RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 TSTQ16762 297 aaKnown RBP16.8■□□□□ 0.28
TSPAN4-204ENST00000397404 WDFY1Q8IWB7 410 aa16.8■□□□□ 0.28
TSPAN4-204ENST00000397404 PHC2Q8IXK0 858 aa16.8■□□□□ 0.28
TSPAN4-204ENST00000397404 RNF133Q8WVZ7 376 aa16.8■□□□□ 0.28
TSPAN4-204ENST00000397404 GPR35Q9HC97 309 aa16.8■□□□□ 0.28
TSPAN4-204ENST00000397404 GNG8Q9UK08 70 aa16.8■□□□□ 0.28
TSPAN4-204ENST00000397404 COPS3Q9UNS2 423 aa16.8■□□□□ 0.28
TSPAN4-204ENST00000397404 SERPINA3P01011 423 aa16.79■□□□□ 0.28
TSPAN4-204ENST00000397404 CST2P09228 141 aa16.79■□□□□ 0.28
TSPAN4-204ENST00000397404 TGFBR2P37173 567 aa16.79■□□□□ 0.28
TSPAN4-204ENST00000397404 RIDAP52758 137 aaKnown RBP16.79■□□□□ 0.28
TSPAN4-204ENST00000397404 TGFBR3Q03167 851 aa16.79■□□□□ 0.28
TSPAN4-204ENST00000397404 EIF2B1Q14232 305 aaKnown RBP16.79■□□□□ 0.28
TSPAN4-204ENST00000397404 C1QTNF12Q5T7M4 302 aa16.79■□□□□ 0.28
TSPAN4-204ENST00000397404 C1orf185Q5T7R7 199 aa16.79■□□□□ 0.28
TSPAN4-204ENST00000397404 FDX2Q6P4F2 183 aa16.79■□□□□ 0.28
TSPAN4-204ENST00000397404 KRT77Q7Z794 578 aa16.79■□□□□ 0.28
TSPAN4-204ENST00000397404 KLBQ86Z14 1044 aa16.79■□□□□ 0.28
TSPAN4-204ENST00000397404 CCDC36Q8IYA8 594 aa16.79■□□□□ 0.28
TSPAN4-204ENST00000397404 FOXB1Q99853 325 aa16.79■□□□□ 0.28
TSPAN4-204ENST00000397404 ABHD6Q9BV23 337 aa16.79■□□□□ 0.28
TSPAN4-204ENST00000397404 TMEM38BQ9NVV0 291 aa16.79■□□□□ 0.28
TSPAN4-204ENST00000397404 STUB1Q9UNE7 303 aa16.79■□□□□ 0.28
TSPAN4-204ENST00000397404 MAP1BP46821 2468 aaKnown RBP16.78■□□□□ 0.28
TSPAN4-204ENST00000397404 OGG1O15527 345 aa16.78■□□□□ 0.28
TSPAN4-204ENST00000397404 UPK3AO75631 287 aa16.78■□□□□ 0.28
TSPAN4-204ENST00000397404 TPOP07202 933 aa16.78■□□□□ 0.28
TSPAN4-204ENST00000397404 CCR9P51686 369 aa16.78■□□□□ 0.28
TSPAN4-204ENST00000397404 GTF2A1P52655 376 aaPredicted RBP16.78■□□□□ 0.28
TSPAN4-204ENST00000397404 OR12D2P58182 307 aa16.78■□□□□ 0.28
TSPAN4-204ENST00000397404 ROR2Q01974 943 aaKnown RBP16.78■□□□□ 0.28
TSPAN4-204ENST00000397404 FBXW9Q5XUX1 488 aa16.78■□□□□ 0.28
TSPAN4-204ENST00000397404 ZNF585AQ6P3V2 769 aa16.78■□□□□ 0.28
TSPAN4-204ENST00000397404 LYPD4Q6UWN0 246 aa16.78■□□□□ 0.28
TSPAN4-204ENST00000397404 CISD2Q8N5K1 135 aaKnown RBP16.78■□□□□ 0.28
TSPAN4-204ENST00000397404 YIPF7Q8N8F6 280 aa16.78■□□□□ 0.28
TSPAN4-204ENST00000397404 ST7LQ8TDW4 575 aa16.78■□□□□ 0.28
TSPAN4-204ENST00000397404 PHYHIPQ92561 330 aa16.78■□□□□ 0.28
TSPAN4-204ENST00000397404 SMIM19Q96E16 107 aa16.78■□□□□ 0.28
TSPAN4-204ENST00000397404 PELI1Q96FA3 418 aa16.78■□□□□ 0.28
TSPAN4-204ENST00000397404 ATPIF1Q9UII2 106 aa16.78■□□□□ 0.28
TSPAN4-204ENST00000397404 IKZF2Q9UKS7 526 aa16.78■□□□□ 0.28
TSPAN4-204ENST00000397404 ZMIZ1Q9ULJ6 1067 aa16.78■□□□□ 0.28
TSPAN4-204ENST00000397404 TLN1Q9Y490 2541 aaKnown RBP16.77■□□□□ 0.28
TSPAN4-204ENST00000397404 TRIM64BA6NI03 449 aa16.77■□□□□ 0.28
TSPAN4-204ENST00000397404 ZNF878C9JN71 531 aa16.77■□□□□ 0.28
TSPAN4-204ENST00000397404 AIREO43918 545 aa16.77■□□□□ 0.28
TSPAN4-204ENST00000397404 ABHD16AO95870 558 aa16.77■□□□□ 0.28
TSPAN4-204ENST00000397404 OR8G3PP0DMU2 310 aa16.77■□□□□ 0.28
TSPAN4-204ENST00000397404 MPGP29372 298 aa16.77■□□□□ 0.28
TSPAN4-204ENST00000397404 NTF4P34130 210 aa16.77■□□□□ 0.28
TSPAN4-204ENST00000397404 GRB2P62993 217 aaKnown RBP16.77■□□□□ 0.28
TSPAN4-204ENST00000397404 SCRN3Q0VDG4 424 aa16.77■□□□□ 0.28
TSPAN4-204ENST00000397404 ECH1Q13011 328 aa16.77■□□□□ 0.28
TSPAN4-204ENST00000397404 CEACAM16Q2WEN9 425 aa16.77■□□□□ 0.28
TSPAN4-204ENST00000397404 TSPO2Q5TGU0 170 aa16.77■□□□□ 0.28
TSPAN4-204ENST00000397404 LIPKQ5VXJ0 399 aa16.77■□□□□ 0.28
TSPAN4-204ENST00000397404 PAMR1Q6UXH9 720 aa16.77■□□□□ 0.28
TSPAN4-204ENST00000397404 SSX6Q7RTT6 188 aa16.77■□□□□ 0.28
TSPAN4-204ENST00000397404 DCXRQ7Z4W1 244 aa16.77■□□□□ 0.28
TSPAN4-204ENST00000397404 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.77■□□□□ 0.28
TSPAN4-204ENST00000397404 OR5M9Q8NGP3 310 aa16.77■□□□□ 0.28
TSPAN4-204ENST00000397404 RPS4Y2Q8TD47 263 aa16.77■□□□□ 0.28
TSPAN4-204ENST00000397404 NABP1Q96AH0 204 aa16.77■□□□□ 0.28
TSPAN4-204ENST00000397404 SNRNP40Q96DI7 357 aaKnown RBP16.77■□□□□ 0.28
TSPAN4-204ENST00000397404 MOB1AQ9H8S9 216 aa16.77■□□□□ 0.28
TSPAN4-204ENST00000397404 ISG20L2Q9H9L3 353 aaKnown RBP16.77■□□□□ 0.28
TSPAN4-204ENST00000397404 MRM2Q9UI43 246 aaKnown RBP16.77■□□□□ 0.28
TSPAN4-204ENST00000397404 SSR3Q9UNL2 185 aa16.77■□□□□ 0.28
TSPAN4-204ENST00000397404 ZNF835Q9Y2P0 537 aa16.77■□□□□ 0.28
TSPAN4-204ENST00000397404 GSTK1Q9Y2Q3 226 aa16.77■□□□□ 0.28
TSPAN4-204ENST00000397404 PRRC2CQ9Y520 2896 aaKnown RBP16.76■□□□□ 0.27
TSPAN4-204ENST00000397404 ACOD1A6NK06 481 aa16.76■□□□□ 0.27
TSPAN4-204ENST00000397404 IL2RAP01589 272 aa16.76■□□□□ 0.27
TSPAN4-204ENST00000397404 HOXB1P14653 301 aaPredicted RBP16.76■□□□□ 0.27
TSPAN4-204ENST00000397404 CELP19835 753 aa16.76■□□□□ 0.27
TSPAN4-204ENST00000397404 PAX7P23759 505 aa16.76■□□□□ 0.27
TSPAN4-204ENST00000397404 PER3P56645 1201 aa16.76■□□□□ 0.27
TSPAN4-204ENST00000397404 TUBA1BP68363 451 aa16.76■□□□□ 0.27
TSPAN4-204ENST00000397404 CDK5R1Q15078 307 aa16.76■□□□□ 0.27
TSPAN4-204ENST00000397404 SSX1Q16384 188 aa16.76■□□□□ 0.27
TSPAN4-204ENST00000397404 SGCAQ16586 387 aa16.76■□□□□ 0.27
TSPAN4-204ENST00000397404 MEP1BQ16820 701 aa16.76■□□□□ 0.27
TSPAN4-204ENST00000397404 ZNF829Q3KNS6 432 aaPredicted RBP16.76■□□□□ 0.27
TSPAN4-204ENST00000397404 PHYHD1Q5SRE7 291 aa16.76■□□□□ 0.27
TSPAN4-204ENST00000397404 LIPNQ5VXI9 398 aa16.76■□□□□ 0.27
TSPAN4-204ENST00000397404 DMKNQ6E0U4 476 aaPredicted RBP16.76■□□□□ 0.27
TSPAN4-204ENST00000397404 CD200R1LQ6Q8B3 271 aa16.76■□□□□ 0.27
TSPAN4-204ENST00000397404 GFRALQ6UXV0 394 aa16.76■□□□□ 0.27
TSPAN4-204ENST00000397404 TUBA1AQ71U36 451 aa16.76■□□□□ 0.27
TSPAN4-204ENST00000397404 ZNF775Q96BV0 537 aaPredicted RBP16.76■□□□□ 0.27
TSPAN4-204ENST00000397404 BOD1Q96IK1 185 aa16.76■□□□□ 0.27
TSPAN4-204ENST00000397404 ALKBH3Q96Q83 286 aaPredicted RBP16.76■□□□□ 0.27
TSPAN4-204ENST00000397404 SLC7A10Q9NS82 523 aa16.76■□□□□ 0.27
TSPAN4-204ENST00000397404 GDF2Q9UK05 429 aaPredicted RBP16.76■□□□□ 0.27
TSPAN4-204ENST00000397404 TMEM212A6NML5 194 aa16.75■□□□□ 0.27
TSPAN4-204ENST00000397404 H3BMQ9 156 aa16.75■□□□□ 0.27
TSPAN4-204ENST00000397404 FGF9P31371 208 aaPredicted RBP16.75■□□□□ 0.27
TSPAN4-204ENST00000397404 OPRL1P41146 370 aa16.75■□□□□ 0.27
TSPAN4-204ENST00000397404 HCCSP53701 268 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms