RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 DLK2Q6UY11 383 aa12.85□□□□□ -0.35
COL4A3-202ENST00000396578 LYSMD1Q96S90 227 aa12.85□□□□□ -0.35
COL4A3-202ENST00000396578 CDCA3Q99618 268 aaPredicted RBP12.85□□□□□ -0.35
COL4A3-202ENST00000396578 COL1A1P02452 1464 aaPredicted RBP12.85□□□□□ -0.35
COL4A3-202ENST00000396578 EFSO43281 561 aa12.85□□□□□ -0.35
COL4A3-202ENST00000396578 MT-ATP6P00846 226 aa12.85□□□□□ -0.35
COL4A3-202ENST00000396578 IGHEP01854 428 aa12.85□□□□□ -0.35
COL4A3-202ENST00000396578 CDKN3Q16667 212 aa12.85□□□□□ -0.35
COL4A3-202ENST00000396578 PRAMEF20Q5VT98 475 aa12.85□□□□□ -0.35
COL4A3-202ENST00000396578 OR13D1Q8NGV5 346 aa12.85□□□□□ -0.35
COL4A3-202ENST00000396578 RASD2Q96D21 266 aa12.85□□□□□ -0.35
COL4A3-202ENST00000396578 CHRDL1Q9BU40 450 aa12.85□□□□□ -0.35
COL4A3-202ENST00000396578 BARX1Q9HBU1 254 aaPredicted RBP12.85□□□□□ -0.35
COL4A3-202ENST00000396578 RPS19P39019 145 aaKnown RBP12.85□□□□□ -0.35
COL4A3-202ENST00000396578 DCDP81605 110 aaKnown RBP12.85□□□□□ -0.35
COL4A3-202ENST00000396578 OR2AE1Q8NHA4 323 aa12.85□□□□□ -0.35
COL4A3-202ENST00000396578 PIGTQ969N2 578 aa12.85□□□□□ -0.35
COL4A3-202ENST00000396578 H3BQ06 376 aaPredicted RBP12.85□□□□□ -0.35
COL4A3-202ENST00000396578 SCRG1O75711 98 aa12.85□□□□□ -0.35
COL4A3-202ENST00000396578 GRPP07492 148 aa12.85□□□□□ -0.35
COL4A3-202ENST00000396578 POLR2IP36954 125 aaKnown RBP12.85□□□□□ -0.35
COL4A3-202ENST00000396578 MAT1AQ00266 395 aaKnown RBP12.85□□□□□ -0.35
COL4A3-202ENST00000396578 NANOGP1Q8N7R0 232 aa12.85□□□□□ -0.35
COL4A3-202ENST00000396578 CEBPBP17676 345 aa12.84□□□□□ -0.35
COL4A3-202ENST00000396578 BADQ92934 168 aa12.84□□□□□ -0.35
COL4A3-202ENST00000396578 HEXAP06865 529 aa12.84□□□□□ -0.35
COL4A3-202ENST00000396578 C1SP09871 688 aa12.84□□□□□ -0.35
COL4A3-202ENST00000396578 ZNF574Q6ZN55 896 aaPredicted RBP12.84□□□□□ -0.35
COL4A3-202ENST00000396578 FAM174AQ8TBP5 190 aa12.84□□□□□ -0.35
COL4A3-202ENST00000396578 GAREM1Q9H706 876 aa12.84□□□□□ -0.35
COL4A3-202ENST00000396578 A0A1B0GWA3 101 aa12.84□□□□□ -0.35
COL4A3-202ENST00000396578 RFPL4AA6NLU0 287 aa12.84□□□□□ -0.35
COL4A3-202ENST00000396578 RFPL4AL1F8VTS6 287 aa12.84□□□□□ -0.35
COL4A3-202ENST00000396578 USF1P22415 310 aaPredicted RBP12.84□□□□□ -0.35
COL4A3-202ENST00000396578 REEP5Q00765 189 aa12.84□□□□□ -0.35
COL4A3-202ENST00000396578 TCEAL8Q8IYN2 117 aa12.84□□□□□ -0.35
COL4A3-202ENST00000396578 LILRA2Q8N149 483 aa12.84□□□□□ -0.35
COL4A3-202ENST00000396578 ZNF561Q8N587 486 aa12.84□□□□□ -0.35
COL4A3-202ENST00000396578 ZNF583Q96ND8 569 aa12.84□□□□□ -0.35
COL4A3-202ENST00000396578 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.84□□□□□ -0.35
COL4A3-202ENST00000396578 CACNA1SQ13698 1873 aa12.84□□□□□ -0.35
COL4A3-202ENST00000396578 GPR171O14626 319 aa12.84□□□□□ -0.35
COL4A3-202ENST00000396578 HNRNPA3P51991 378 aaKnown RBP12.84□□□□□ -0.35
COL4A3-202ENST00000396578 HSF1Q00613 529 aa12.84□□□□□ -0.35
COL4A3-202ENST00000396578 IHHQ14623 411 aa12.84□□□□□ -0.35
COL4A3-202ENST00000396578 TMEM130Q8N3G9 435 aa12.84□□□□□ -0.35
COL4A3-202ENST00000396578 OR51H1Q8NH63 302 aa12.84□□□□□ -0.35
COL4A3-202ENST00000396578 PFN4Q8NHR9 129 aa12.84□□□□□ -0.35
COL4A3-202ENST00000396578 NDUFB11Q9NX14 153 aa12.84□□□□□ -0.35
COL4A3-202ENST00000396578 E5RGE8 158 aa12.84□□□□□ -0.35
COL4A3-202ENST00000396578 LIPAP38571 399 aa12.84□□□□□ -0.35
COL4A3-202ENST00000396578 USP51Q70EK9 711 aa12.84□□□□□ -0.35
COL4A3-202ENST00000396578 AMIGO3Q86WK7 504 aa12.84□□□□□ -0.35
COL4A3-202ENST00000396578 UCN3Q969E3 161 aa12.84□□□□□ -0.35
COL4A3-202ENST00000396578 FYTTD1Q96QD9 318 aaKnown RBP12.84□□□□□ -0.35
COL4A3-202ENST00000396578 TUBB1Q9H4B7 451 aa12.84□□□□□ -0.35
COL4A3-202ENST00000396578 NSG2Q9Y328 171 aa12.84□□□□□ -0.35
COL4A3-202ENST00000396578 ZNF26P17031 533 aaPredicted RBP12.84□□□□□ -0.35
COL4A3-202ENST00000396578 SLC6A11P48066 632 aa12.84□□□□□ -0.35
COL4A3-202ENST00000396578 ASB13Q8WXK3 278 aa12.84□□□□□ -0.35
COL4A3-202ENST00000396578 ISL2Q96A47 359 aa12.84□□□□□ -0.35
COL4A3-202ENST00000396578 LMAN1LQ9HAT1 526 aa12.84□□□□□ -0.35
COL4A3-202ENST00000396578 PPP1R3CQ9UQK1 317 aa12.84□□□□□ -0.35
COL4A3-202ENST00000396578 ALOX5APP20292 161 aa12.84□□□□□ -0.35
COL4A3-202ENST00000396578 PSMB6P28072 239 aa12.84□□□□□ -0.35
COL4A3-202ENST00000396578 TEAD1P28347 426 aa12.84□□□□□ -0.35
COL4A3-202ENST00000396578 FCGR2CP31995 323 aa12.84□□□□□ -0.35
COL4A3-202ENST00000396578 Q1RN00 199 aa12.84□□□□□ -0.35
COL4A3-202ENST00000396578 BCDIN3DQ7Z5W3 292 aaKnown RBP12.84□□□□□ -0.35
COL4A3-202ENST00000396578 TMEM123Q8N131 208 aa12.84□□□□□ -0.35
COL4A3-202ENST00000396578 TMEM43Q9BTV4 400 aa12.84□□□□□ -0.35
COL4A3-202ENST00000396578 GLIPR2Q9H4G4 154 aa12.84□□□□□ -0.35
COL4A3-202ENST00000396578 LIN7CQ9NUP9 197 aaKnown RBP12.84□□□□□ -0.35
COL4A3-202ENST00000396578 HCFC1R1Q9NWW0 138 aa12.84□□□□□ -0.35
COL4A3-202ENST00000396578 KIAA1456Q9P272 454 aa12.84□□□□□ -0.35
COL4A3-202ENST00000396578 FLVCR1Q9Y5Y0 555 aa12.84□□□□□ -0.35
COL4A3-202ENST00000396578 PRAMEF25A6NGN4 478 aa12.83□□□□□ -0.35
COL4A3-202ENST00000396578 FUCA1P04066 466 aa12.83□□□□□ -0.35
COL4A3-202ENST00000396578 CLLU1OSQ5K130 101 aa12.83□□□□□ -0.35
COL4A3-202ENST00000396578 PRAMEF5Q5TYX0 476 aa12.83□□□□□ -0.35
COL4A3-202ENST00000396578 PRAMEF6Q5VXH4 476 aa12.83□□□□□ -0.35
COL4A3-202ENST00000396578 BOD1Q96IK1 185 aa12.83□□□□□ -0.35
COL4A3-202ENST00000396578 BANF2Q9H503 90 aa12.83□□□□□ -0.35
COL4A3-202ENST00000396578 CGGBP1Q9UFW8 167 aaPredicted RBP12.83□□□□□ -0.35
COL4A3-202ENST00000396578 ABCD4O14678 606 aa12.83□□□□□ -0.36
COL4A3-202ENST00000396578 GJB3O75712 270 aa12.83□□□□□ -0.36
COL4A3-202ENST00000396578 CD38P28907 300 aa12.83□□□□□ -0.36
COL4A3-202ENST00000396578 RRADP55042 308 aa12.83□□□□□ -0.36
COL4A3-202ENST00000396578 TIGITQ495A1 244 aa12.83□□□□□ -0.36
COL4A3-202ENST00000396578 TCTE3Q8IZS6 198 aa12.83□□□□□ -0.36
COL4A3-202ENST00000396578 KIR2DL3P43628 341 aa12.83□□□□□ -0.36
COL4A3-202ENST00000396578 SPANXN5Q5MJ07 72 aa12.83□□□□□ -0.36
COL4A3-202ENST00000396578 CLEC9AQ6UXN8 241 aa12.83□□□□□ -0.36
COL4A3-202ENST00000396578 CXorf36Q9H7Y0 433 aa12.83□□□□□ -0.36
COL4A3-202ENST00000396578 AQP7P3A6NL99 342 aa12.83□□□□□ -0.36
COL4A3-202ENST00000396578 MRPL19P49406 292 aaKnown RBP12.83□□□□□ -0.36
COL4A3-202ENST00000396578 OR10X1Q8NGY0 326 aa12.83□□□□□ -0.36
COL4A3-202ENST00000396578 LHX3Q9UBR4 397 aa12.83□□□□□ -0.36
COL4A3-202ENST00000396578 NME1P15531 152 aaKnown RBP12.83□□□□□ -0.36
COL4A3-202ENST00000396578 SOX18P35713 384 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms