RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 ZNF593O00488 134 aaPredicted RBP20.62■□□□□ 0.89
TSPAN4-203ENST00000397397 SPARCP09486 303 aa20.62■□□□□ 0.89
TSPAN4-203ENST00000397397 PPP3CBP16298 524 aa20.62■□□□□ 0.89
TSPAN4-203ENST00000397397 MTNR1AP48039 350 aa20.62■□□□□ 0.89
TSPAN4-203ENST00000397397 ZNF91Q05481 1191 aa20.62■□□□□ 0.89
TSPAN4-203ENST00000397397 PIGFQ07326 219 aa20.62■□□□□ 0.89
TSPAN4-203ENST00000397397 SNTB1Q13884 538 aaKnown RBP20.62■□□□□ 0.89
TSPAN4-203ENST00000397397 SLC36A2Q495M3 483 aa20.62■□□□□ 0.89
TSPAN4-203ENST00000397397 LAIR2Q6ISS4 152 aa20.62■□□□□ 0.89
TSPAN4-203ENST00000397397 OR51G2Q8NGK0 314 aa20.62■□□□□ 0.89
TSPAN4-203ENST00000397397 OR6N2Q8NGY6 317 aa20.62■□□□□ 0.89
TSPAN4-203ENST00000397397 FGFBP3Q8TAT2 258 aa20.62■□□□□ 0.89
TSPAN4-203ENST00000397397 MUCL1Q96DR8 90 aa20.62■□□□□ 0.89
TSPAN4-203ENST00000397397 FBXO17Q96EF6 278 aa20.62■□□□□ 0.89
TSPAN4-203ENST00000397397 RNFT2Q96EX2 444 aa20.62■□□□□ 0.89
TSPAN4-203ENST00000397397 PSMG3-AS1Q96PY0 264 aa20.62■□□□□ 0.89
TSPAN4-203ENST00000397397 CNN2Q99439 309 aaKnown RBP20.62■□□□□ 0.89
TSPAN4-203ENST00000397397 RNF121Q9H920 327 aa20.62■□□□□ 0.89
TSPAN4-203ENST00000397397 ZNF224Q9NZL3 707 aa20.62■□□□□ 0.89
TSPAN4-203ENST00000397397 KCNG2Q9UJ96 466 aa20.62■□□□□ 0.89
TSPAN4-203ENST00000397397 RPL36Q9Y3U8 105 aaKnown RBP20.62■□□□□ 0.89
TSPAN4-203ENST00000397397 UBL3O95164 117 aa20.61■□□□□ 0.89
TSPAN4-203ENST00000397397 WNT11O96014 354 aa20.61■□□□□ 0.89
TSPAN4-203ENST00000397397 DBTP11182 482 aaKnown RBP20.61■□□□□ 0.89
TSPAN4-203ENST00000397397 ATP6V1E1P36543 226 aa20.61■□□□□ 0.89
TSPAN4-203ENST00000397397 RPS27P42677 84 aaKnown RBP20.61■□□□□ 0.89
TSPAN4-203ENST00000397397 PCBD1P61457 104 aa20.61■□□□□ 0.89
TSPAN4-203ENST00000397397 SLC16A9Q7RTY1 509 aa20.61■□□□□ 0.89
TSPAN4-203ENST00000397397 LINC00346Q8IVM7 164 aa20.61■□□□□ 0.89
TSPAN4-203ENST00000397397 HSD17B8Q92506 261 aa20.61■□□□□ 0.89
TSPAN4-203ENST00000397397 OBP2BQ9NPH6 170 aa20.61■□□□□ 0.89
TSPAN4-203ENST00000397397 ASH2LQ9UBL3 628 aa20.61■□□□□ 0.89
TSPAN4-203ENST00000397397 LRRC42Q9Y546 428 aa20.61■□□□□ 0.89
TSPAN4-203ENST00000397397 LHFPL6Q9Y693 200 aa20.61■□□□□ 0.89
TSPAN4-203ENST00000397397 USP9XQ93008 2570 aaPredicted RBP20.61■□□□□ 0.89
TSPAN4-203ENST00000397397 ZNF503-AS2A6NEH8 195 aa20.61■□□□□ 0.89
TSPAN4-203ENST00000397397 TMCC2O75069 709 aa20.61■□□□□ 0.89
TSPAN4-203ENST00000397397 APOL3O95236 402 aa20.61■□□□□ 0.89
TSPAN4-203ENST00000397397 POU4F2Q12837 409 aa20.61■□□□□ 0.89
TSPAN4-203ENST00000397397 MED21Q13503 144 aa20.61■□□□□ 0.89
TSPAN4-203ENST00000397397 AQP6Q13520 282 aa20.61■□□□□ 0.89
TSPAN4-203ENST00000397397 TAB1Q15750 504 aa20.61■□□□□ 0.89
TSPAN4-203ENST00000397397 TEX30Q5JUR7 227 aa20.61■□□□□ 0.89
TSPAN4-203ENST00000397397 C6orf141Q5SZD1 244 aa20.61■□□□□ 0.89
TSPAN4-203ENST00000397397 ALKBH2Q6NS38 261 aa20.61■□□□□ 0.89
TSPAN4-203ENST00000397397 TMEM53Q6P2H8 277 aa20.61■□□□□ 0.89
TSPAN4-203ENST00000397397 CORO6Q6QEF8 472 aa20.61■□□□□ 0.89
TSPAN4-203ENST00000397397 DPPA2Q7Z7J5 298 aa20.61■□□□□ 0.89
TSPAN4-203ENST00000397397 OR2AJ1Q8NGZ0 328 aa20.61■□□□□ 0.89
TSPAN4-203ENST00000397397 ZC3HAV1LQ96H79 300 aaKnown RBP20.61■□□□□ 0.89
TSPAN4-203ENST00000397397 WFIKKN1Q96NZ8 548 aa20.61■□□□□ 0.89
TSPAN4-203ENST00000397397 MED18Q9BUE0 208 aa20.61■□□□□ 0.89
TSPAN4-203ENST00000397397 ADGRL4Q9HBW9 690 aa20.61■□□□□ 0.89
TSPAN4-203ENST00000397397 NDRG3Q9UGV2 375 aa20.61■□□□□ 0.89
TSPAN4-203ENST00000397397 PCDHGB5Q9Y5G0 923 aa20.61■□□□□ 0.89
TSPAN4-203ENST00000397397 KLF2Q9Y5W3 355 aaPredicted RBP20.61■□□□□ 0.89
TSPAN4-203ENST00000397397 SLC25A15Q9Y619 301 aa20.61■□□□□ 0.89
TSPAN4-203ENST00000397397 C19orf84I3L1E1 186 aa20.6■□□□□ 0.89
TSPAN4-203ENST00000397397 FAM20BO75063 409 aa20.6■□□□□ 0.89
TSPAN4-203ENST00000397397 MMP7P09237 267 aaPredicted RBP20.6■□□□□ 0.89
TSPAN4-203ENST00000397397 SBK2P0C263 348 aa20.6■□□□□ 0.89
TSPAN4-203ENST00000397397 PSKH1P11801 424 aa20.6■□□□□ 0.89
TSPAN4-203ENST00000397397 ZNF32P17041 273 aa20.6■□□□□ 0.89
TSPAN4-203ENST00000397397 PPA1Q15181 289 aa20.6■□□□□ 0.89
TSPAN4-203ENST00000397397 GSG1Q2KHT4 349 aa20.6■□□□□ 0.89
TSPAN4-203ENST00000397397 C22orf34Q6ZV56 151 aa20.6■□□□□ 0.89
TSPAN4-203ENST00000397397 SHFQ7M4L6 423 aa20.6■□□□□ 0.89
TSPAN4-203ENST00000397397 DPY19L4Q7Z388 723 aa20.6■□□□□ 0.89
TSPAN4-203ENST00000397397 SYT9Q86SS6 491 aa20.6■□□□□ 0.89
TSPAN4-203ENST00000397397 MDP1Q86V88 176 aa20.6■□□□□ 0.89
TSPAN4-203ENST00000397397 BPIFB6Q8NFQ5 453 aa20.6■□□□□ 0.89
TSPAN4-203ENST00000397397 LINC01560Q8TB33 94 aa20.6■□□□□ 0.89
TSPAN4-203ENST00000397397 SMAP2Q8WU79 429 aaPredicted RBP20.6■□□□□ 0.89
TSPAN4-203ENST00000397397 WACQ9BTA9 647 aa20.6■□□□□ 0.89
TSPAN4-203ENST00000397397 B3GNT2Q9NY97 397 aa20.6■□□□□ 0.89
TSPAN4-203ENST00000397397 CYB5R1Q9UHQ9 305 aa20.6■□□□□ 0.89
TSPAN4-203ENST00000397397 ARR3P36575 388 aa20.59■□□□□ 0.89
TSPAN4-203ENST00000397397 RAB1AP62820 205 aa20.59■□□□□ 0.89
TSPAN4-203ENST00000397397 PCK2Q16822 640 aa20.59■□□□□ 0.89
TSPAN4-203ENST00000397397 SLC18B1Q6NT16 456 aa20.59■□□□□ 0.89
TSPAN4-203ENST00000397397 SLC35F2Q8IXU6 374 aa20.59■□□□□ 0.89
TSPAN4-203ENST00000397397 OR4F15Q8NGB8 312 aa20.59■□□□□ 0.89
TSPAN4-203ENST00000397397 LGALS12Q96DT0 336 aa20.59■□□□□ 0.89
TSPAN4-203ENST00000397397 C1QTNF6Q9BXI9 259 aa20.59■□□□□ 0.89
TSPAN4-203ENST00000397397 YIPF3Q9GZM5 350 aa20.59■□□□□ 0.89
TSPAN4-203ENST00000397397 NOX3Q9HBY0 568 aa20.59■□□□□ 0.89
TSPAN4-203ENST00000397397 UBAP1Q9NZ09 502 aa20.59■□□□□ 0.89
TSPAN4-203ENST00000397397 TIMM10BQ9Y5J6 103 aa20.59■□□□□ 0.89
TSPAN4-203ENST00000397397 SPTBN1Q01082 2364 aaKnown RBP20.58■□□□□ 0.89
TSPAN4-203ENST00000397397 TUBAL3A6NHL2 446 aa20.58■□□□□ 0.88
TSPAN4-203ENST00000397397 XPNPEP2O43895 674 aa20.58■□□□□ 0.88
TSPAN4-203ENST00000397397 RAB36O95755 333 aa20.58■□□□□ 0.88
TSPAN4-203ENST00000397397 HCCSP53701 268 aa20.58■□□□□ 0.88
TSPAN4-203ENST00000397397 SCRN3Q0VDG4 424 aa20.58■□□□□ 0.88
TSPAN4-203ENST00000397397 C1QTNF12Q5T7M4 302 aa20.58■□□□□ 0.88
TSPAN4-203ENST00000397397 TMEM154Q6P9G4 183 aa20.58■□□□□ 0.88
TSPAN4-203ENST00000397397 WFDC8Q8IUA0 241 aa20.58■□□□□ 0.88
TSPAN4-203ENST00000397397 GJC3Q8NFK1 279 aa20.58■□□□□ 0.88
TSPAN4-203ENST00000397397 PLCXD1Q9NUJ7 323 aa20.58■□□□□ 0.88
TSPAN4-203ENST00000397397 GDF2Q9UK05 429 aaPredicted RBP20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms