RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 CCNB1IP1Q9NPC3 277 aa7.4□□□□□ -1.22
CAPN3-208ENST00000397204 UBAP1Q9NZ09 502 aa7.4□□□□□ -1.22
CAPN3-208ENST00000397204 CCDC167Q9P0B6 97 aa7.4□□□□□ -1.22
CAPN3-208ENST00000397204 LEF1Q9UJU2 399 aaPredicted RBP7.4□□□□□ -1.22
CAPN3-208ENST00000397204 ANGPT4Q9Y264 503 aa7.4□□□□□ -1.22
CAPN3-208ENST00000397204 NPTNQ9Y639 398 aa7.4□□□□□ -1.22
CAPN3-208ENST00000397204 AUP1Q9Y679 476 aa7.4□□□□□ -1.22
CAPN3-208ENST00000397204 ARHGAP32A7KAX9 2087 aa7.4□□□□□ -1.23
CAPN3-208ENST00000397204 LOC100509620A0A075B734 347 aa7.39□□□□□ -1.23
CAPN3-208ENST00000397204 ISPDA4D126 451 aa7.39□□□□□ -1.23
CAPN3-208ENST00000397204 GMNCA6NCL1 334 aa7.39□□□□□ -1.23
CAPN3-208ENST00000397204 CPSF4LA6NMK7 179 aaKnown RBP7.39□□□□□ -1.23
CAPN3-208ENST00000397204 MCIDASD6RGH6 385 aa7.39□□□□□ -1.23
CAPN3-208ENST00000397204 CLDN34H7C241 214 aa7.39□□□□□ -1.23
CAPN3-208ENST00000397204 TRMUO75648 421 aaKnown RBP7.39□□□□□ -1.23
CAPN3-208ENST00000397204 IGF2P01344 180 aa7.39□□□□□ -1.23
CAPN3-208ENST00000397204 UMPSP11172 480 aa7.39□□□□□ -1.23
CAPN3-208ENST00000397204 NR2C1P13056 603 aa7.39□□□□□ -1.23
CAPN3-208ENST00000397204 ZNF32P17041 273 aa7.39□□□□□ -1.23
CAPN3-208ENST00000397204 TUBG1P23258 451 aa7.39□□□□□ -1.23
CAPN3-208ENST00000397204 CPT2P23786 658 aa7.39□□□□□ -1.23
CAPN3-208ENST00000397204 MPV17P39210 176 aa7.39□□□□□ -1.23
CAPN3-208ENST00000397204 WNT5AP41221 380 aa7.39□□□□□ -1.23
CAPN3-208ENST00000397204 GUCA1AP43080 201 aaPredicted RBP7.39□□□□□ -1.23
CAPN3-208ENST00000397204 SLC6A9P48067 706 aa7.39□□□□□ -1.23
CAPN3-208ENST00000397204 UGT2B15P54855 530 aa7.39□□□□□ -1.23
CAPN3-208ENST00000397204 IL13RA1P78552 427 aa7.39□□□□□ -1.23
CAPN3-208ENST00000397204 PSG4Q00888 419 aa7.39□□□□□ -1.23
CAPN3-208ENST00000397204 DEFA6Q01524 100 aa7.39□□□□□ -1.23
CAPN3-208ENST00000397204 GLO1Q04760 184 aa7.39□□□□□ -1.23
CAPN3-208ENST00000397204 ZNF154Q13106 437 aa7.39□□□□□ -1.23
CAPN3-208ENST00000397204 BAMBIQ13145 260 aa7.39□□□□□ -1.23
CAPN3-208ENST00000397204 CDK5R2Q13319 367 aa7.39□□□□□ -1.23
CAPN3-208ENST00000397204 SGCAQ16586 387 aa7.39□□□□□ -1.23
CAPN3-208ENST00000397204 ARL9Q6T311 187 aa7.39□□□□□ -1.23
CAPN3-208ENST00000397204 NANOGNBQ7Z5D8 188 aa7.39□□□□□ -1.23
CAPN3-208ENST00000397204 ZER1Q7Z7L7 766 aa7.39□□□□□ -1.23
CAPN3-208ENST00000397204 PATL1Q86TB9 770 aaKnown RBP7.39□□□□□ -1.23
CAPN3-208ENST00000397204 LRRC28Q86X40 367 aaPredicted RBP7.39□□□□□ -1.23
CAPN3-208ENST00000397204 PTOV1Q86YD1 416 aa7.39□□□□□ -1.23
CAPN3-208ENST00000397204 RBM45Q8IUH3 476 aaKnown RBP7.39□□□□□ -1.23
CAPN3-208ENST00000397204 SLC30A8Q8IWU4 369 aa7.39□□□□□ -1.23
CAPN3-208ENST00000397204 ZNF101Q8IZC7 436 aa7.39□□□□□ -1.23
CAPN3-208ENST00000397204 KLHL36Q8N4N3 616 aa7.39□□□□□ -1.23
CAPN3-208ENST00000397204 SPICQ8N5J4 248 aa7.39□□□□□ -1.23
CAPN3-208ENST00000397204 DEFB108BQ8NET1 73 aa7.39□□□□□ -1.23
CAPN3-208ENST00000397204 NOXO1Q8NFA2 376 aa7.39□□□□□ -1.23
CAPN3-208ENST00000397204 GPR32P1Q8NGA4 272 aa7.39□□□□□ -1.23
CAPN3-208ENST00000397204 SLC25A40Q8TBP6 338 aa7.39□□□□□ -1.23
CAPN3-208ENST00000397204 FNDC8Q8TC99 324 aa7.39□□□□□ -1.23
CAPN3-208ENST00000397204 IPCEF1Q8WWN9 437 aaPredicted RBP7.39□□□□□ -1.23
CAPN3-208ENST00000397204 LIPHQ8WWY8 451 aa7.39□□□□□ -1.23
CAPN3-208ENST00000397204 SLC25A28Q96A46 364 aa7.39□□□□□ -1.23
CAPN3-208ENST00000397204 C7orf26Q96N11 449 aa7.39□□□□□ -1.23
CAPN3-208ENST00000397204 OR2J1Q9GZK6 312 aa7.39□□□□□ -1.23
CAPN3-208ENST00000397204 SLITRK2Q9H156 845 aa7.39□□□□□ -1.23
CAPN3-208ENST00000397204 ELOVL3Q9HB03 270 aa7.39□□□□□ -1.23
CAPN3-208ENST00000397204 PATZ1Q9HBE1 687 aaKnown RBP7.39□□□□□ -1.23
CAPN3-208ENST00000397204 MEPEQ9NQ76 525 aaPredicted RBP7.39□□□□□ -1.23
CAPN3-208ENST00000397204 TUBG2Q9NRH3 451 aa7.39□□□□□ -1.23
CAPN3-208ENST00000397204 INIPQ9NRY2 104 aa7.39□□□□□ -1.23
CAPN3-208ENST00000397204 ZNF69Q9UC07 566 aa7.39□□□□□ -1.23
CAPN3-208ENST00000397204 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.39□□□□□ -1.23
CAPN3-208ENST00000397204 PURGQ9UJV8 347 aaKnown RBP7.39□□□□□ -1.23
CAPN3-208ENST00000397204 SLC7A7Q9UM01 511 aa7.39□□□□□ -1.23
CAPN3-208ENST00000397204 TIMM10BQ9Y5J6 103 aa7.39□□□□□ -1.23
CAPN3-208ENST00000397204 WNK1Q9H4A3 2382 aa7.38□□□□□ -1.23
CAPN3-208ENST00000397204 HTR3EA5X5Y0 456 aa7.38□□□□□ -1.23
CAPN3-208ENST00000397204 ZSCAN5BA6NJL1 495 aa7.38□□□□□ -1.23
CAPN3-208ENST00000397204 NPIPB13A6NJU9 1138 aa7.38□□□□□ -1.23
CAPN3-208ENST00000397204 NPIPB4C9JG80 1138 aa7.38□□□□□ -1.23
CAPN3-208ENST00000397204 TRAPPC2LH3BP13 241 aa7.38□□□□□ -1.23
CAPN3-208ENST00000397204 KPNA4O00629 521 aaPredicted RBP7.38□□□□□ -1.23
CAPN3-208ENST00000397204 IGHV2-70P01814 119 aa7.38□□□□□ -1.23
CAPN3-208ENST00000397204 IGHMP01871 453 aa7.38□□□□□ -1.23
CAPN3-208ENST00000397204 MT-ND1P03886 318 aa7.38□□□□□ -1.23
CAPN3-208ENST00000397204 RNASE1P07998 156 aaKnown RBP7.38□□□□□ -1.23
CAPN3-208ENST00000397204 CST2P09228 141 aa7.38□□□□□ -1.23
CAPN3-208ENST00000397204 TSPAN19P0C672 248 aa7.38□□□□□ -1.23
CAPN3-208ENST00000397204 PPIAL4GP0DN37 164 aa7.38□□□□□ -1.23
CAPN3-208ENST00000397204 ZNF12P17014 697 aa7.38□□□□□ -1.23
CAPN3-208ENST00000397204 CD247P20963 164 aa7.38□□□□□ -1.23
CAPN3-208ENST00000397204 CDAP32320 146 aa7.38□□□□□ -1.23
CAPN3-208ENST00000397204 RBM34P42696 430 aaKnown RBP7.38□□□□□ -1.23
CAPN3-208ENST00000397204 ARHGDIAP52565 204 aa7.38□□□□□ -1.23
CAPN3-208ENST00000397204 MAGOHP61326 146 aaKnown RBP7.38□□□□□ -1.23
CAPN3-208ENST00000397204 PCBD1P61457 104 aa7.38□□□□□ -1.23
CAPN3-208ENST00000397204 PPP1CBP62140 327 aa7.38□□□□□ -1.23
CAPN3-208ENST00000397204 ID3Q02535 119 aa7.38□□□□□ -1.23
CAPN3-208ENST00000397204 RPL18Q07020 188 aaKnown RBP7.38□□□□□ -1.23
CAPN3-208ENST00000397204 TAF11Q15544 211 aa7.38□□□□□ -1.23
CAPN3-208ENST00000397204 CYP51A1Q16850 503 aa7.38□□□□□ -1.23
CAPN3-208ENST00000397204 TMEM155Q4W5P6 130 aa7.38□□□□□ -1.23
CAPN3-208ENST00000397204 AGKQ53H12 422 aa7.38□□□□□ -1.23
CAPN3-208ENST00000397204 ARMCX4Q5H9R4 360 aa7.38□□□□□ -1.23
CAPN3-208ENST00000397204 KLF17Q5JT82 389 aaPredicted RBP7.38□□□□□ -1.23
CAPN3-208ENST00000397204 SPATA46Q5T0L3 261 aa7.38□□□□□ -1.23
CAPN3-208ENST00000397204 ARMC4Q5T2S8 1044 aa7.38□□□□□ -1.23
CAPN3-208ENST00000397204 INTS11Q5TA45 600 aaKnown RBP7.38□□□□□ -1.23
CAPN3-208ENST00000397204 OR4D11Q8NGI4 311 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms