAP11BQ3KRB8 267 aa3.58□□□□□ -1.84
CLK1-203ENST00000409769 SFT2D3Q587I9 215 aa3.58□□□□□ -1.84
CLK1-203ENST00000409769 CT45A2Q5DJT8 189 aa3.58□□□□□ -1.84
CLK1-203ENST00000409769 C1orf146Q5VVC0 180 aa3.58□□□□□ -1.84
CLK1-203ENST00000409769 PRAMEF8Q5VWM4 474 aa3.58□□□□□ -1.84
CLK1-203ENST00000409769 PRAMEF7Q5VXH5 474 aa3.58□□□□□ -1.84
CLK1-203ENST00000409769 GLYATQ6IB77 296 aa3.58□□□□□ -1.84
CLK1-203ENST00000409769 SPINK14Q6IE38 97 aa3.58□□□□□ -1.84
CLK1-203ENST00000409769 NPSR1Q6W5P4 371 aa3.58□□□□□ -1.84
CLK1-203ENST00000409769 SHISA6Q6ZSJ9 500 aa3.58□□□□□ -1.84
CLK1-203ENST00000409769 IFNEQ86WN2 208 aa3.58□□□□□ -1.84
CLK1-203ENST00000409769 AQP12AQ8IXF9 295 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms