RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 WDR92Q96MX6 357 aa4.56□□□□□ -1.68
SSR1-202ENST00000397511 LMAN2LQ9H0V9 348 aa4.56□□□□□ -1.68
SSR1-202ENST00000397511 TMEM27Q9HBJ8 222 aa4.56□□□□□ -1.68
SSR1-202ENST00000397511 ADGRL4Q9HBW9 690 aa4.56□□□□□ -1.68
SSR1-202ENST00000397511 KRCC1Q9NPI7 259 aaPredicted RBP4.56□□□□□ -1.68
SSR1-202ENST00000397511 UQCC1Q9NVA1 299 aa4.56□□□□□ -1.68
SSR1-202ENST00000397511 C2orf42Q9NWW7 574 aa4.56□□□□□ -1.68
SSR1-202ENST00000397511 GDE1Q9NZC3 331 aa4.56□□□□□ -1.68
SSR1-202ENST00000397511 LRIT1Q9P2V4 623 aa4.56□□□□□ -1.68
SSR1-202ENST00000397511 LOC400499M0QZD8 3231 aa4.56□□□□□ -1.68
SSR1-202ENST00000397511 PRRC2CQ9Y520 2896 aaKnown RBP4.56□□□□□ -1.68
SSR1-202ENST00000397511 A0A0G2JK05 382 aa4.56□□□□□ -1.68
SSR1-202ENST00000397511 TCRBV21S2A2A0A5A6 115 aa4.56□□□□□ -1.68
SSR1-202ENST00000397511 TMEM72A0PK05 275 aa4.56□□□□□ -1.68
SSR1-202ENST00000397511 OR6C76A6NM76 312 aa4.56□□□□□ -1.68
SSR1-202ENST00000397511 TSTD3H0UI37 97 aa4.56□□□□□ -1.68
SSR1-202ENST00000397511 ATP1B1P05026 303 aa4.56□□□□□ -1.68
SSR1-202ENST00000397511 DBIP07108 87 aaKnown RBP4.56□□□□□ -1.68
SSR1-202ENST00000397511 ATF1P18846 271 aa4.56□□□□□ -1.68
SSR1-202ENST00000397511 DDTP30046 118 aa4.56□□□□□ -1.68
SSR1-202ENST00000397511 PNLIPRP2P54317 469 aa4.56□□□□□ -1.68
SSR1-202ENST00000397511 PSG6Q00889 435 aa4.56□□□□□ -1.68
SSR1-202ENST00000397511 SKP2Q13309 424 aa4.56□□□□□ -1.68
SSR1-202ENST00000397511 RBM39Q14498 530 aaKnown RBP4.56□□□□□ -1.68
SSR1-202ENST00000397511 SHHQ15465 462 aa4.56□□□□□ -1.68
SSR1-202ENST00000397511 ZNF239Q16600 458 aaKnown RBP4.56□□□□□ -1.68
SSR1-202ENST00000397511 ALG11Q2TAA5 492 aa4.56□□□□□ -1.68
SSR1-202ENST00000397511 PRICKLE4Q2TBC4 344 aa4.56□□□□□ -1.68
SSR1-202ENST00000397511 PRAMEF17Q5VTA0 474 aa4.56□□□□□ -1.68
SSR1-202ENST00000397511 KIRREL2Q6UWL6 708 aa4.56□□□□□ -1.68
SSR1-202ENST00000397511 GJD3Q8N144 294 aa4.56□□□□□ -1.68
SSR1-202ENST00000397511 GTPBP8Q8N3Z3 284 aaPredicted RBP4.56□□□□□ -1.68
SSR1-202ENST00000397511 BRIX1Q8TDN6 353 aaKnown RBP4.56□□□□□ -1.68
SSR1-202ENST00000397511 SLC37A2Q8TED4 501 aa4.56□□□□□ -1.68
SSR1-202ENST00000397511 ELF4Q99607 663 aaPredicted RBP4.56□□□□□ -1.68
SSR1-202ENST00000397511 KLHDC3Q9BQ90 382 aa4.56□□□□□ -1.68
SSR1-202ENST00000397511 ZNF350Q9GZX5 532 aa4.56□□□□□ -1.68
SSR1-202ENST00000397511 TRPV4Q9HBA0 871 aa4.56□□□□□ -1.68
SSR1-202ENST00000397511 TAS2R10Q9NYW0 307 aa4.56□□□□□ -1.68
SSR1-202ENST00000397511 PILRAQ9UKJ1 303 aa4.56□□□□□ -1.68
SSR1-202ENST00000397511 LHX6Q9UPM6 363 aa4.56□□□□□ -1.68
SSR1-202ENST00000397511 EXOGQ9Y2C4 368 aaKnown RBP4.56□□□□□ -1.68
SSR1-202ENST00000397511 PCDHGA5Q9Y5G8 931 aa4.56□□□□□ -1.68
SSR1-202ENST00000397511 ARID1AO14497 2285 aa4.56□□□□□ -1.68
SSR1-202ENST00000397511 ABCA7Q8IZY2 2146 aa4.56□□□□□ -1.68
SSR1-202ENST00000397511 MUC22E2RYF6 1773 aaPredicted RBP4.56□□□□□ -1.68
SSR1-202ENST00000397511 MEIS3P1A6NDR6 274 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 TVP23AA6NH52 213 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 SMAD9O15198 467 aaKnown RBP4.55□□□□□ -1.68
SSR1-202ENST00000397511 PPIHO43447 177 aaKnown RBP4.55□□□□□ -1.68
SSR1-202ENST00000397511 FMO6PO60774 539 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 RCBTB2O95199 551 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 GPR75O95800 540 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 ACTL6AO96019 429 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 MBP02144 154 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 RLN1P04808 185 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 EPXP11678 715 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 CPT2P23786 658 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 EDNRAP25101 427 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 HOXC12P31275 282 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 FAUP35544 74 aaKnown RBP4.55□□□□□ -1.68
SSR1-202ENST00000397511 PMELP40967 661 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 NRG3P56975 720 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 PKIAP61925 76 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 ZNF345Q14585 488 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 UBE2NLQ5JXB2 153 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 STPG1Q5TH74 334 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 DCAF12L2Q5VW00 463 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 JMJD6Q6NYC1 403 aaPredicted RBP4.55□□□□□ -1.68
SSR1-202ENST00000397511 IL34Q6ZMJ4 242 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 ZNF813Q6ZN06 617 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 MRGPREQ86SM8 312 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 GID4Q8IVV7 300 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 CDRT4Q8N9R6 151 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 RCBTB1Q8NDN9 531 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 OR52I2Q8NH67 350 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 FLVCR1-AS1Q8TAF5 88 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 PAQR8Q8TEZ7 354 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 C3orf49Q96BT1 292 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 HSPA12BQ96MM6 686 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 ZNF75AQ96N20 296 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 RSRP1Q9BUV0 290 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 ULBP3Q9BZM4 244 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 NRSN2Q9GZP1 204 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 MMP26Q9NRE1 261 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 CMC2Q9NRP2 79 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 DUSP22Q9NRW4 184 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 POT1Q9NUX5 634 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 KLK11Q9UBX7 282 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 ZNF223Q9UK11 482 aaPredicted RBP4.55□□□□□ -1.68
SSR1-202ENST00000397511 CYP8B1Q9UNU6 501 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 C19orf53Q9UNZ5 99 aaPredicted RBP4.55□□□□□ -1.68
SSR1-202ENST00000397511 MSRB2Q9Y3D2 182 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 SPACA6W5XKT8 324 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 A0A087X0M5 115 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 A0A1B0GX30 115 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 SLC22A31A6NKX4 558 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 OR2AT4A6NND4 320 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 GPR89AB7ZAQ6 455 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 TGFBR3LH3BV60 316 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms