RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 ATG5Q9H1Y0 275 aa12□□□□□ -0.49
TRIM40-207ENST00000396581 KCNK15Q9H427 330 aa12□□□□□ -0.49
TRIM40-207ENST00000396581 TAS2R3Q9NYW6 316 aa12□□□□□ -0.49
TRIM40-207ENST00000396581 TP53BP1Q12888 1972 aaPredicted RBP12□□□□□ -0.49
TRIM40-207ENST00000396581 KANTRA0A1W2PQU2 76 aa11.99□□□□□ -0.49
TRIM40-207ENST00000396581 RAB19A4D1S5 217 aa11.99□□□□□ -0.49
TRIM40-207ENST00000396581 BLACEA4D250 179 aa11.99□□□□□ -0.49
TRIM40-207ENST00000396581 MTRF1O75570 445 aaKnown RBP11.99□□□□□ -0.49
TRIM40-207ENST00000396581 CCKBRP32239 447 aa11.99□□□□□ -0.49
TRIM40-207ENST00000396581 PPIAP62937 165 aaKnown RBP11.99□□□□□ -0.49
TRIM40-207ENST00000396581 MC2RQ01718 297 aa11.99□□□□□ -0.49
TRIM40-207ENST00000396581 ROM1Q03395 351 aa11.99□□□□□ -0.49
TRIM40-207ENST00000396581 FZD2Q14332 565 aa11.99□□□□□ -0.49
TRIM40-207ENST00000396581 KCNAB1Q14722 419 aa11.99□□□□□ -0.49
TRIM40-207ENST00000396581 GRM7Q14831 915 aa11.99□□□□□ -0.49
TRIM40-207ENST00000396581 CD226Q15762 336 aa11.99□□□□□ -0.49
TRIM40-207ENST00000396581 PAN3Q58A45 887 aaKnown RBP11.99□□□□□ -0.49
TRIM40-207ENST00000396581 FAM74A1Q5RGS3 127 aa11.99□□□□□ -0.49
TRIM40-207ENST00000396581 SHEQ5VZ18 495 aa11.99□□□□□ -0.49
TRIM40-207ENST00000396581 SPEM1Q8N4L4 309 aa11.99□□□□□ -0.49
TRIM40-207ENST00000396581 ZNF615Q8N8J6 731 aa11.99□□□□□ -0.49
TRIM40-207ENST00000396581 OR13C8Q8NGS7 320 aa11.99□□□□□ -0.49
TRIM40-207ENST00000396581 TSEN15Q8WW01 171 aaKnown RBP11.99□□□□□ -0.49
TRIM40-207ENST00000396581 TPSD1Q9BZJ3 242 aa11.99□□□□□ -0.49
TRIM40-207ENST00000396581 KCNG2Q9UJ96 466 aa11.99□□□□□ -0.49
TRIM40-207ENST00000396581 HEATR5AQ86XA9 2040 aa11.99□□□□□ -0.49
TRIM40-207ENST00000396581 COL6A3P12111 3177 aa11.99□□□□□ -0.49
TRIM40-207ENST00000396581 H7C1C5 153 aa11.99□□□□□ -0.49
TRIM40-207ENST00000396581 TNFP01375 233 aa11.99□□□□□ -0.49
TRIM40-207ENST00000396581 IL2RAP01589 272 aa11.99□□□□□ -0.49
TRIM40-207ENST00000396581 CLPSP04118 112 aa11.99□□□□□ -0.49
TRIM40-207ENST00000396581 THEGLP0DJG4 465 aa11.99□□□□□ -0.49
TRIM40-207ENST00000396581 RPS27P42677 84 aaKnown RBP11.99□□□□□ -0.49
TRIM40-207ENST00000396581 LCN6P62502 163 aa11.99□□□□□ -0.49
TRIM40-207ENST00000396581 UBE2IP63279 158 aaKnown RBP11.99□□□□□ -0.49
TRIM40-207ENST00000396581 TMEM225Q6GV28 225 aa11.99□□□□□ -0.49
TRIM40-207ENST00000396581 ACOT7LQ6ZUV0 252 aa11.99□□□□□ -0.49
TRIM40-207ENST00000396581 OR2W3Q7Z3T1 314 aa11.99□□□□□ -0.49
TRIM40-207ENST00000396581 ZNF679Q8IYX0 411 aa11.99□□□□□ -0.49
TRIM40-207ENST00000396581 OR1J2Q8NGS2 313 aa11.99□□□□□ -0.49
TRIM40-207ENST00000396581 PTX4Q96A99 478 aa11.99□□□□□ -0.49
TRIM40-207ENST00000396581 TINAGL1Q9GZM7 467 aaPredicted RBP11.99□□□□□ -0.49
TRIM40-207ENST00000396581 PCED1AQ9H1Q7 454 aa11.99□□□□□ -0.49
TRIM40-207ENST00000396581 OR10A5Q9H207 317 aa11.99□□□□□ -0.49
TRIM40-207ENST00000396581 SYT4Q9H2B2 425 aa11.99□□□□□ -0.49
TRIM40-207ENST00000396581 ELOVL3Q9HB03 270 aa11.99□□□□□ -0.49
TRIM40-207ENST00000396581 PRMT8Q9NR22 394 aaPredicted RBP11.99□□□□□ -0.49
TRIM40-207ENST00000396581 STARD5Q9NSY2 213 aa11.99□□□□□ -0.49
TRIM40-207ENST00000396581 METTL12A8MUP2 240 aa11.98□□□□□ -0.49
TRIM40-207ENST00000396581 OIP5O43482 229 aa11.98□□□□□ -0.49
TRIM40-207ENST00000396581 ALOX12BO75342 701 aa11.98□□□□□ -0.49
TRIM40-207ENST00000396581 ATG12O94817 140 aa11.98□□□□□ -0.49
TRIM40-207ENST00000396581 AMY2AP04746 511 aa11.98□□□□□ -0.49
TRIM40-207ENST00000396581 RNH1P13489 461 aaKnown RBP11.98□□□□□ -0.49
TRIM40-207ENST00000396581 CD34P28906 385 aa11.98□□□□□ -0.49
TRIM40-207ENST00000396581 STARP49675 285 aa11.98□□□□□ -0.49
TRIM40-207ENST00000396581 LUMP51884 338 aaPredicted RBP11.98□□□□□ -0.49
TRIM40-207ENST00000396581 SNTB1Q13884 538 aaKnown RBP11.98□□□□□ -0.49
TRIM40-207ENST00000396581 MEP1BQ16820 701 aa11.98□□□□□ -0.49
TRIM40-207ENST00000396581 LRRC69Q6ZNQ3 347 aa11.98□□□□□ -0.49
TRIM40-207ENST00000396581 TAF8Q7Z7C8 310 aa11.98□□□□□ -0.49
TRIM40-207ENST00000396581 CCDC36Q8IYA8 594 aa11.98□□□□□ -0.49
TRIM40-207ENST00000396581 C10orf53Q8N6V4 93 aa11.98□□□□□ -0.49
TRIM40-207ENST00000396581 CADM4Q8NFZ8 388 aa11.98□□□□□ -0.49
TRIM40-207ENST00000396581 ASB5Q8WWX0 329 aa11.98□□□□□ -0.49
TRIM40-207ENST00000396581 ZNF524Q96C55 264 aa11.98□□□□□ -0.49
TRIM40-207ENST00000396581 KTI12Q96EK9 354 aaPredicted RBP11.98□□□□□ -0.49
TRIM40-207ENST00000396581 ADAM19Q9H013 955 aa11.98□□□□□ -0.49
TRIM40-207ENST00000396581 HPF1Q9NWY4 346 aa11.98□□□□□ -0.49
TRIM40-207ENST00000396581 NDRG3Q9UGV2 375 aa11.98□□□□□ -0.49
TRIM40-207ENST00000396581 OR10H1Q9Y4A9 318 aa11.98□□□□□ -0.49
TRIM40-207ENST00000396581 SLCO1B1Q9Y6L6 691 aa11.98□□□□□ -0.49
TRIM40-207ENST00000396581 LOC390937A0A1W2PQ73 354 aa11.98□□□□□ -0.49
TRIM40-207ENST00000396581 OR14I1A6ND48 311 aa11.98□□□□□ -0.49
TRIM40-207ENST00000396581 C19orf67A6NJJ6 358 aa11.98□□□□□ -0.49
TRIM40-207ENST00000396581 PNPP00491 289 aa11.98□□□□□ -0.49
TRIM40-207ENST00000396581 PLATP00750 562 aa11.98□□□□□ -0.49
TRIM40-207ENST00000396581 ZBTB25P24278 435 aa11.98□□□□□ -0.49
TRIM40-207ENST00000396581 HTR2CP28335 458 aa11.98□□□□□ -0.49
TRIM40-207ENST00000396581 DEFA5Q01523 94 aa11.98□□□□□ -0.49
TRIM40-207ENST00000396581 NNATQ16517 81 aa11.98□□□□□ -0.49
TRIM40-207ENST00000396581 ODF4Q2M2E3 257 aa11.98□□□□□ -0.49
TRIM40-207ENST00000396581 PRTGQ2VWP7 1150 aa11.98□□□□□ -0.49
TRIM40-207ENST00000396581 PHF19Q5T6S3 580 aa11.98□□□□□ -0.49
TRIM40-207ENST00000396581 SLC25A42Q86VD7 318 aa11.98□□□□□ -0.49
TRIM40-207ENST00000396581 LYPD6Q86Y78 171 aa11.98□□□□□ -0.49
TRIM40-207ENST00000396581 KLHDC7BQ96G42 594 aa11.98□□□□□ -0.49
TRIM40-207ENST00000396581 DGAT2Q96PD7 388 aa11.98□□□□□ -0.49
TRIM40-207ENST00000396581 ZNF587Q96SQ5 575 aaPredicted RBP11.98□□□□□ -0.49
TRIM40-207ENST00000396581 VRK1Q99986 396 aaPredicted RBP11.98□□□□□ -0.49
TRIM40-207ENST00000396581 CCDC3Q9BQI4 270 aa11.98□□□□□ -0.49
TRIM40-207ENST00000396581 TCEAL2Q9H3H9 227 aaPredicted RBP11.98□□□□□ -0.49
TRIM40-207ENST00000396581 SEMA6CQ9H3T2 930 aa11.98□□□□□ -0.49
TRIM40-207ENST00000396581 TMEM185BQ9H7F4 350 aa11.98□□□□□ -0.49
TRIM40-207ENST00000396581 FAM60AQ9NP50 221 aa11.98□□□□□ -0.49
TRIM40-207ENST00000396581 UBQLN4Q9NRR5 601 aa11.98□□□□□ -0.49
TRIM40-207ENST00000396581 HRASLS2Q9NWW9 162 aa11.98□□□□□ -0.49
TRIM40-207ENST00000396581 PLEKHA6Q9Y2H5 1048 aa11.98□□□□□ -0.49
TRIM40-207ENST00000396581 VCANP13611 3396 aa11.97□□□□□ -0.49
TRIM40-207ENST00000396581 ZNF736B4DX44 427 aaPredicted RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms