RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 VN1R1Q9GZP7 353 aa8.82□□□□□ -1
MSH2-202ENST00000406134 KLK13Q9UKR3 277 aa8.82□□□□□ -1
MSH2-202ENST00000406134 SPAG17Q6Q759 2223 aa8.82□□□□□ -1
MSH2-202ENST00000406134 TMED7-TICAM2A0A0A6YYA0 188 aa8.82□□□□□ -1
MSH2-202ENST00000406134 LOC100289279A0A1B0GTE1 492 aa8.82□□□□□ -1
MSH2-202ENST00000406134 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.82□□□□□ -1
MSH2-202ENST00000406134 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.82□□□□□ -1
MSH2-202ENST00000406134 TMEM150CB9EJG8 249 aa8.82□□□□□ -1
MSH2-202ENST00000406134 M0R233 179 aa8.82□□□□□ -1
MSH2-202ENST00000406134 SLC16A7O60669 478 aa8.82□□□□□ -1
MSH2-202ENST00000406134 FCER2P06734 321 aa8.82□□□□□ -1
MSH2-202ENST00000406134 M6PRP20645 277 aa8.82□□□□□ -1
MSH2-202ENST00000406134 BLKP51451 505 aa8.82□□□□□ -1
MSH2-202ENST00000406134 QRFPP83859 136 aa8.82□□□□□ -1
MSH2-202ENST00000406134 TMPRSS9Q7Z410 1059 aa8.82□□□□□ -1
MSH2-202ENST00000406134 KDM8Q8N371 416 aa8.82□□□□□ -1
MSH2-202ENST00000406134 PAQR4Q8N4S7 273 aaPredicted RBP8.82□□□□□ -1
MSH2-202ENST00000406134 SLC26A10Q8NG04 563 aa8.82□□□□□ -1
MSH2-202ENST00000406134 OR1N1Q8NGS0 311 aa8.82□□□□□ -1
MSH2-202ENST00000406134 SLC38A3Q99624 504 aa8.82□□□□□ -1
MSH2-202ENST00000406134 EDEM2Q9BV94 578 aa8.82□□□□□ -1
MSH2-202ENST00000406134 ZNF230Q9UIE0 474 aaPredicted RBP8.82□□□□□ -1
MSH2-202ENST00000406134 KIF25Q9UIL4 384 aa8.82□□□□□ -1
MSH2-202ENST00000406134 TMED7Q9Y3B3 224 aa8.82□□□□□ -1
MSH2-202ENST00000406134 EFNA2O43921 213 aa8.81□□□□□ -1
MSH2-202ENST00000406134 IFNA7P01567 189 aa8.81□□□□□ -1
MSH2-202ENST00000406134 MYF5P13349 255 aa8.81□□□□□ -1
MSH2-202ENST00000406134 ZNF35P13682 527 aa8.81□□□□□ -1
MSH2-202ENST00000406134 GABRA1P14867 456 aa8.81□□□□□ -1
MSH2-202ENST00000406134 NFYAP23511 347 aaPredicted RBP8.81□□□□□ -1
MSH2-202ENST00000406134 DLX5P56178 289 aa8.81□□□□□ -1
MSH2-202ENST00000406134 OR1D5P58170 312 aa8.81□□□□□ -1
MSH2-202ENST00000406134 PSMA6P60900 246 aaKnown RBP8.81□□□□□ -1
MSH2-202ENST00000406134 RAP2BP61225 183 aa8.81□□□□□ -1
MSH2-202ENST00000406134 SKP1P63208 163 aa8.81□□□□□ -1
MSH2-202ENST00000406134 OR2AK2Q8NG84 335 aa8.81□□□□□ -1
MSH2-202ENST00000406134 OR10S1Q8NGN2 331 aa8.81□□□□□ -1
MSH2-202ENST00000406134 OR13C8Q8NGS7 320 aa8.81□□□□□ -1
MSH2-202ENST00000406134 DACT3Q96B18 629 aaPredicted RBP8.81□□□□□ -1
MSH2-202ENST00000406134 LINC00052Q96N35 136 aa8.81□□□□□ -1
MSH2-202ENST00000406134 ZNF587Q96SQ5 575 aaPredicted RBP8.81□□□□□ -1
MSH2-202ENST00000406134 SLC17A5Q9NRA2 495 aa8.81□□□□□ -1
MSH2-202ENST00000406134 SOHLH2Q9NX45 425 aa8.81□□□□□ -1
MSH2-202ENST00000406134 CGGBP1Q9UFW8 167 aaPredicted RBP8.81□□□□□ -1
MSH2-202ENST00000406134 KCNN3Q9UGI6 736 aa8.81□□□□□ -1
MSH2-202ENST00000406134 HMSDA8MTL9 139 aa8.81□□□□□ -1
MSH2-202ENST00000406134 EIF4E2O60573 245 aaKnown RBP8.81□□□□□ -1
MSH2-202ENST00000406134 SDC3O75056 442 aa8.81□□□□□ -1
MSH2-202ENST00000406134 MT-ATP6P00846 226 aa8.81□□□□□ -1
MSH2-202ENST00000406134 MPGP29372 298 aa8.81□□□□□ -1
MSH2-202ENST00000406134 BIKQ13323 160 aa8.81□□□□□ -1
MSH2-202ENST00000406134 ELOCQ15369 112 aa8.81□□□□□ -1
MSH2-202ENST00000406134 TOMM20Q15388 145 aa8.81□□□□□ -1
MSH2-202ENST00000406134 C1orf140Q5VVS0 124 aa8.81□□□□□ -1
MSH2-202ENST00000406134 B3GNTL1Q67FW5 361 aaPredicted RBP8.81□□□□□ -1
MSH2-202ENST00000406134 ASB10Q8WXI3 467 aa8.81□□□□□ -1
MSH2-202ENST00000406134 ARL5BQ96KC2 179 aa8.81□□□□□ -1
MSH2-202ENST00000406134 COMMD4Q9H0A8 199 aa8.81□□□□□ -1
MSH2-202ENST00000406134 FN3KRPQ9HA64 309 aa8.81□□□□□ -1
MSH2-202ENST00000406134 APMAPQ9HDC9 416 aa8.81□□□□□ -1
MSH2-202ENST00000406134 TRAV18A0A075B6X5 111 aa8.81□□□□□ -1
MSH2-202ENST00000406134 PHYHO14832 338 aa8.81□□□□□ -1
MSH2-202ENST00000406134 SEC61A1P61619 476 aaKnown RBP8.81□□□□□ -1
MSH2-202ENST00000406134 APCDD1LQ8NCL9 501 aa8.81□□□□□ -1
MSH2-202ENST00000406134 OR4D6Q8NGJ1 314 aa8.81□□□□□ -1
MSH2-202ENST00000406134 OR52N5Q8NH56 324 aa8.81□□□□□ -1
MSH2-202ENST00000406134 SLC25A36Q96CQ1 311 aa8.81□□□□□ -1
MSH2-202ENST00000406134 KCNK17Q96T54 332 aa8.81□□□□□ -1
MSH2-202ENST00000406134 WDR13Q9H1Z4 485 aa8.81□□□□□ -1
MSH2-202ENST00000406134 KLHL13Q9P2N7 655 aa8.81□□□□□ -1
MSH2-202ENST00000406134 CTSFQ9UBX1 484 aa8.81□□□□□ -1
MSH2-202ENST00000406134 COA3Q9Y2R0 106 aaPredicted RBP8.81□□□□□ -1
MSH2-202ENST00000406134 TMEM14AQ9Y6G1 99 aa8.81□□□□□ -1
MSH2-202ENST00000406134 RALGAPA1Q6GYQ0 2036 aa8.81□□□□□ -1
MSH2-202ENST00000406134 IGHV1OR21-1A0A087WYE8 117 aa8.8□□□□□ -1
MSH2-202ENST00000406134 A0A1B0GTI1 187 aa8.8□□□□□ -1
MSH2-202ENST00000406134 I3L521 148 aa8.8□□□□□ -1
MSH2-202ENST00000406134 CD74P04233 296 aa8.8□□□□□ -1
MSH2-202ENST00000406134 ISG15P05161 165 aa8.8□□□□□ -1
MSH2-202ENST00000406134 LPLP06858 475 aa8.8□□□□□ -1
MSH2-202ENST00000406134 HOXD4P09016 255 aaPredicted RBP8.8□□□□□ -1
MSH2-202ENST00000406134 CSF1P09603 554 aa8.8□□□□□ -1
MSH2-202ENST00000406134 FOSL2P15408 326 aa8.8□□□□□ -1
MSH2-202ENST00000406134 HPGDP15428 266 aa8.8□□□□□ -1
MSH2-202ENST00000406134 POLR2HP52434 150 aaKnown RBP8.8□□□□□ -1
MSH2-202ENST00000406134 UNC119Q13432 240 aa8.8□□□□□ -1
MSH2-202ENST00000406134 ZNF660Q6AZW8 331 aaPredicted RBP8.8□□□□□ -1
MSH2-202ENST00000406134 CHMP1BQ7LBR1 199 aa8.8□□□□□ -1
MSH2-202ENST00000406134 GABRG1Q8N1C3 465 aa8.8□□□□□ -1
MSH2-202ENST00000406134 D2HGDHQ8N465 521 aa8.8□□□□□ -1
MSH2-202ENST00000406134 OR1S1Q8NH92 325 aa8.8□□□□□ -1
MSH2-202ENST00000406134 TINAGL1Q9GZM7 467 aaPredicted RBP8.8□□□□□ -1
MSH2-202ENST00000406134 SLITRK2Q9H156 845 aa8.8□□□□□ -1
MSH2-202ENST00000406134 NCKAP5O14513 1909 aa8.8□□□□□ -1
MSH2-202ENST00000406134 COL27A1Q8IZC6 1860 aaPredicted RBP8.8□□□□□ -1
MSH2-202ENST00000406134 TEX51A0A1B0GUA7 166 aa8.8□□□□□ -1
MSH2-202ENST00000406134 OR14I1A6ND48 311 aa8.8□□□□□ -1
MSH2-202ENST00000406134 TUBAL3A6NHL2 446 aa8.8□□□□□ -1
MSH2-202ENST00000406134 LMO7DNF2Z398 122 aa8.8□□□□□ -1
MSH2-202ENST00000406134 TRIM77I1YAP6 450 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms