RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 CD200R1LQ6Q8B3 271 aa11.17□□□□□ -0.62
CHRNA1-205ENST00000409542 DTX2Q86UW9 622 aa11.17□□□□□ -0.62
CHRNA1-205ENST00000409542 ARIH2OSQ8N7S6 290 aa11.17□□□□□ -0.62
CHRNA1-205ENST00000409542 OR10H5Q8NGA6 315 aa11.17□□□□□ -0.62
CHRNA1-205ENST00000409542 OR52N1Q8NH53 320 aa11.17□□□□□ -0.62
CHRNA1-205ENST00000409542 GPR151Q8TDV0 419 aa11.17□□□□□ -0.62
CHRNA1-205ENST00000409542 TMEM239Q8WW34 195 aa11.17□□□□□ -0.62
CHRNA1-205ENST00000409542 HTRA1Q92743 480 aa11.17□□□□□ -0.62
CHRNA1-205ENST00000409542 SLC35B4Q969S0 331 aa11.17□□□□□ -0.62
CHRNA1-205ENST00000409542 SLC25A46Q96AG3 418 aa11.17□□□□□ -0.62
CHRNA1-205ENST00000409542 CEP19Q96LK0 163 aa11.17□□□□□ -0.62
CHRNA1-205ENST00000409542 COQ7Q99807 217 aa11.17□□□□□ -0.62
CHRNA1-205ENST00000409542 HDHD5Q9BXW7 423 aa11.17□□□□□ -0.62
CHRNA1-205ENST00000409542 ESRP2Q9H6T0 727 aaKnown RBP11.17□□□□□ -0.62
CHRNA1-205ENST00000409542 Q9N2J8 555 aa11.17□□□□□ -0.62
CHRNA1-205ENST00000409542 TXNL4BQ9NX01 149 aaKnown RBP11.17□□□□□ -0.62
CHRNA1-205ENST00000409542 CISD1Q9NZ45 108 aaKnown RBP11.17□□□□□ -0.62
CHRNA1-205ENST00000409542 KCNE5Q9UJ90 142 aa11.17□□□□□ -0.62
CHRNA1-205ENST00000409542 CARD8Q9Y2G2 431 aa11.17□□□□□ -0.62
CHRNA1-205ENST00000409542 SF3B6Q9Y3B4 125 aaKnown RBP11.17□□□□□ -0.62
CHRNA1-205ENST00000409542 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.16□□□□□ -0.62
CHRNA1-205ENST00000409542 ZNF814B7Z6K7 855 aa11.16□□□□□ -0.62
CHRNA1-205ENST00000409542 CTDSP2O14595 271 aa11.16□□□□□ -0.62
CHRNA1-205ENST00000409542 CDC42EP2O14613 210 aa11.16□□□□□ -0.62
CHRNA1-205ENST00000409542 PRG2P13727 222 aa11.16□□□□□ -0.62
CHRNA1-205ENST00000409542 EDNRAP25101 427 aa11.16□□□□□ -0.62
CHRNA1-205ENST00000409542 FGF9P31371 208 aaPredicted RBP11.16□□□□□ -0.62
CHRNA1-205ENST00000409542 TNFSF8P32971 234 aa11.16□□□□□ -0.62
CHRNA1-205ENST00000409542 SFTPDP35247 375 aa11.16□□□□□ -0.62
CHRNA1-205ENST00000409542 SLC1A3P43003 542 aa11.16□□□□□ -0.62
CHRNA1-205ENST00000409542 ESPNLQ6ZVH7 1005 aa11.16□□□□□ -0.62
CHRNA1-205ENST00000409542 TMPRSS11FQ6ZWK6 438 aa11.16□□□□□ -0.62
CHRNA1-205ENST00000409542 CADM3Q8N126 398 aa11.16□□□□□ -0.62
CHRNA1-205ENST00000409542 SLC43A2Q8N370 569 aa11.16□□□□□ -0.62
CHRNA1-205ENST00000409542 POC5Q8NA72 575 aa11.16□□□□□ -0.62
CHRNA1-205ENST00000409542 FANK1Q8TC84 345 aa11.16□□□□□ -0.62
CHRNA1-205ENST00000409542 RNF128Q8TEB7 428 aa11.16□□□□□ -0.62
CHRNA1-205ENST00000409542 HSD17B8Q92506 261 aa11.16□□□□□ -0.62
CHRNA1-205ENST00000409542 SAMD8Q96LT4 415 aa11.16□□□□□ -0.62
CHRNA1-205ENST00000409542 HS6ST2Q96MM7 605 aa11.16□□□□□ -0.62
CHRNA1-205ENST00000409542 KCTD7Q96MP8 289 aa11.16□□□□□ -0.62
CHRNA1-205ENST00000409542 KCNS3Q9BQ31 491 aa11.16□□□□□ -0.62
CHRNA1-205ENST00000409542 C19orf24Q9BVV8 132 aa11.16□□□□□ -0.62
CHRNA1-205ENST00000409542 FANCFQ9NPI8 374 aa11.16□□□□□ -0.62
CHRNA1-205ENST00000409542 PAQR5Q9NXK6 330 aaPredicted RBP11.16□□□□□ -0.62
CHRNA1-205ENST00000409542 ZNF229Q9UJW7 825 aa11.16□□□□□ -0.62
CHRNA1-205ENST00000409542 ALG1L2C9J202 215 aa11.15□□□□□ -0.62
CHRNA1-205ENST00000409542 IL32P24001 234 aa11.15□□□□□ -0.62
CHRNA1-205ENST00000409542 RBM34P42696 430 aaKnown RBP11.15□□□□□ -0.62
CHRNA1-205ENST00000409542 SLC9A3P48764 834 aa11.15□□□□□ -0.62
CHRNA1-205ENST00000409542 CARD18P57730 90 aa11.15□□□□□ -0.62
CHRNA1-205ENST00000409542 RPS25P62851 125 aaKnown RBP11.15□□□□□ -0.62
CHRNA1-205ENST00000409542 BDH1Q02338 343 aa11.15□□□□□ -0.62
CHRNA1-205ENST00000409542 ZNF239Q16600 458 aaKnown RBP11.15□□□□□ -0.62
CHRNA1-205ENST00000409542 OR2G6Q5TZ20 316 aa11.15□□□□□ -0.62
CHRNA1-205ENST00000409542 WDR88Q6ZMY6 472 aa11.15□□□□□ -0.62
CHRNA1-205ENST00000409542 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.15□□□□□ -0.62
CHRNA1-205ENST00000409542 CDK20Q8IZL9 346 aa11.15□□□□□ -0.62
CHRNA1-205ENST00000409542 KLHL36Q8N4N3 616 aa11.15□□□□□ -0.62
CHRNA1-205ENST00000409542 OR52L1Q8NGH7 329 aa11.15□□□□□ -0.62
CHRNA1-205ENST00000409542 SETD6Q8TBK2 473 aa11.15□□□□□ -0.62
CHRNA1-205ENST00000409542 ZNF524Q96C55 264 aa11.15□□□□□ -0.62
CHRNA1-205ENST00000409542 KLHL15Q96M94 604 aa11.15□□□□□ -0.62
CHRNA1-205ENST00000409542 TNFRSF13CQ96RJ3 184 aa11.15□□□□□ -0.62
CHRNA1-205ENST00000409542 KCNK17Q96T54 332 aa11.15□□□□□ -0.62
CHRNA1-205ENST00000409542 SDHCQ99643 169 aaPredicted RBP11.15□□□□□ -0.62
CHRNA1-205ENST00000409542 OR52D1Q9H346 318 aa11.15□□□□□ -0.62
CHRNA1-205ENST00000409542 TMEM27Q9HBJ8 222 aa11.15□□□□□ -0.62
CHRNA1-205ENST00000409542 POLE4Q9NR33 117 aa11.15□□□□□ -0.62
CHRNA1-205ENST00000409542 SNTG1Q9NSN8 517 aa11.15□□□□□ -0.62
CHRNA1-205ENST00000409542 NPAP1Q9NZP6 1156 aa11.15□□□□□ -0.62
CHRNA1-205ENST00000409542 H2AFY2Q9P0M6 372 aaPredicted RBP11.15□□□□□ -0.62
CHRNA1-205ENST00000409542 PRSS50Q9UI38 385 aa11.15□□□□□ -0.62
CHRNA1-205ENST00000409542 CDC42EP3Q9UKI2 254 aa11.15□□□□□ -0.62
CHRNA1-205ENST00000409542 CMAHPQ9Y471 501 aa11.15□□□□□ -0.62
CHRNA1-205ENST00000409542 MALRD1Q5VYJ5 2156 aa11.14□□□□□ -0.63
CHRNA1-205ENST00000409542 A0A087WZY1 265 aa11.14□□□□□ -0.63
CHRNA1-205ENST00000409542 IGHV3-15A0A0B4J1V0 119 aa11.14□□□□□ -0.63
CHRNA1-205ENST00000409542 TRDV1A0A1B0GX56 115 aa11.14□□□□□ -0.63
CHRNA1-205ENST00000409542 TTC36A6NLP5 189 aa11.14□□□□□ -0.63
CHRNA1-205ENST00000409542 J3QRE1 110 aa11.14□□□□□ -0.63
CHRNA1-205ENST00000409542 BHLHE40O14503 412 aa11.14□□□□□ -0.63
CHRNA1-205ENST00000409542 NDUFB5O43674 189 aa11.14□□□□□ -0.63
CHRNA1-205ENST00000409542 AKAP8O43823 692 aaKnown RBP11.14□□□□□ -0.63
CHRNA1-205ENST00000409542 KCNK2O95069 426 aa11.14□□□□□ -0.63
CHRNA1-205ENST00000409542 CDRT1O95170 752 aa11.14□□□□□ -0.63
CHRNA1-205ENST00000409542 GKN3PP0CG01 181 aa11.14□□□□□ -0.63
CHRNA1-205ENST00000409542 IFI30P13284 250 aa11.14□□□□□ -0.63
CHRNA1-205ENST00000409542 MAKP20794 623 aa11.14□□□□□ -0.63
CHRNA1-205ENST00000409542 GALP22466 123 aa11.14□□□□□ -0.63
CHRNA1-205ENST00000409542 GTF2E2P29084 291 aaKnown RBP11.14□□□□□ -0.63
CHRNA1-205ENST00000409542 PLAURQ03405 335 aa11.14□□□□□ -0.63
CHRNA1-205ENST00000409542 ZNHIT3Q15649 155 aaPredicted RBP11.14□□□□□ -0.63
CHRNA1-205ENST00000409542 C11orf71Q6IPW1 123 aa11.14□□□□□ -0.63
CHRNA1-205ENST00000409542 TMPRSS11AQ6ZMR5 421 aa11.14□□□□□ -0.63
CHRNA1-205ENST00000409542 IL17RELQ6ZVW7 336 aa11.14□□□□□ -0.63
CHRNA1-205ENST00000409542 BHLHA15Q7RTS1 189 aaPredicted RBP11.14□□□□□ -0.63
CHRNA1-205ENST00000409542 LNX2Q8N448 690 aa11.14□□□□□ -0.63
CHRNA1-205ENST00000409542 CHAC2Q8WUX2 184 aa11.14□□□□□ -0.63
CHRNA1-205ENST00000409542 GATAD2BQ8WXI9 593 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms