RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 DSCAMO60469 2012 aa9.22□□□□□ -0.93
RPAIN-204ENST00000405578 OR6C68A6NDL8 312 aa9.21□□□□□ -0.94
RPAIN-204ENST00000405578 TRIM64A6NGJ6 449 aa9.21□□□□□ -0.94
RPAIN-204ENST00000405578 TRIM64BA6NI03 449 aa9.21□□□□□ -0.94
RPAIN-204ENST00000405578 C12orf71A8MTZ7 269 aa9.21□□□□□ -0.94
RPAIN-204ENST00000405578 CRLF1O75462 422 aa9.21□□□□□ -0.94
RPAIN-204ENST00000405578 SEC14L2O76054 403 aa9.21□□□□□ -0.94
RPAIN-204ENST00000405578 RAB36O95755 333 aa9.21□□□□□ -0.94
RPAIN-204ENST00000405578 CD79AP11912 226 aa9.21□□□□□ -0.94
RPAIN-204ENST00000405578 MSR1P21757 451 aa9.21□□□□□ -0.94
RPAIN-204ENST00000405578 PEX2P28328 305 aa9.21□□□□□ -0.94
RPAIN-204ENST00000405578 ARR3P36575 388 aa9.21□□□□□ -0.94
RPAIN-204ENST00000405578 NR1H2P55055 460 aa9.21□□□□□ -0.94
RPAIN-204ENST00000405578 FOXG1P55316 489 aaPredicted RBP9.21□□□□□ -0.94
RPAIN-204ENST00000405578 ZIK1Q3SY52 487 aaPredicted RBP9.21□□□□□ -0.94
RPAIN-204ENST00000405578 OGFRL1Q5TC84 451 aaPredicted RBP9.21□□□□□ -0.94
RPAIN-204ENST00000405578 FAM27BQ5VT28 67 aa9.21□□□□□ -0.94
RPAIN-204ENST00000405578 LPCAT4Q643R3 524 aa9.21□□□□□ -0.94
RPAIN-204ENST00000405578 TMEM108Q6UXF1 575 aa9.21□□□□□ -0.94
RPAIN-204ENST00000405578 ZBTB46Q86UZ6 589 aa9.21□□□□□ -0.94
RPAIN-204ENST00000405578 TRUB1Q8WWH5 349 aaKnown RBP9.21□□□□□ -0.94
RPAIN-204ENST00000405578 DOCK7Q96N67 2140 aa9.21□□□□□ -0.94
RPAIN-204ENST00000405578 SLC29A1Q99808 456 aa9.21□□□□□ -0.94
RPAIN-204ENST00000405578 CDADC1Q9BWV3 514 aa9.21□□□□□ -0.94
RPAIN-204ENST00000405578 FN3KQ9H479 309 aa9.21□□□□□ -0.94
RPAIN-204ENST00000405578 TOR3AQ9H497 397 aa9.21□□□□□ -0.94
RPAIN-204ENST00000405578 ESRP2Q9H6T0 727 aaKnown RBP9.21□□□□□ -0.94
RPAIN-204ENST00000405578 RNF121Q9H920 327 aa9.21□□□□□ -0.94
RPAIN-204ENST00000405578 CCNB1IP1Q9NPC3 277 aa9.21□□□□□ -0.94
RPAIN-204ENST00000405578 MOKQ9UQ07 419 aa9.21□□□□□ -0.94
RPAIN-204ENST00000405578 COA3Q9Y2R0 106 aaPredicted RBP9.21□□□□□ -0.94
RPAIN-204ENST00000405578 POLR1DQ9Y2S0 133 aa9.21□□□□□ -0.94
RPAIN-204ENST00000405578 A0A1W2PPR1 153 aa9.2□□□□□ -0.94
RPAIN-204ENST00000405578 SNTNA6NMZ2 147 aa9.2□□□□□ -0.94
RPAIN-204ENST00000405578 PRODHO43272 600 aa9.2□□□□□ -0.94
RPAIN-204ENST00000405578 TLX2O43763 284 aaPredicted RBP9.2□□□□□ -0.94
RPAIN-204ENST00000405578 MPZL2O60487 215 aa9.2□□□□□ -0.94
RPAIN-204ENST00000405578 SMPD2O60906 423 aa9.2□□□□□ -0.94
RPAIN-204ENST00000405578 TMCC2O75069 709 aa9.2□□□□□ -0.94
RPAIN-204ENST00000405578 ATP6V1G2O95670 118 aa9.2□□□□□ -0.94
RPAIN-204ENST00000405578 PTHP01270 115 aa9.2□□□□□ -0.94
RPAIN-204ENST00000405578 CST2P09228 141 aa9.2□□□□□ -0.94
RPAIN-204ENST00000405578 ZNF823P16415 610 aa9.2□□□□□ -0.94
RPAIN-204ENST00000405578 SPI1P17947 270 aa9.2□□□□□ -0.94
RPAIN-204ENST00000405578 CRYGSP22914 178 aa9.2□□□□□ -0.94
RPAIN-204ENST00000405578 FMO3P31513 532 aa9.2□□□□□ -0.94
RPAIN-204ENST00000405578 CDAP32320 146 aa9.2□□□□□ -0.94
RPAIN-204ENST00000405578 PTDSS1P48651 473 aaKnown RBP9.2□□□□□ -0.94
RPAIN-204ENST00000405578 RPS7P62081 194 aaKnown RBP9.2□□□□□ -0.94
RPAIN-204ENST00000405578 LSM6P62312 80 aaKnown RBP9.2□□□□□ -0.94
RPAIN-204ENST00000405578 PLP2Q04941 152 aa9.2□□□□□ -0.94
RPAIN-204ENST00000405578 GSG1Q2KHT4 349 aa9.2□□□□□ -0.94
RPAIN-204ENST00000405578 KLHL12Q53G59 568 aa9.2□□□□□ -0.94
RPAIN-204ENST00000405578 BEX5Q5H9J7 111 aa9.2□□□□□ -0.94
RPAIN-204ENST00000405578 LCN1P1Q5VSP4 162 aa9.2□□□□□ -0.94
RPAIN-204ENST00000405578 TTC23Q5W5X9 447 aa9.2□□□□□ -0.94
RPAIN-204ENST00000405578 PLBD1Q6P4A8 553 aa9.2□□□□□ -0.94
RPAIN-204ENST00000405578 ALDH16A1Q8IZ83 802 aa9.2□□□□□ -0.94
RPAIN-204ENST00000405578 OR6V1Q8N148 313 aa9.2□□□□□ -0.94
RPAIN-204ENST00000405578 LRRC18Q8N456 261 aa9.2□□□□□ -0.94
RPAIN-204ENST00000405578 FAM169BQ8N8A8 192 aa9.2□□□□□ -0.94
RPAIN-204ENST00000405578 OR8J1Q8NGP2 316 aa9.2□□□□□ -0.94
RPAIN-204ENST00000405578 OR9Q1Q8NGQ5 310 aa9.2□□□□□ -0.94
RPAIN-204ENST00000405578 OR6K6Q8NGW6 343 aa9.2□□□□□ -0.94
RPAIN-204ENST00000405578 FAM81AQ8TBF8 368 aa9.2□□□□□ -0.94
RPAIN-204ENST00000405578 RFKQ969G6 155 aa9.2□□□□□ -0.94
RPAIN-204ENST00000405578 HRASLS5Q96KN8 279 aa9.2□□□□□ -0.94
RPAIN-204ENST00000405578 TSSK2Q96PF2 358 aa9.2□□□□□ -0.94
RPAIN-204ENST00000405578 APOL4Q9BPW4 351 aa9.2□□□□□ -0.94
RPAIN-204ENST00000405578 KCNS3Q9BQ31 491 aa9.2□□□□□ -0.94
RPAIN-204ENST00000405578 GRIP2Q9C0E4 1043 aa9.2□□□□□ -0.94
RPAIN-204ENST00000405578 OR51V1Q9H2C8 321 aa9.2□□□□□ -0.94
RPAIN-204ENST00000405578 POLE4Q9NR33 117 aa9.2□□□□□ -0.94
RPAIN-204ENST00000405578 NKX1-2Q9UD57 310 aaPredicted RBP9.2□□□□□ -0.94
RPAIN-204ENST00000405578 KCNG2Q9UJ96 466 aa9.2□□□□□ -0.94
RPAIN-204ENST00000405578 UGT2A1Q9Y4X1 527 aa9.2□□□□□ -0.94
RPAIN-204ENST00000405578 TIMM10BQ9Y5J6 103 aa9.2□□□□□ -0.94
RPAIN-204ENST00000405578 GMPPBQ9Y5P6 360 aa9.2□□□□□ -0.94
RPAIN-204ENST00000405578 SLC25A15Q9Y619 301 aa9.2□□□□□ -0.94
RPAIN-204ENST00000405578 IGLV1-36A0A0B4J1U3 117 aa9.19□□□□□ -0.94
RPAIN-204ENST00000405578 IGKV1D-43A0A0B4J1Z2 117 aa9.19□□□□□ -0.94
RPAIN-204ENST00000405578 LOC100130705A0A1B0GUX0 176 aa9.19□□□□□ -0.94
RPAIN-204ENST00000405578 IQCMA0A1B0GVH7 501 aa9.19□□□□□ -0.94
RPAIN-204ENST00000405578 A0A1W2PR80 420 aa9.19□□□□□ -0.94
RPAIN-204ENST00000405578 FAM183AA6NL82 134 aa9.19□□□□□ -0.94
RPAIN-204ENST00000405578 H0YJX3 145 aa9.19□□□□□ -0.94
RPAIN-204ENST00000405578 SNAP29O95721 258 aa9.19□□□□□ -0.94
RPAIN-204ENST00000405578 HLA-HP01893 362 aa9.19□□□□□ -0.94
RPAIN-204ENST00000405578 HRGP04196 525 aa9.19□□□□□ -0.94
RPAIN-204ENST00000405578 CBR1P16152 277 aa9.19□□□□□ -0.94
RPAIN-204ENST00000405578 PTAFRP25105 342 aa9.19□□□□□ -0.94
RPAIN-204ENST00000405578 EPHA2P29317 976 aa9.19□□□□□ -0.94
RPAIN-204ENST00000405578 GGT2P36268 569 aa9.19□□□□□ -0.94
RPAIN-204ENST00000405578 POLR2IP36954 125 aaKnown RBP9.19□□□□□ -0.94
RPAIN-204ENST00000405578 ZNF83P51522 516 aa9.19□□□□□ -0.94
RPAIN-204ENST00000405578 RAB1AP62820 205 aa9.19□□□□□ -0.94
RPAIN-204ENST00000405578 HSF2Q03933 536 aa9.19□□□□□ -0.94
RPAIN-204ENST00000405578 PIGFQ07326 219 aa9.19□□□□□ -0.94
RPAIN-204ENST00000405578 SCRN3Q0VDG4 424 aa9.19□□□□□ -0.94
RPAIN-204ENST00000405578 ETFDHQ16134 617 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms