RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 RNF133Q8WVZ7 376 aa12□□□□□ -0.49
MCF2L-209ENST00000397036 ISOC1Q96CN7 298 aa12□□□□□ -0.49
MCF2L-209ENST00000397036 PELI1Q96FA3 418 aa12□□□□□ -0.49
MCF2L-209ENST00000397036 TRIB1Q96RU8 372 aa12□□□□□ -0.49
MCF2L-209ENST00000397036 CDADC1Q9BWV3 514 aa12□□□□□ -0.49
MCF2L-209ENST00000397036 RBM24Q9BX46 236 aaKnown RBP12□□□□□ -0.49
MCF2L-209ENST00000397036 C1orf198Q9H425 327 aa12□□□□□ -0.49
MCF2L-209ENST00000397036 SEC61A2Q9H9S3 476 aa12□□□□□ -0.49
MCF2L-209ENST00000397036 CRLF2Q9HC73 371 aa12□□□□□ -0.49
MCF2L-209ENST00000397036 MRM2Q9UI43 246 aaKnown RBP12□□□□□ -0.49
MCF2L-209ENST00000397036 ZNF835Q9Y2P0 537 aa12□□□□□ -0.49
MCF2L-209ENST00000397036 KLHDC2Q9Y2U9 406 aa12□□□□□ -0.49
MCF2L-209ENST00000397036 SF3B6Q9Y3B4 125 aaKnown RBP12□□□□□ -0.49
MCF2L-209ENST00000397036 ARPC4-TTLL3A0A0A6YYG9 625 aa11.99□□□□□ -0.49
MCF2L-209ENST00000397036 A0A1W2PPL8 197 aa11.99□□□□□ -0.49
MCF2L-209ENST00000397036 ERVH48-1M5A8F1 160 aa11.99□□□□□ -0.49
MCF2L-209ENST00000397036 SPARCP09486 303 aa11.99□□□□□ -0.49
MCF2L-209ENST00000397036 PSMA1P25786 263 aaKnown RBP11.99□□□□□ -0.49
MCF2L-209ENST00000397036 GABRA5P31644 462 aa11.99□□□□□ -0.49
MCF2L-209ENST00000397036 TIMP3P35625 211 aa11.99□□□□□ -0.49
MCF2L-209ENST00000397036 HIST1H3AP68431 136 aa11.99□□□□□ -0.49
MCF2L-209ENST00000397036 TRAM1Q15629 374 aa11.99□□□□□ -0.49
MCF2L-209ENST00000397036 CTF1Q16619 201 aa11.99□□□□□ -0.49
MCF2L-209ENST00000397036 MEP1BQ16820 701 aa11.99□□□□□ -0.49
MCF2L-209ENST00000397036 HIST2H3PS2Q5TEC6 136 aa11.99□□□□□ -0.49
MCF2L-209ENST00000397036 DMKNQ6E0U4 476 aaPredicted RBP11.99□□□□□ -0.49
MCF2L-209ENST00000397036 RPL22L1Q6P5R6 122 aaKnown RBP11.99□□□□□ -0.49
MCF2L-209ENST00000397036 CD200R1LQ6Q8B3 271 aa11.99□□□□□ -0.49
MCF2L-209ENST00000397036 HIST2H3AQ71DI3 136 aa11.99□□□□□ -0.49
MCF2L-209ENST00000397036 NUFIP2Q7Z417 695 aaKnown RBP11.99□□□□□ -0.49
MCF2L-209ENST00000397036 KLBQ86Z14 1044 aa11.99□□□□□ -0.49
MCF2L-209ENST00000397036 RFLNBQ8N5W9 214 aa11.99□□□□□ -0.49
MCF2L-209ENST00000397036 OR5M9Q8NGP3 310 aa11.99□□□□□ -0.49
MCF2L-209ENST00000397036 MROQ9BYG7 248 aa11.99□□□□□ -0.49
MCF2L-209ENST00000397036 NIPAL2Q9H841 368 aa11.99□□□□□ -0.49
MCF2L-209ENST00000397036 SLC7A10Q9NS82 523 aa11.99□□□□□ -0.49
MCF2L-209ENST00000397036 TMEM38BQ9NVV0 291 aa11.99□□□□□ -0.49
MCF2L-209ENST00000397036 LUZP4Q9P127 313 aa11.99□□□□□ -0.49
MCF2L-209ENST00000397036 MALT1Q9UDY8 824 aa11.99□□□□□ -0.49
MCF2L-209ENST00000397036 EMC9Q9Y3B6 208 aa11.99□□□□□ -0.49
MCF2L-209ENST00000397036 LHFPL6Q9Y693 200 aa11.99□□□□□ -0.49
MCF2L-209ENST00000397036 PRRC2CQ9Y520 2896 aaKnown RBP11.99□□□□□ -0.49
MCF2L-209ENST00000397036 PRR32B1ATL7 298 aa11.98□□□□□ -0.49
MCF2L-209ENST00000397036 NOL3O60936 208 aaKnown RBP11.98□□□□□ -0.49
MCF2L-209ENST00000397036 CST2P09228 141 aa11.98□□□□□ -0.49
MCF2L-209ENST00000397036 PSKH1P11801 424 aa11.98□□□□□ -0.49
MCF2L-209ENST00000397036 CDAP32320 146 aa11.98□□□□□ -0.49
MCF2L-209ENST00000397036 ROR2Q01974 943 aaKnown RBP11.98□□□□□ -0.49
MCF2L-209ENST00000397036 EIF2B1Q14232 305 aaKnown RBP11.98□□□□□ -0.49
MCF2L-209ENST00000397036 CEACAM16Q2WEN9 425 aa11.98□□□□□ -0.49
MCF2L-209ENST00000397036 TP53I3Q53FA7 332 aa11.98□□□□□ -0.49
MCF2L-209ENST00000397036 LIPNQ5VXI9 398 aa11.98□□□□□ -0.49
MCF2L-209ENST00000397036 FBXW9Q5XUX1 488 aa11.98□□□□□ -0.49
MCF2L-209ENST00000397036 ZNF585AQ6P3V2 769 aa11.98□□□□□ -0.49
MCF2L-209ENST00000397036 PLXDC2Q6UX71 529 aa11.98□□□□□ -0.49
MCF2L-209ENST00000397036 LINGO2Q7L985 606 aa11.98□□□□□ -0.49
MCF2L-209ENST00000397036 FAM220AQ7Z4H9 259 aa11.98□□□□□ -0.49
MCF2L-209ENST00000397036 DCXRQ7Z4W1 244 aa11.98□□□□□ -0.49
MCF2L-209ENST00000397036 ZNF100Q8IYN0 542 aa11.98□□□□□ -0.49
MCF2L-209ENST00000397036 MS4A15Q8N5U1 240 aa11.98□□□□□ -0.49
MCF2L-209ENST00000397036 OR6K3Q8NGY3 331 aa11.98□□□□□ -0.49
MCF2L-209ENST00000397036 OR2AJ1Q8NGZ0 328 aa11.98□□□□□ -0.49
MCF2L-209ENST00000397036 RNF166Q96A37 237 aaPredicted RBP11.98□□□□□ -0.49
MCF2L-209ENST00000397036 ZNF837Q96EG3 531 aaPredicted RBP11.98□□□□□ -0.49
MCF2L-209ENST00000397036 FOXN4Q96NZ1 517 aa11.98□□□□□ -0.49
MCF2L-209ENST00000397036 FOXB1Q99853 325 aa11.98□□□□□ -0.49
MCF2L-209ENST00000397036 ST6GALNAC2Q9UJ37 374 aa11.98□□□□□ -0.49
MCF2L-209ENST00000397036 CLEC4AQ9UMR7 237 aa11.98□□□□□ -0.49
MCF2L-209ENST00000397036 PKD1L2Q7Z442 2459 aa11.98□□□□□ -0.49
MCF2L-209ENST00000397036 RP1L1Q8IWN7 2480 aaPredicted RBP11.97□□□□□ -0.49
MCF2L-209ENST00000397036 CCDC160A6NGH7 325 aa11.97□□□□□ -0.49
MCF2L-209ENST00000397036 ZNF587BE7ETH6 402 aa11.97□□□□□ -0.49
MCF2L-209ENST00000397036 SLC22A1O15245 554 aa11.97□□□□□ -0.49
MCF2L-209ENST00000397036 GPRIN2O60269 458 aa11.97□□□□□ -0.49
MCF2L-209ENST00000397036 KRT33AO76009 404 aa11.97□□□□□ -0.49
MCF2L-209ENST00000397036 EDN3P14138 238 aa11.97□□□□□ -0.49
MCF2L-209ENST00000397036 CELP19835 753 aa11.97□□□□□ -0.49
MCF2L-209ENST00000397036 CTSSP25774 331 aa11.97□□□□□ -0.49
MCF2L-209ENST00000397036 OPRL1P41146 370 aa11.97□□□□□ -0.49
MCF2L-209ENST00000397036 RPS27P42677 84 aaKnown RBP11.97□□□□□ -0.49
MCF2L-209ENST00000397036 CRYBB2P43320 205 aa11.97□□□□□ -0.49
MCF2L-209ENST00000397036 KIR2DL2P43627 348 aaPredicted RBP11.97□□□□□ -0.49
MCF2L-209ENST00000397036 CCR9P51686 369 aa11.97□□□□□ -0.49
MCF2L-209ENST00000397036 SH3BGRP55822 239 aaPredicted RBP11.97□□□□□ -0.49
MCF2L-209ENST00000397036 AQP6Q13520 282 aa11.97□□□□□ -0.49
MCF2L-209ENST00000397036 ENDOGQ14249 297 aaKnown RBP11.97□□□□□ -0.49
MCF2L-209ENST00000397036 CDK5R1Q15078 307 aa11.97□□□□□ -0.49
MCF2L-209ENST00000397036 SGCAQ16586 387 aa11.97□□□□□ -0.49
MCF2L-209ENST00000397036 C1orf185Q5T7R7 199 aa11.97□□□□□ -0.49
MCF2L-209ENST00000397036 LIPKQ5VXJ0 399 aa11.97□□□□□ -0.49
MCF2L-209ENST00000397036 RTL6Q6ICC9 239 aa11.97□□□□□ -0.49
MCF2L-209ENST00000397036 C9orf106Q8NAJ2 232 aa11.97□□□□□ -0.49
MCF2L-209ENST00000397036 GJC3Q8NFK1 279 aa11.97□□□□□ -0.49
MCF2L-209ENST00000397036 C12orf43Q96C57 262 aaKnown RBP11.97□□□□□ -0.49
MCF2L-209ENST00000397036 BOD1Q96IK1 185 aa11.97□□□□□ -0.49
MCF2L-209ENST00000397036 AMELYQ99218 206 aa11.97□□□□□ -0.49
MCF2L-209ENST00000397036 ZNF416Q9BWM5 594 aa11.97□□□□□ -0.49
MCF2L-209ENST00000397036 NAA50Q9GZZ1 169 aaKnown RBP11.97□□□□□ -0.49
MCF2L-209ENST00000397036 TP63Q9H3D4 680 aaPredicted RBP11.97□□□□□ -0.49
MCF2L-209ENST00000397036 ELOVL3Q9HB03 270 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms