RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 G3V3Y1 287 aa13.33□□□□□ -0.27
CBX3-202ENST00000396386 MASP2O00187 686 aa13.33□□□□□ -0.27
CBX3-202ENST00000396386 ZNF17P17021 662 aa13.33□□□□□ -0.27
CBX3-202ENST00000396386 LAP3P28838 519 aa13.33□□□□□ -0.27
CBX3-202ENST00000396386 CLDN12P56749 244 aa13.33□□□□□ -0.27
CBX3-202ENST00000396386 SCAND1P57086 179 aa13.33□□□□□ -0.27
CBX3-202ENST00000396386 DGCR2P98153 550 aa13.33□□□□□ -0.27
CBX3-202ENST00000396386 CBX3Q13185 183 aa13.33□□□□□ -0.27
CBX3-202ENST00000396386 CAMK2DQ13557 499 aa13.33□□□□□ -0.27
CBX3-202ENST00000396386 RNASE12Q5GAN4 147 aaKnown RBP13.33□□□□□ -0.27
CBX3-202ENST00000396386 TMPPEQ6ZT21 453 aa13.33□□□□□ -0.27
CBX3-202ENST00000396386 FCRLAQ7L513 359 aa13.33□□□□□ -0.27
CBX3-202ENST00000396386 DNAAF1Q8NEP3 725 aa13.33□□□□□ -0.27
CBX3-202ENST00000396386 OR6X1Q8NH79 312 aa13.33□□□□□ -0.27
CBX3-202ENST00000396386 RAB40AQ8WXH6 277 aa13.33□□□□□ -0.27
CBX3-202ENST00000396386 UPRTQ96BW1 309 aa13.33□□□□□ -0.27
CBX3-202ENST00000396386 SGCZQ96LD1 299 aa13.33□□□□□ -0.27
CBX3-202ENST00000396386 JSRP1Q96MG2 331 aaPredicted RBP13.33□□□□□ -0.27
CBX3-202ENST00000396386 ABCG5Q9H222 651 aa13.33□□□□□ -0.27
CBX3-202ENST00000396386 OR5V1Q9UGF6 321 aa13.33□□□□□ -0.27
CBX3-202ENST00000396386 FBXL3Q9UKT7 428 aa13.33□□□□□ -0.27
CBX3-202ENST00000396386 LOC102725191A0A1B0GVB3 256 aa13.33□□□□□ -0.28
CBX3-202ENST00000396386 PRR33A8MZF0 331 aa13.33□□□□□ -0.28
CBX3-202ENST00000396386 CD2P06729 351 aa13.33□□□□□ -0.28
CBX3-202ENST00000396386 ADRB1P08588 477 aa13.33□□□□□ -0.28
CBX3-202ENST00000396386 CD3GP09693 182 aa13.33□□□□□ -0.28
CBX3-202ENST00000396386 H2BFMP0C1H6 154 aa13.33□□□□□ -0.28
CBX3-202ENST00000396386 ZNF43P17038 809 aa13.33□□□□□ -0.28
CBX3-202ENST00000396386 AVPR2P30518 371 aa13.33□□□□□ -0.28
CBX3-202ENST00000396386 SSPNQ14714 243 aa13.33□□□□□ -0.28
CBX3-202ENST00000396386 TIGD3Q6B0B8 471 aa13.33□□□□□ -0.28
CBX3-202ENST00000396386 KRT74Q7RTS7 529 aa13.33□□□□□ -0.28
CBX3-202ENST00000396386 IZUMO1Q8IYV9 350 aa13.33□□□□□ -0.28
CBX3-202ENST00000396386 TOMM5Q8N4H5 51 aa13.33□□□□□ -0.28
CBX3-202ENST00000396386 UBASH3BQ8TF42 649 aa13.33□□□□□ -0.28
CBX3-202ENST00000396386 SMIM4Q8WVI0 70 aa13.33□□□□□ -0.28
CBX3-202ENST00000396386 RNF133Q8WVZ7 376 aa13.33□□□□□ -0.28
CBX3-202ENST00000396386 FARSAQ9Y285 508 aaKnown RBP13.33□□□□□ -0.28
CBX3-202ENST00000396386 EMC9Q9Y3B6 208 aa13.33□□□□□ -0.28
CBX3-202ENST00000396386 PCSK5Q92824 1860 aa13.32□□□□□ -0.28
CBX3-202ENST00000396386 TTLL8A6PVC2 850 aa13.32□□□□□ -0.28
CBX3-202ENST00000396386 CENPXA8MT69 81 aa13.32□□□□□ -0.28
CBX3-202ENST00000396386 ORC5O43913 435 aa13.32□□□□□ -0.28
CBX3-202ENST00000396386 FSTP19883 344 aa13.32□□□□□ -0.28
CBX3-202ENST00000396386 ACHEP22303 614 aa13.32□□□□□ -0.28
CBX3-202ENST00000396386 CFPP27918 469 aa13.32□□□□□ -0.28
CBX3-202ENST00000396386 SLC6A1P30531 599 aa13.32□□□□□ -0.28
CBX3-202ENST00000396386 DDOSTP39656 456 aa13.32□□□□□ -0.28
CBX3-202ENST00000396386 CLDN6P56747 220 aa13.32□□□□□ -0.28
CBX3-202ENST00000396386 RPS15P62841 145 aaKnown RBP13.32□□□□□ -0.28
CBX3-202ENST00000396386 Q0VFX4 171 aa13.32□□□□□ -0.28
CBX3-202ENST00000396386 TATDN3Q17R31 274 aa13.32□□□□□ -0.28
CBX3-202ENST00000396386 ZNF468Q5VIY5 522 aaPredicted RBP13.32□□□□□ -0.28
CBX3-202ENST00000396386 LINGO2Q7L985 606 aa13.32□□□□□ -0.28
CBX3-202ENST00000396386 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.32□□□□□ -0.28
CBX3-202ENST00000396386 OR6F1Q8NGZ6 308 aa13.32□□□□□ -0.28
CBX3-202ENST00000396386 SYNPRQ8TBG9 265 aa13.32□□□□□ -0.28
CBX3-202ENST00000396386 CREB3L1Q96BA8 519 aa13.32□□□□□ -0.28
CBX3-202ENST00000396386 GNRHR2Q96P88 292 aa13.32□□□□□ -0.28
CBX3-202ENST00000396386 MARVELD1Q9BSK0 173 aa13.32□□□□□ -0.28
CBX3-202ENST00000396386 CKLFQ9UBR5 152 aa13.32□□□□□ -0.28
CBX3-202ENST00000396386 STEAP1Q9UHE8 339 aa13.32□□□□□ -0.28
CBX3-202ENST00000396386 OR52A1Q9UKL2 312 aa13.32□□□□□ -0.28
CBX3-202ENST00000396386 POLR1DQ9Y2S0 133 aa13.32□□□□□ -0.28
CBX3-202ENST00000396386 R4GN57 208 aa13.32□□□□□ -0.28
CBX3-202ENST00000396386 MYO15AQ9UKN7 3530 aa13.32□□□□□ -0.28
CBX3-202ENST00000396386 LOC107986453A0A1B0GWG9 222 aa13.31□□□□□ -0.28
CBX3-202ENST00000396386 OR2M5A3KFT3 312 aa13.31□□□□□ -0.28
CBX3-202ENST00000396386 EIF1AYO14602 144 aaKnown RBP13.31□□□□□ -0.28
CBX3-202ENST00000396386 RAD1O60671 282 aa13.31□□□□□ -0.28
CBX3-202ENST00000396386 RAMP1O60894 148 aa13.31□□□□□ -0.28
CBX3-202ENST00000396386 CBR3O75828 277 aa13.31□□□□□ -0.28
CBX3-202ENST00000396386 P04436 131 aa13.31□□□□□ -0.28
CBX3-202ENST00000396386 NR2C1P13056 603 aa13.31□□□□□ -0.28
CBX3-202ENST00000396386 HLA-DMAP28067 261 aa13.31□□□□□ -0.28
CBX3-202ENST00000396386 ART1P52961 327 aa13.31□□□□□ -0.28
CBX3-202ENST00000396386 TBRG1Q3YBR2 411 aa13.31□□□□□ -0.28
CBX3-202ENST00000396386 SLC36A2Q495M3 483 aa13.31□□□□□ -0.28
CBX3-202ENST00000396386 ATAD3CQ5T2N8 411 aa13.31□□□□□ -0.28
CBX3-202ENST00000396386 BCL2L15Q5TBC7 163 aa13.31□□□□□ -0.28
CBX3-202ENST00000396386 CDCP2Q5VXM1 449 aa13.31□□□□□ -0.28
CBX3-202ENST00000396386 CARD17Q5XLA6 110 aa13.31□□□□□ -0.28
CBX3-202ENST00000396386 CORO6Q6QEF8 472 aa13.31□□□□□ -0.28
CBX3-202ENST00000396386 ZNF704Q6ZNC4 412 aaPredicted RBP13.31□□□□□ -0.28
CBX3-202ENST00000396386 SLC7A6Q92536 515 aa13.31□□□□□ -0.28
CBX3-202ENST00000396386 SLAMF6Q96DU3 332 aa13.31□□□□□ -0.28
CBX3-202ENST00000396386 S100A16Q96FQ6 103 aaKnown RBP13.31□□□□□ -0.28
CBX3-202ENST00000396386 C7orf50Q9BRJ6 194 aaKnown RBP13.31□□□□□ -0.28
CBX3-202ENST00000396386 G6PC2Q9NQR9 355 aa13.31□□□□□ -0.28
CBX3-202ENST00000396386 CENPMQ9NSP4 180 aa13.31□□□□□ -0.28
CBX3-202ENST00000396386 CYB5R1Q9UHQ9 305 aa13.31□□□□□ -0.28
CBX3-202ENST00000396386 HHLA2Q9UM44 414 aa13.31□□□□□ -0.28
CBX3-202ENST00000396386 ALG5Q9Y673 324 aa13.31□□□□□ -0.28
CBX3-202ENST00000396386 CCDC187A0A096LP49 1063 aa13.31□□□□□ -0.28
CBX3-202ENST00000396386 ZNF726A6NNF4 738 aa13.31□□□□□ -0.28
CBX3-202ENST00000396386 C9orf172C9J069 976 aa13.31□□□□□ -0.28
CBX3-202ENST00000396386 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.31□□□□□ -0.28
CBX3-202ENST00000396386 CDX4O14627 284 aaPredicted RBP13.31□□□□□ -0.28
CBX3-202ENST00000396386 ISG15P05161 165 aa13.31□□□□□ -0.28
CBX3-202ENST00000396386 SERPINA7P05543 415 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms