RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 MDFIC2A0A1B0GVS7 189 aa16.16■□□□□ 0.18
SMPD4-202ENST00000409031 H3BML4 177 aa16.16■□□□□ 0.18
SMPD4-202ENST00000409031 CASRP41180 1078 aa16.16■□□□□ 0.18
SMPD4-202ENST00000409031 EGR3Q06889 387 aa16.16■□□□□ 0.18
SMPD4-202ENST00000409031 HAGHQ16775 308 aa16.16■□□□□ 0.18
SMPD4-202ENST00000409031 CBLN2Q8IUK8 224 aa16.16■□□□□ 0.18
SMPD4-202ENST00000409031 FAM185AQ8N0U4 392 aa16.16■□□□□ 0.18
SMPD4-202ENST00000409031 ABI3Q9P2A4 366 aa16.16■□□□□ 0.18
SMPD4-202ENST00000409031 ANKRD20A5PA0PJZ0 165 aa16.16■□□□□ 0.18
SMPD4-202ENST00000409031 KLF8O95600 359 aaPredicted RBP16.16■□□□□ 0.18
SMPD4-202ENST00000409031 IGLV3-27P01718 113 aa16.16■□□□□ 0.18
SMPD4-202ENST00000409031 SCAND1P57086 179 aa16.16■□□□□ 0.18
SMPD4-202ENST00000409031 ETFDHQ16134 617 aa16.16■□□□□ 0.18
SMPD4-202ENST00000409031 CST9LP1Q5W188 147 aa16.16■□□□□ 0.18
SMPD4-202ENST00000409031 TSACCQ96A04 125 aaPredicted RBP16.16■□□□□ 0.18
SMPD4-202ENST00000409031 SAT2Q96F10 170 aaPredicted RBP16.16■□□□□ 0.18
SMPD4-202ENST00000409031 LOC105371267A0A1B0GV96 52 aa16.15■□□□□ 0.18
SMPD4-202ENST00000409031 BTBD17A6NE02 478 aa16.15■□□□□ 0.18
SMPD4-202ENST00000409031 IGHG1P01857 330 aa16.15■□□□□ 0.18
SMPD4-202ENST00000409031 DPP4P27487 766 aa16.15■□□□□ 0.18
SMPD4-202ENST00000409031 OR1D4P47884 311 aa16.15■□□□□ 0.18
SMPD4-202ENST00000409031 PGFP49763 221 aa16.15■□□□□ 0.18
SMPD4-202ENST00000409031 ATP1B3P54709 279 aa16.15■□□□□ 0.18
SMPD4-202ENST00000409031 TMEM128Q5BJH2 165 aa16.15■□□□□ 0.18
SMPD4-202ENST00000409031 GPR137CQ8N3F9 429 aa16.15■□□□□ 0.18
SMPD4-202ENST00000409031 TMEM217Q8N7C4 229 aa16.15■□□□□ 0.18
SMPD4-202ENST00000409031 MARCH1Q8TCQ1 289 aa16.15■□□□□ 0.18
SMPD4-202ENST00000409031 THAP3Q8WTV1 239 aaPredicted RBP16.15■□□□□ 0.18
SMPD4-202ENST00000409031 KLHDC7BQ96G42 594 aa16.15■□□□□ 0.18
SMPD4-202ENST00000409031 DEFB126Q9BYW3 111 aa16.15■□□□□ 0.18
SMPD4-202ENST00000409031 NXF5Q9H1B4 397 aaKnown RBP16.15■□□□□ 0.18
SMPD4-202ENST00000409031 SLC2A4RGQ9NR83 387 aa16.15■□□□□ 0.18
SMPD4-202ENST00000409031 A0A1W2PR48 441 aa16.15■□□□□ 0.18
SMPD4-202ENST00000409031 SLC17A2O00624 439 aa16.15■□□□□ 0.18
SMPD4-202ENST00000409031 CST4P01036 141 aa16.15■□□□□ 0.18
SMPD4-202ENST00000409031 HNRNPA1P09651 372 aaKnown RBP eCLIP16.15■□□□□ 0.18
SMPD4-202ENST00000409031 MSMO1Q15800 293 aa16.15■□□□□ 0.18
SMPD4-202ENST00000409031 MOGAT2Q3SYC2 334 aa16.15■□□□□ 0.18
SMPD4-202ENST00000409031 ALKBH2Q6NS38 261 aa16.15■□□□□ 0.18
SMPD4-202ENST00000409031 MAMSTRQ6ZN01 415 aa16.15■□□□□ 0.18
SMPD4-202ENST00000409031 ZNF687Q8N1G0 1237 aa16.15■□□□□ 0.18
SMPD4-202ENST00000409031 GPR32P1Q8NGA4 272 aa16.15■□□□□ 0.18
SMPD4-202ENST00000409031 SEC11CQ9BY50 192 aa16.15■□□□□ 0.18
SMPD4-202ENST00000409031 TMPRSS13Q9BYE2 586 aa16.15■□□□□ 0.18
SMPD4-202ENST00000409031 C19orf53Q9UNZ5 99 aaPredicted RBP16.15■□□□□ 0.18
SMPD4-202ENST00000409031 CTNSO60931 367 aa16.15■□□□□ 0.18
SMPD4-202ENST00000409031 CRYBA1P05813 215 aa16.15■□□□□ 0.18
SMPD4-202ENST00000409031 ADRA2CP18825 462 aa16.15■□□□□ 0.18
SMPD4-202ENST00000409031 ITGB8P26012 769 aa16.15■□□□□ 0.18
SMPD4-202ENST00000409031 AVPR2P30518 371 aa16.15■□□□□ 0.18
SMPD4-202ENST00000409031 DHRS2Q13268 280 aa16.15■□□□□ 0.18
SMPD4-202ENST00000409031 EMC4Q5J8M3 183 aa16.15■□□□□ 0.18
SMPD4-202ENST00000409031 PRR22Q8IZ63 422 aa16.15■□□□□ 0.18
SMPD4-202ENST00000409031 FAM24BQ8N5W8 94 aa16.15■□□□□ 0.18
SMPD4-202ENST00000409031 ZDHHC22Q8N966 263 aa16.15■□□□□ 0.18
SMPD4-202ENST00000409031 TVP23CQ96ET8 276 aa16.15■□□□□ 0.18
SMPD4-202ENST00000409031 SLC17A5Q9NRA2 495 aa16.15■□□□□ 0.18
SMPD4-202ENST00000409031 C9J4A7 227 aa16.14■□□□□ 0.18
SMPD4-202ENST00000409031 MAN2B1O00754 1011 aa16.14■□□□□ 0.18
SMPD4-202ENST00000409031 FZD6O60353 706 aa16.14■□□□□ 0.18
SMPD4-202ENST00000409031 NKX2-1P43699 371 aaPredicted RBP16.14■□□□□ 0.18
SMPD4-202ENST00000409031 PCBP3P57721 371 aaKnown RBP16.14■□□□□ 0.18
SMPD4-202ENST00000409031 RPP30P78346 268 aaKnown RBP16.14■□□□□ 0.18
SMPD4-202ENST00000409031 C4orf17Q53FE4 359 aa16.14■□□□□ 0.18
SMPD4-202ENST00000409031 TEX19Q8NA77 164 aa16.14■□□□□ 0.18
SMPD4-202ENST00000409031 OR9A4Q8NGU2 314 aa16.14■□□□□ 0.18
SMPD4-202ENST00000409031 ORAI1Q96D31 301 aa16.14■□□□□ 0.18
SMPD4-202ENST00000409031 NKX2-4Q9H2Z4 354 aa16.14■□□□□ 0.18
SMPD4-202ENST00000409031 GHITMQ9H3K2 345 aa16.14■□□□□ 0.18
SMPD4-202ENST00000409031 C20orf202A1L168 122 aa16.14■□□□□ 0.17
SMPD4-202ENST00000409031 SEC14L6B5MCN3 397 aa16.14■□□□□ 0.17
SMPD4-202ENST00000409031 TGM5O43548 720 aa16.14■□□□□ 0.17
SMPD4-202ENST00000409031 FCGR2AP12318 317 aa16.14■□□□□ 0.17
SMPD4-202ENST00000409031 BSGP35613 385 aa16.14■□□□□ 0.17
SMPD4-202ENST00000409031 SLC25A30Q5SVS4 291 aa16.14■□□□□ 0.17
SMPD4-202ENST00000409031 ATPAF1Q5TC12 328 aaPredicted RBP16.14■□□□□ 0.17
SMPD4-202ENST00000409031 FAM57BQ71RH2 274 aa16.14■□□□□ 0.17
SMPD4-202ENST00000409031 OR2G2Q8NGZ5 317 aa16.14■□□□□ 0.17
SMPD4-202ENST00000409031 CD99L2Q8TCZ2 262 aa16.14■□□□□ 0.17
SMPD4-202ENST00000409031 BORCS7Q96B45 105 aa16.14■□□□□ 0.17
SMPD4-202ENST00000409031 TMEM68Q96MH6 324 aa16.14■□□□□ 0.17
SMPD4-202ENST00000409031 SLC46A1Q96NT5 459 aa16.14■□□□□ 0.17
SMPD4-202ENST00000409031 APOOQ9BUR5 198 aa16.14■□□□□ 0.17
SMPD4-202ENST00000409031 SERTAD4Q9NUC0 356 aa16.14■□□□□ 0.17
SMPD4-202ENST00000409031 SUSD2Q9UGT4 822 aa16.14■□□□□ 0.17
SMPD4-202ENST00000409031 RCBTB1Q8NDN9 531 aa16.14■□□□□ 0.17
SMPD4-202ENST00000409031 ZFPM2Q8WW38 1151 aa16.14■□□□□ 0.17
SMPD4-202ENST00000409031 TSSK2Q96PF2 358 aa16.14■□□□□ 0.17
SMPD4-202ENST00000409031 TRHRP34981 398 aaPredicted RBP16.14■□□□□ 0.17
SMPD4-202ENST00000409031 HRH1P35367 487 aa16.14■□□□□ 0.17
SMPD4-202ENST00000409031 BCL6P41182 706 aa16.14■□□□□ 0.17
SMPD4-202ENST00000409031 RAB38P57729 211 aa16.14■□□□□ 0.17
SMPD4-202ENST00000409031 SEMA6DQ8NFY4 1073 aa16.14■□□□□ 0.17
SMPD4-202ENST00000409031 GCM1Q9NP62 436 aa16.14■□□□□ 0.17
SMPD4-202ENST00000409031 NECAP2Q9NVZ3 263 aa16.14■□□□□ 0.17
SMPD4-202ENST00000409031 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.13■□□□□ 0.17
SMPD4-202ENST00000409031 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.13■□□□□ 0.17
SMPD4-202ENST00000409031 ZNF727A8MUV8 499 aa16.13■□□□□ 0.17
SMPD4-202ENST00000409031 PDGFBP01127 241 aaPredicted RBP16.13■□□□□ 0.17
SMPD4-202ENST00000409031 MSR1P21757 451 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms