RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 SHISA8B8ZZ34 492 aa15.01□□□□□ -0.01
NUP50-202ENST00000396096 D6RAR5 112 aa15.01□□□□□ -0.01
NUP50-202ENST00000396096 PRAF2O60831 178 aa15.01□□□□□ -0.01
NUP50-202ENST00000396096 PEX14O75381 377 aa15.01□□□□□ -0.01
NUP50-202ENST00000396096 CFIP05156 583 aa15.01□□□□□ -0.01
NUP50-202ENST00000396096 CD2P06729 351 aa15.01□□□□□ -0.01
NUP50-202ENST00000396096 SYPP08247 313 aa15.01□□□□□ -0.01
NUP50-202ENST00000396096 ITGA5P08648 1049 aa15.01□□□□□ -0.01
NUP50-202ENST00000396096 ACHEP22303 614 aa15.01□□□□□ -0.01
NUP50-202ENST00000396096 RGS19P49795 217 aa15.01□□□□□ -0.01
NUP50-202ENST00000396096 GPR85P60893 370 aa15.01□□□□□ -0.01
NUP50-202ENST00000396096 PLA2G7Q13093 441 aa15.01□□□□□ -0.01
NUP50-202ENST00000396096 RAB11BQ15907 218 aa15.01□□□□□ -0.01
NUP50-202ENST00000396096 ZNF239Q16600 458 aaKnown RBP15.01□□□□□ -0.01
NUP50-202ENST00000396096 C3orf33Q6P1S2 294 aa15.01□□□□□ -0.01
NUP50-202ENST00000396096 DCXRQ7Z4W1 244 aa15.01□□□□□ -0.01
NUP50-202ENST00000396096 OR11G2Q8NGC1 345 aa15.01□□□□□ -0.01
NUP50-202ENST00000396096 GIMAP1Q8WWP7 306 aa15.01□□□□□ -0.01
NUP50-202ENST00000396096 PPP1R14AQ96A00 147 aa15.01□□□□□ -0.01
NUP50-202ENST00000396096 MRPL13Q9BYD1 178 aaKnown RBP15.01□□□□□ -0.01
NUP50-202ENST00000396096 FBXL3Q9UKT7 428 aa15.01□□□□□ -0.01
NUP50-202ENST00000396096 H3BML4 177 aa15□□□□□ -0.01
NUP50-202ENST00000396096 TMIGD3P0DMS9 266 aaPredicted RBP15□□□□□ -0.01
NUP50-202ENST00000396096 DUSP3P51452 185 aaPredicted RBP15□□□□□ -0.01
NUP50-202ENST00000396096 P2RY4P51582 365 aa15□□□□□ -0.01
NUP50-202ENST00000396096 SNTA1Q13424 505 aa15□□□□□ -0.01
NUP50-202ENST00000396096 ST3GAL2Q16842 350 aa15□□□□□ -0.01
NUP50-202ENST00000396096 TMEM255AQ5JRV8 349 aa15□□□□□ -0.01
NUP50-202ENST00000396096 LAMTOR1Q6IAA8 161 aa15□□□□□ -0.01
NUP50-202ENST00000396096 TMEM81Q6P7N7 255 aa15□□□□□ -0.01
NUP50-202ENST00000396096 ZNF704Q6ZNC4 412 aaPredicted RBP15□□□□□ -0.01
NUP50-202ENST00000396096 RNF133Q8WVZ7 376 aa15□□□□□ -0.01
NUP50-202ENST00000396096 UTP23Q9BRU9 249 aaKnown RBP15□□□□□ -0.01
NUP50-202ENST00000396096 PTTG3PQ9NZH4 202 aa15□□□□□ -0.01
NUP50-202ENST00000396096 MRPL15Q9P015 296 aaKnown RBP15□□□□□ -0.01
NUP50-202ENST00000396096 CKLFQ9UBR5 152 aa15□□□□□ -0.01
NUP50-202ENST00000396096 HHLA2Q9UM44 414 aa15□□□□□ -0.01
NUP50-202ENST00000396096 GTF2A1LQ9UNN4 478 aa15□□□□□ -0.01
NUP50-202ENST00000396096 CACNA1CQ13936 2221 aa15□□□□□ -0.01
NUP50-202ENST00000396096 LOC100289279A0A1B0GTE1 492 aa14.99□□□□□ -0.01
NUP50-202ENST00000396096 A0A1W2PQ72 361 aa14.99□□□□□ -0.01
NUP50-202ENST00000396096 GGT3PA6NGU5 568 aa14.99□□□□□ -0.01
NUP50-202ENST00000396096 H3BSH0 61 aa14.99□□□□□ -0.01
NUP50-202ENST00000396096 CTAG2O75638 210 aa14.99□□□□□ -0.01
NUP50-202ENST00000396096 SULT1A3P0DMM9 295 aa14.99□□□□□ -0.01
NUP50-202ENST00000396096 SULT1A4P0DMN0 295 aa14.99□□□□□ -0.01
NUP50-202ENST00000396096 ANXA3P12429 323 aa14.99□□□□□ -0.01
NUP50-202ENST00000396096 FKBP2P26885 142 aaKnown RBP14.99□□□□□ -0.01
NUP50-202ENST00000396096 ADH6P28332 368 aa14.99□□□□□ -0.01
NUP50-202ENST00000396096 POU3F4P49335 361 aa14.99□□□□□ -0.01
NUP50-202ENST00000396096 BIDP55957 195 aa14.99□□□□□ -0.01
NUP50-202ENST00000396096 ZFP36L1Q07352 338 aaKnown RBP14.99□□□□□ -0.01
NUP50-202ENST00000396096 GLT8D1Q68CQ7 371 aa14.99□□□□□ -0.01
NUP50-202ENST00000396096 OR51D1Q8NGF3 324 aa14.99□□□□□ -0.01
NUP50-202ENST00000396096 SLC25A43Q8WUT9 341 aaPredicted RBP14.99□□□□□ -0.01
NUP50-202ENST00000396096 SLC25A28Q96A46 364 aa14.99□□□□□ -0.01
NUP50-202ENST00000396096 FAM3DQ96BQ1 224 aa14.99□□□□□ -0.01
NUP50-202ENST00000396096 RBP7Q96R05 134 aa14.99□□□□□ -0.01
NUP50-202ENST00000396096 PRDM6Q9NQX0 595 aa14.99□□□□□ -0.01
NUP50-202ENST00000396096 GPN3Q9UHW5 284 aaPredicted RBP14.99□□□□□ -0.01
NUP50-202ENST00000396096 OR52A1Q9UKL2 312 aa14.99□□□□□ -0.01
NUP50-202ENST00000396096 CDV3Q9UKY7 258 aaKnown RBP14.99□□□□□ -0.01
NUP50-202ENST00000396096 EMC9Q9Y3B6 208 aa14.99□□□□□ -0.01
NUP50-202ENST00000396096 CHCHD2Q9Y6H1 151 aaPredicted RBP14.99□□□□□ -0.01
NUP50-202ENST00000396096 USP34Q70CQ2 3546 aa14.99□□□□□ -0.01
NUP50-202ENST00000396096 CIB4A0PJX0 185 aa14.99□□□□□ -0.01
NUP50-202ENST00000396096 MEGF11A6BM72 1044 aa14.99□□□□□ -0.01
NUP50-202ENST00000396096 H7C417 338 aa14.99□□□□□ -0.01
NUP50-202ENST00000396096 TP53I11O14683 189 aa14.99□□□□□ -0.01
NUP50-202ENST00000396096 TGM6O95932 706 aa14.99□□□□□ -0.01
NUP50-202ENST00000396096 PDGFBP01127 241 aaPredicted RBP14.99□□□□□ -0.01
NUP50-202ENST00000396096 ZNF28P17035 718 aa14.99□□□□□ -0.01
NUP50-202ENST00000396096 DCTDP32321 178 aa14.99□□□□□ -0.01
NUP50-202ENST00000396096 EIF1P41567 113 aaKnown RBP14.99□□□□□ -0.01
NUP50-202ENST00000396096 MMP16P51512 607 aa14.99□□□□□ -0.01
NUP50-202ENST00000396096 THEM4Q5T1C6 240 aa14.99□□□□□ -0.01
NUP50-202ENST00000396096 SFRP4Q6FHJ7 346 aaPredicted RBP14.99□□□□□ -0.01
NUP50-202ENST00000396096 FAM198BQ6UWH4 519 aa14.99□□□□□ -0.01
NUP50-202ENST00000396096 WDSUB1Q8N9V3 476 aa14.99□□□□□ -0.01
NUP50-202ENST00000396096 AGBL5Q8NDL9 886 aa14.99□□□□□ -0.01
NUP50-202ENST00000396096 LILRB4Q8NHJ6 448 aa14.99□□□□□ -0.01
NUP50-202ENST00000396096 GRPEL2Q8TAA5 225 aa14.99□□□□□ -0.01
NUP50-202ENST00000396096 ZC3H10Q96K80 434 aaKnown RBP14.99□□□□□ -0.01
NUP50-202ENST00000396096 ZNF700Q9H0M5 742 aa14.99□□□□□ -0.01
NUP50-202ENST00000396096 DIABLOQ9NR28 239 aa14.99□□□□□ -0.01
NUP50-202ENST00000396096 MTFP1Q9UDX5 166 aa14.99□□□□□ -0.01
NUP50-202ENST00000396096 FBXL2Q9UKC9 423 aa14.99□□□□□ -0.01
NUP50-202ENST00000396096 ING4Q9UNL4 249 aa14.99□□□□□ -0.01
NUP50-202ENST00000396096 KIF26BQ2KJY2 2108 aa14.99□□□□□ -0.01
NUP50-202ENST00000396096 IGHV1-45A0A0A0MS14 117 aa14.98□□□□□ -0.01
NUP50-202ENST00000396096 A0A1B0GUH1 482 aa14.98□□□□□ -0.01
NUP50-202ENST00000396096 A0A1B0GVI7 797 aa14.98□□□□□ -0.01
NUP50-202ENST00000396096 SMLR1H3BR10 107 aa14.98□□□□□ -0.01
NUP50-202ENST00000396096 FABP7O15540 132 aa14.98□□□□□ -0.01
NUP50-202ENST00000396096 RAD1O60671 282 aa14.98□□□□□ -0.01
NUP50-202ENST00000396096 CER1O95813 267 aa14.98□□□□□ -0.01
NUP50-202ENST00000396096 MECP2P51608 486 aaKnown RBP14.98□□□□□ -0.01
NUP50-202ENST00000396096 EFNB2P52799 333 aa14.98□□□□□ -0.01
NUP50-202ENST00000396096 BTBD16Q32M84 506 aa14.98□□□□□ -0.01
NUP50-202ENST00000396096 C2orf76Q3KRA6 126 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms