RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 NEIL3Q8TAT5 605 aa3.56□□□□□ -1.84
HMGB1P10-201ENST00000395823 UBA3Q8TBC4 463 aa3.56□□□□□ -1.84
HMGB1P10-201ENST00000395823 MRGPRFQ96AM1 343 aa3.56□□□□□ -1.84
HMGB1P10-201ENST00000395823 ANKRD9Q96BM1 317 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P10-201ENST00000395823 CERS2Q96G23 380 aa3.56□□□□□ -1.84
HMGB1P10-201ENST00000395823 CHID1Q9BWS9 393 aa3.56□□□□□ -1.84
HMGB1P10-201ENST00000395823 RAB1BQ9H0U4 201 aa3.56□□□□□ -1.84
HMGB1P10-201ENST00000395823 GOLPH3Q9H4A6 298 aa3.56□□□□□ -1.84
HMGB1P10-201ENST00000395823 UGT1A7Q9HAW7 530 aa3.56□□□□□ -1.84
HMGB1P10-201ENST00000395823 UGT1A8Q9HAW9 530 aa3.56□□□□□ -1.84
HMGB1P10-201ENST00000395823 SLC38A10Q9HBR0 1119 aa3.56□□□□□ -1.84
HMGB1P10-201ENST00000395823 MRM3Q9HC36 420 aaKnown RBP3.56□□□□□ -1.84
HMGB1P10-201ENST00000395823 ADAM22Q9P0K1 906 aa3.56□□□□□ -1.84
HMGB1P10-201ENST00000395823 XCL2Q9UBD3 114 aa3.56□□□□□ -1.84
HMGB1P10-201ENST00000395823 ENPP5Q9UJA9 477 aa3.56□□□□□ -1.84
HMGB1P10-201ENST00000395823 FLVCR2Q9UPI3 526 aa3.56□□□□□ -1.84
HMGB1P10-201ENST00000395823 MMP24Q9Y5R2 645 aa3.56□□□□□ -1.84
HMGB1P10-201ENST00000395823 PUS1Q9Y606 427 aaKnown RBP eCLIP3.56□□□□□ -1.84
HMGB1P10-201ENST00000395823 RAD50Q92878 1312 aa3.55□□□□□ -1.84
HMGB1P10-201ENST00000395823 TRBV9A0A0B4J1U6 114 aa3.55□□□□□ -1.84
HMGB1P10-201ENST00000395823 OR5K4A6NMS3 321 aa3.55□□□□□ -1.84
HMGB1P10-201ENST00000395823 ITGB1BP1O14713 200 aa3.55□□□□□ -1.84
HMGB1P10-201ENST00000395823 OCMP0CE72 109 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P10-201ENST00000395823 HOXB8P17481 243 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P10-201ENST00000395823 EIF2S2P20042 333 aaKnown RBP3.55□□□□□ -1.84
HMGB1P10-201ENST00000395823 IL32P24001 234 aa3.55□□□□□ -1.84
HMGB1P10-201ENST00000395823 COX7A1P24310 79 aa3.55□□□□□ -1.84
HMGB1P10-201ENST00000395823 LCN1P31025 176 aa3.55□□□□□ -1.84
HMGB1P10-201ENST00000395823 RBMXP38159 391 aaKnown RBP3.55□□□□□ -1.84
HMGB1P10-201ENST00000395823 AQP2P41181 271 aa3.55□□□□□ -1.84
HMGB1P10-201ENST00000395823 PPP1R2P41236 205 aa3.55□□□□□ -1.84
HMGB1P10-201ENST00000395823 POLR2GP62487 172 aaKnown RBP eCLIP3.55□□□□□ -1.84
HMGB1P10-201ENST00000395823 MRPS25P82663 173 aaKnown RBP3.55□□□□□ -1.84
HMGB1P10-201ENST00000395823 PAX5Q02548 391 aa3.55□□□□□ -1.84
HMGB1P10-201ENST00000395823 REG3AQ06141 175 aa3.55□□□□□ -1.84
HMGB1P10-201ENST00000395823 PIGHQ14442 188 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P10-201ENST00000395823 ZNF239Q16600 458 aaKnown RBP3.55□□□□□ -1.84
HMGB1P10-201ENST00000395823 SPINK14Q6IE38 97 aa3.55□□□□□ -1.84
HMGB1P10-201ENST00000395823 PPP1R2P3Q6NXS1 205 aa3.55□□□□□ -1.84
HMGB1P10-201ENST00000395823 CERS6Q6ZMG9 384 aa3.55□□□□□ -1.84
HMGB1P10-201ENST00000395823 NCCRP1Q6ZVX7 275 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P10-201ENST00000395823 P2RY8Q86VZ1 359 aa3.55□□□□□ -1.84
HMGB1P10-201ENST00000395823 NELFCDQ8IXH7 590 aa3.55□□□□□ -1.84
HMGB1P10-201ENST00000395823 TMEM61Q8N0U2 210 aa3.55□□□□□ -1.84
HMGB1P10-201ENST00000395823 IQCKQ8N0W5 287 aa3.55□□□□□ -1.84
HMGB1P10-201ENST00000395823 PNKDQ8N490 385 aa3.55□□□□□ -1.84
HMGB1P10-201ENST00000395823 EID2Q8N6I1 236 aa3.55□□□□□ -1.84
HMGB1P10-201ENST00000395823 CCDC112Q8NEF3 446 aa3.55□□□□□ -1.84
HMGB1P10-201ENST00000395823 PROKR2Q8NFJ6 384 aa3.55□□□□□ -1.84
HMGB1P10-201ENST00000395823 VN1R2Q8NFZ6 395 aa3.55□□□□□ -1.84
HMGB1P10-201ENST00000395823 OR8J2Q8NGG1 315 aa3.55□□□□□ -1.84
HMGB1P10-201ENST00000395823 RHEBL1Q8TAI7 183 aa3.55□□□□□ -1.84
HMGB1P10-201ENST00000395823 MARCH1Q8TCQ1 289 aa3.55□□□□□ -1.84
HMGB1P10-201ENST00000395823 CAPSLQ8WWF8 208 aa3.55□□□□□ -1.84
HMGB1P10-201ENST00000395823 STMN2Q93045 179 aa3.55□□□□□ -1.84
HMGB1P10-201ENST00000395823 TMEM54Q969K7 222 aa3.55□□□□□ -1.84
HMGB1P10-201ENST00000395823 LRRC58Q96CX6 371 aa3.55□□□□□ -1.84
HMGB1P10-201ENST00000395823 ANGPTL4Q9BY76 406 aa3.55□□□□□ -1.84
HMGB1P10-201ENST00000395823 HES7Q9BYE0 225 aa3.55□□□□□ -1.84
HMGB1P10-201ENST00000395823 ELOVL6Q9H5J4 265 aa3.55□□□□□ -1.84
HMGB1P10-201ENST00000395823 MRPL47Q9HD33 250 aaKnown RBP3.55□□□□□ -1.84
HMGB1P10-201ENST00000395823 CCL28Q9NRJ3 127 aa3.55□□□□□ -1.84
HMGB1P10-201ENST00000395823 PLSCR3Q9NRY6 295 aa3.55□□□□□ -1.84
HMGB1P10-201ENST00000395823 EXD2Q9NVH0 621 aa3.55□□□□□ -1.84
HMGB1P10-201ENST00000395823 LYARQ9NX58 379 aaKnown RBP3.55□□□□□ -1.84
HMGB1P10-201ENST00000395823 IL37Q9NZH6 218 aa3.55□□□□□ -1.84
HMGB1P10-201ENST00000395823 GGA2Q9UJY4 613 aa3.55□□□□□ -1.84
HMGB1P10-201ENST00000395823 RHBDD3Q9Y3P4 386 aa3.55□□□□□ -1.84
HMGB1P10-201ENST00000395823 ARAP1Q96P48 1450 aa3.54□□□□□ -1.84
HMGB1P10-201ENST00000395823 MGAT4DA6NG13 374 aa3.54□□□□□ -1.84
HMGB1P10-201ENST00000395823 OR6C70A6NIJ9 312 aa3.54□□□□□ -1.84
HMGB1P10-201ENST00000395823 GOLGA8JA6NMD2 632 aa3.54□□□□□ -1.84
HMGB1P10-201ENST00000395823 ZNF726A6NNF4 738 aa3.54□□□□□ -1.84
HMGB1P10-201ENST00000395823 SERPINE3A8MV23 424 aa3.54□□□□□ -1.84
HMGB1P10-201ENST00000395823 GOLGA8KD6RF30 607 aa3.54□□□□□ -1.84
HMGB1P10-201ENST00000395823 E7ENQ6 273 aa3.54□□□□□ -1.84
HMGB1P10-201ENST00000395823 GOLGA8RI6L899 631 aa3.54□□□□□ -1.84
HMGB1P10-201ENST00000395823 AIM2O14862 343 aa3.54□□□□□ -1.84
HMGB1P10-201ENST00000395823 MRPS12O15235 138 aaKnown RBP3.54□□□□□ -1.84
HMGB1P10-201ENST00000395823 KDELR3O43731 214 aa3.54□□□□□ -1.84
HMGB1P10-201ENST00000395823 MGRN1O60291 552 aa3.54□□□□□ -1.84
HMGB1P10-201ENST00000395823 MMP23AO75900 390 aa3.54□□□□□ -1.84
HMGB1P10-201ENST00000395823 SUPT7LO94864 414 aa3.54□□□□□ -1.84
HMGB1P10-201ENST00000395823 CLIC3O95833 236 aa3.54□□□□□ -1.84
HMGB1P10-201ENST00000395823 NQO2P16083 231 aa3.54□□□□□ -1.84
HMGB1P10-201ENST00000395823 GSTM3P21266 225 aa3.54□□□□□ -1.84
HMGB1P10-201ENST00000395823 GTF2E2P29084 291 aaKnown RBP3.54□□□□□ -1.84
HMGB1P10-201ENST00000395823 HMOX2P30519 316 aa3.54□□□□□ -1.84
HMGB1P10-201ENST00000395823 SUB1P53999 127 aaKnown RBP eCLIP3.54□□□□□ -1.84
HMGB1P10-201ENST00000395823 CRISP1P54107 249 aa3.54□□□□□ -1.84
HMGB1P10-201ENST00000395823 ZNF92Q03936 586 aa3.54□□□□□ -1.84
HMGB1P10-201ENST00000395823 KIAA0087Q14695 138 aa3.54□□□□□ -1.84
HMGB1P10-201ENST00000395823 PTPN20Q4JDL3 420 aa3.54□□□□□ -1.84
HMGB1P10-201ENST00000395823 PPM1LQ5SGD2 360 aa3.54□□□□□ -1.84
HMGB1P10-201ENST00000395823 CLVS2Q5SYC1 327 aa3.54□□□□□ -1.84
HMGB1P10-201ENST00000395823 THOC7Q6I9Y2 204 aaKnown RBP3.54□□□□□ -1.84
HMGB1P10-201ENST00000395823 CNIH2Q6PI25 160 aa3.54□□□□□ -1.84
HMGB1P10-201ENST00000395823 PLEKHG7Q6ZR37 379 aa3.54□□□□□ -1.84
HMGB1P10-201ENST00000395823 CYP4Z1Q86W10 505 aa3.54□□□□□ -1.84
HMGB1P10-201ENST00000395823 THOC6Q86W42 341 aaKnown RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms