RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 ZNF718Q3SXZ3 478 aa13.9□□□□□ -0.18
LSS-202ENST00000397728 TMEM211Q6ICI0 200 aa13.9□□□□□ -0.18
LSS-202ENST00000397728 ACOXLQ9NUZ1 547 aa13.9□□□□□ -0.18
LSS-202ENST00000397728 GLTPQ9NZD2 209 aa13.9□□□□□ -0.18
LSS-202ENST00000397728 EFEMP2O95967 443 aa13.9□□□□□ -0.18
LSS-202ENST00000397728 HTR2CP28335 458 aa13.9□□□□□ -0.18
LSS-202ENST00000397728 CALHM3Q86XJ0 350 aa13.9□□□□□ -0.18
LSS-202ENST00000397728 OR8H1Q8NGG4 311 aa13.9□□□□□ -0.18
LSS-202ENST00000397728 INSM1Q01101 510 aaPredicted RBP13.89□□□□□ -0.19
LSS-202ENST00000397728 MN1Q10571 1320 aaPredicted RBP13.89□□□□□ -0.19
LSS-202ENST00000397728 NKX6-3A6NJ46 265 aa13.89□□□□□ -0.19
LSS-202ENST00000397728 SERPINE2P07093 398 aa13.89□□□□□ -0.19
LSS-202ENST00000397728 SFTPCP11686 197 aa13.89□□□□□ -0.19
LSS-202ENST00000397728 SHC1P29353 583 aa13.89□□□□□ -0.19
LSS-202ENST00000397728 TMPRSS3P57727 454 aa13.89□□□□□ -0.19
LSS-202ENST00000397728 FUT7Q11130 342 aa13.89□□□□□ -0.19
LSS-202ENST00000397728 RAB12Q6IQ22 244 aa13.89□□□□□ -0.19
LSS-202ENST00000397728 RPL3LQ92901 407 aaKnown RBP13.89□□□□□ -0.19
LSS-202ENST00000397728 SLCO1B1Q9Y6L6 691 aa13.89□□□□□ -0.19
LSS-202ENST00000397728 MAGEB4O15481 346 aaPredicted RBP13.89□□□□□ -0.19
LSS-202ENST00000397728 NCR1O76036 304 aa13.89□□□□□ -0.19
LSS-202ENST00000397728 NDUFB7P17568 137 aa13.89□□□□□ -0.19
LSS-202ENST00000397728 HLA-DMAP28067 261 aa13.89□□□□□ -0.19
LSS-202ENST00000397728 UBE2UQ5VVX9 321 aa13.89□□□□□ -0.19
LSS-202ENST00000397728 KIF18BQ86Y91 864 aa13.89□□□□□ -0.19
LSS-202ENST00000397728 PLPP7Q8NBV4 271 aa13.89□□□□□ -0.19
LSS-202ENST00000397728 SLCO4A1Q96BD0 722 aa13.89□□□□□ -0.19
LSS-202ENST00000397728 TMEM43Q9BTV4 400 aa13.89□□□□□ -0.19
LSS-202ENST00000397728 GPR173Q9NS66 373 aa13.89□□□□□ -0.19
LSS-202ENST00000397728 A4GNTQ9UNA3 340 aa13.89□□□□□ -0.19
LSS-202ENST00000397728 TCRBV5S2A0A599 114 aa13.89□□□□□ -0.19
LSS-202ENST00000397728 TMIGD3P0DMS9 266 aaPredicted RBP13.89□□□□□ -0.19
LSS-202ENST00000397728 BLVRBP30043 206 aaPredicted RBP13.89□□□□□ -0.19
LSS-202ENST00000397728 RAB1AP62820 205 aa13.89□□□□□ -0.19
LSS-202ENST00000397728 GNMTQ14749 295 aa13.89□□□□□ -0.19
LSS-202ENST00000397728 PAQR6Q6TCH4 344 aa13.89□□□□□ -0.19
LSS-202ENST00000397728 FNDC9Q8TBE3 224 aa13.89□□□□□ -0.19
LSS-202ENST00000397728 SMAP2Q8WU79 429 aaPredicted RBP13.89□□□□□ -0.19
LSS-202ENST00000397728 TP63Q9H3D4 680 aaPredicted RBP13.89□□□□□ -0.19
LSS-202ENST00000397728 CCDC59Q9P031 241 aaKnown RBP13.89□□□□□ -0.19
LSS-202ENST00000397728 KANTRA0A1W2PQU2 76 aa13.88□□□□□ -0.19
LSS-202ENST00000397728 FUOMA2VDF0 154 aa13.88□□□□□ -0.19
LSS-202ENST00000397728 DNAJB6O75190 326 aa13.88□□□□□ -0.19
LSS-202ENST00000397728 CEACAM1P13688 526 aa13.88□□□□□ -0.19
LSS-202ENST00000397728 GABRA1P14867 456 aa13.88□□□□□ -0.19
LSS-202ENST00000397728 ZNF83P51522 516 aa13.88□□□□□ -0.19
LSS-202ENST00000397728 ARF1P84077 181 aaKnown RBP13.88□□□□□ -0.19
LSS-202ENST00000397728 PPA1Q15181 289 aa13.88□□□□□ -0.19
LSS-202ENST00000397728 SHBQ15464 509 aa13.88□□□□□ -0.19
LSS-202ENST00000397728 CD226Q15762 336 aa13.88□□□□□ -0.19
LSS-202ENST00000397728 FAM109AQ8N4B1 249 aa13.88□□□□□ -0.19
LSS-202ENST00000397728 SLC22A24Q8N4F4 322 aa13.88□□□□□ -0.19
LSS-202ENST00000397728 BBS1Q8NFJ9 593 aa13.88□□□□□ -0.19
LSS-202ENST00000397728 KCNG3Q8TAE7 436 aa13.88□□□□□ -0.19
LSS-202ENST00000397728 RTL8AQ9BWD3 113 aa13.88□□□□□ -0.19
LSS-202ENST00000397728 NRIP3Q9NQ35 241 aa13.88□□□□□ -0.19
LSS-202ENST00000397728 MAN2C1Q9NTJ4 1040 aa13.88□□□□□ -0.19
LSS-202ENST00000397728 IL17BQ9UHF5 180 aa13.88□□□□□ -0.19
LSS-202ENST00000397728 COL6A6A6NMZ7 2263 aa13.88□□□□□ -0.19
LSS-202ENST00000397728 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.88□□□□□ -0.19
LSS-202ENST00000397728 SMCO3A2RU48 225 aa13.88□□□□□ -0.19
LSS-202ENST00000397728 IGLV3-19P01714 112 aa13.88□□□□□ -0.19
LSS-202ENST00000397728 CELA2AP08217 269 aa13.88□□□□□ -0.19
LSS-202ENST00000397728 SELEP16581 610 aa13.88□□□□□ -0.19
LSS-202ENST00000397728 ERVK-16P61578 105 aa13.88□□□□□ -0.19
LSS-202ENST00000397728 TMEM81Q6P7N7 255 aa13.88□□□□□ -0.19
LSS-202ENST00000397728 DOK3Q7L591 496 aa13.88□□□□□ -0.19
LSS-202ENST00000397728 FAM26EQ8N5C1 309 aa13.88□□□□□ -0.19
LSS-202ENST00000397728 KCNG2Q9UJ96 466 aa13.88□□□□□ -0.19
LSS-202ENST00000397728 TMA7Q9Y2S6 64 aaKnown RBP13.88□□□□□ -0.19
LSS-202ENST00000397728 LCTP09848 1927 aa13.88□□□□□ -0.19
LSS-202ENST00000397728 LOC107986453A0A1B0GWG9 222 aa13.88□□□□□ -0.19
LSS-202ENST00000397728 BET1O15155 118 aa13.88□□□□□ -0.19
LSS-202ENST00000397728 ATG12O94817 140 aa13.88□□□□□ -0.19
LSS-202ENST00000397728 ZNF883P0CG24 379 aa13.88□□□□□ -0.19
LSS-202ENST00000397728 ZNF141Q15928 474 aa13.88□□□□□ -0.19
LSS-202ENST00000397728 SPATA46Q5T0L3 261 aa13.88□□□□□ -0.19
LSS-202ENST00000397728 TPRA1Q86W33 373 aa13.88□□□□□ -0.19
LSS-202ENST00000397728 RLFQ13129 1914 aa13.88□□□□□ -0.19
LSS-202ENST00000397728 hCG_1809904A0A1W2PP81 198 aa13.88□□□□□ -0.19
LSS-202ENST00000397728 A0A1W2PPE2 198 aa13.88□□□□□ -0.19
LSS-202ENST00000397728 A0A1W2PR64 198 aa13.88□□□□□ -0.19
LSS-202ENST00000397728 A0A1W2PRV1 198 aa13.88□□□□□ -0.19
LSS-202ENST00000397728 NOTOA8MTQ0 251 aa13.88□□□□□ -0.19
LSS-202ENST00000397728 ANKRD34CP0C6C1 535 aa13.88□□□□□ -0.19
LSS-202ENST00000397728 GALNSP34059 522 aa13.88□□□□□ -0.19
LSS-202ENST00000397728 TOMM34Q15785 309 aaPredicted RBP13.88□□□□□ -0.19
LSS-202ENST00000397728 GPR32P1Q8NGA4 272 aa13.88□□□□□ -0.19
LSS-202ENST00000397728 OR52N1Q8NH53 320 aa13.88□□□□□ -0.19
LSS-202ENST00000397728 ZNF700Q9H0M5 742 aa13.88□□□□□ -0.19
LSS-202ENST00000397728 ZNF226Q9NYT6 803 aa13.88□□□□□ -0.19
LSS-202ENST00000397728 PILRAQ9UKJ1 303 aa13.88□□□□□ -0.19
LSS-202ENST00000397728 B9D1Q9UPM9 204 aa13.88□□□□□ -0.19
LSS-202ENST00000397728 H3BMQ9 156 aa13.87□□□□□ -0.19
LSS-202ENST00000397728 LYZL6O75951 148 aa13.87□□□□□ -0.19
LSS-202ENST00000397728 AGFG2O95081 481 aa13.87□□□□□ -0.19
LSS-202ENST00000397728 TP53P04637 393 aaPredicted RBP13.87□□□□□ -0.19
LSS-202ENST00000397728 H2AFB2P0C5Z0 115 aa13.87□□□□□ -0.19
LSS-202ENST00000397728 SNRPBP14678 240 aaKnown RBP13.87□□□□□ -0.19
LSS-202ENST00000397728 LGALS4P56470 323 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms